RNA–Protein interactions for RNA: ENSMUST00000109081.8

Cdkl3-208, Transcript of Cyclin-dependent kinase-like 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cdkl3, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3-208ENSMUST00000109081 Gm16253D3Z167 63 aa11.04□□□□□ -0.64
Cdkl3-208ENSMUST00000109081 Rps28P62858 69 aaKnown RBP11.03□□□□□ -0.64
Cdkl3-208ENSMUST00000109081 Ryr3A2AGL3 4863 aa11.03□□□□□ -0.64
Cdkl3-208ENSMUST00000109081 Lrp1bQ9JI18 4599 aa11.01□□□□□ -0.65
Cdkl3-208ENSMUST00000109081 Spink8Q09TK9 105 aa10.99□□□□□ -0.65
Cdkl3-208ENSMUST00000109081 SvipQ3UZP4 77 aa10.99□□□□□ -0.65
Cdkl3-208ENSMUST00000109081 Samd13D3YUG0 102 aa10.97□□□□□ -0.65
Cdkl3-208ENSMUST00000109081 Gm2310J3QNJ2 377 aa10.96□□□□□ -0.66
Cdkl3-208ENSMUST00000109081 Mrpl55Q9CZ83 127 aa10.94□□□□□ -0.66
Cdkl3-208ENSMUST00000109081 A0A286YE49 62 aa10.93□□□□□ -0.66
Cdkl3-208ENSMUST00000109081 Smlr1J3QMJ4 66 aa10.88□□□□□ -0.67
Cdkl3-208ENSMUST00000109081 Spaca4Q80ZQ0 127 aa10.88□□□□□ -0.67
Cdkl3-208ENSMUST00000109081 Ryr2E9Q401 4966 aaKnown RBP10.87□□□□□ -0.67
Cdkl3-208ENSMUST00000109081 SnurfQ9WU12 71 aa10.87□□□□□ -0.67
Cdkl3-208ENSMUST00000109081 Fat2Q5F226 4351 aa10.87□□□□□ -0.67
Cdkl3-208ENSMUST00000109081 Igkv3-3A0A140T8Q0 119 aa10.84□□□□□ -0.67
Cdkl3-208ENSMUST00000109081 Dph3Q8K0W9 82 aa10.84□□□□□ -0.67
Cdkl3-208ENSMUST00000109081 Pet100P0DJE0 76 aa10.82□□□□□ -0.68
Cdkl3-208ENSMUST00000109081 RetnlbQ99P86 105 aa10.82□□□□□ -0.68
Cdkl3-208ENSMUST00000109081 Serp1Q9Z1W5 66 aa10.81□□□□□ -0.68
Cdkl3-208ENSMUST00000109081 Coa6Q8BGD8 79 aa10.8□□□□□ -0.68
Cdkl3-208ENSMUST00000109081 Brk1Q91VR8 75 aa10.8□□□□□ -0.68
Cdkl3-208ENSMUST00000109081 Defb12Q8K4N3 78 aa10.77□□□□□ -0.69
Cdkl3-208ENSMUST00000109081 1700074P13RikQ9D9G7 251 aa10.76□□□□□ -0.69
Cdkl3-208ENSMUST00000109081 Spint4Q9D263 159 aa10.75□□□□□ -0.69
Cdkl3-208ENSMUST00000109081 Pkhd1l1Q80ZA4 4249 aa10.75□□□□□ -0.69
Cdkl3-208ENSMUST00000109081 SacsQ9JLC8 4582 aa10.74□□□□□ -0.69
Cdkl3-208ENSMUST00000109081 Cypt15B1AXS0 87 aa10.74□□□□□ -0.69
Cdkl3-208ENSMUST00000109081 Atox1O08997 68 aaKnown RBP10.7□□□□□ -0.7
Cdkl3-208ENSMUST00000109081 Vps13bQ80TY5 3993 aa10.68□□□□□ -0.7
Cdkl3-208ENSMUST00000109081 H2al1aQ5M8Q2 105 aa10.68□□□□□ -0.7
Cdkl3-208ENSMUST00000109081 Gm10267M0QWD8 85 aa10.63□□□□□ -0.71
Cdkl3-208ENSMUST00000109081 Rps29P62274 56 aa10.61□□□□□ -0.71
Cdkl3-208ENSMUST00000109081 Defb13Q8R2I4 64 aa10.61□□□□□ -0.71
Cdkl3-208ENSMUST00000109081 Coa5Q99M07 74 aa10.59□□□□□ -0.71
Cdkl3-208ENSMUST00000109081 Kmt2cQ8BRH4 4903 aa10.58□□□□□ -0.72
Cdkl3-208ENSMUST00000109081 A530084C06RikQ3UTW2 186 aa10.58□□□□□ -0.72
Cdkl3-208ENSMUST00000109081 Cdc42se1Q8BHL7 80 aa10.57□□□□□ -0.72
Cdkl3-208ENSMUST00000109081 Ryr1E9PZQ0 5035 aa10.57□□□□□ -0.72
Cdkl3-208ENSMUST00000109081 Krtap19-5O08632 62 aa10.56□□□□□ -0.72
Cdkl3-208ENSMUST00000109081 Chtf8P0CG14 533 aa10.51□□□□□ -0.73
Cdkl3-208ENSMUST00000109081 Dnah8Q91XQ0 4731 aa10.48□□□□□ -0.73
Cdkl3-208ENSMUST00000109081 Lrp1Q91ZX7 4545 aaKnown RBP10.48□□□□□ -0.73
Cdkl3-208ENSMUST00000109081 Gm10197F6QEY5 67 aa10.46□□□□□ -0.74
Cdkl3-208ENSMUST00000109081 Gm10160F6Y577 67 aa10.42□□□□□ -0.74
Cdkl3-208ENSMUST00000109081 Gm26620Q9CY65 116 aa10.42□□□□□ -0.74
Cdkl3-208ENSMUST00000109081 Fat3Q8BNA6 4555 aa10.4□□□□□ -0.74
Cdkl3-208ENSMUST00000109081 Gm10337F7DEP7 55 aa10.36□□□□□ -0.75
Cdkl3-208ENSMUST00000109081 Defb38Q7TNV7 63 aa10.36□□□□□ -0.75
Cdkl3-208ENSMUST00000109081 Gm11939A2A592 99 aa10.35□□□□□ -0.75
Cdkl3-208ENSMUST00000109081 D6Ertd527eA0A0N4SWI3 464 aa10.32□□□□□ -0.76
Cdkl3-208ENSMUST00000109081 H2al1bA0A087WP11 105 aa10.27□□□□□ -0.76
Cdkl3-208ENSMUST00000109081 H2al1kJ3QP08 105 aa10.27□□□□□ -0.76
Cdkl3-208ENSMUST00000109081 Phxr4P15974 95 aa10.27□□□□□ -0.76
Cdkl3-208ENSMUST00000109081 H2al1eQ810S6 105 aa10.27□□□□□ -0.76
Cdkl3-208ENSMUST00000109081 H2al1mQ9DAD9 105 aa10.27□□□□□ -0.76
Cdkl3-208ENSMUST00000109081 Krtap3-2Q9D638 99 aa10.27□□□□□ -0.77
Cdkl3-208ENSMUST00000109081 Krtap3-3Q9D7P0 99 aa10.27□□□□□ -0.77
Cdkl3-208ENSMUST00000109081 Abca13Q5SSE9 5034 aa10.26□□□□□ -0.77
Cdkl3-208ENSMUST00000109081 Gm10643Q3URG9 111 aa10.25□□□□□ -0.77
Cdkl3-208ENSMUST00000109081 Gm21798J3QNU5 87 aa10.24□□□□□ -0.77
Cdkl3-208ENSMUST00000109081 Gm9736A0A1W2P7N1 277 aa10.21□□□□□ -0.78
Cdkl3-208ENSMUST00000109081 Gm10999F6Q4M4 69 aa10.19□□□□□ -0.78
Cdkl3-208ENSMUST00000109081 Gm5767A0A0J9YTU8 78 aa10.18□□□□□ -0.78
Cdkl3-208ENSMUST00000109081 Q8BGJ3 129 aa10.16□□□□□ -0.78
Cdkl3-208ENSMUST00000109081 A930033H14RikG5E8X6 103 aa10.12□□□□□ -0.79
Cdkl3-208ENSMUST00000109081 Dnhd1D3Z2X2 4750 aa10.11□□□□□ -0.79
Cdkl3-208ENSMUST00000109081 Gm20661K7N787 53 aa10.1□□□□□ -0.79
Cdkl3-208ENSMUST00000109081 2310034C09RikQ9D746 214 aa10.1□□□□□ -0.79
Cdkl3-208ENSMUST00000109081 Gm4491E0CX42 125 aa10.08□□□□□ -0.8
Cdkl3-208ENSMUST00000109081 Herc2Q4U2R1 4836 aa10.08□□□□□ -0.8
Cdkl3-208ENSMUST00000109081 Mycbp2Q7TPH6 4711 aa10.07□□□□□ -0.8
Cdkl3-208ENSMUST00000109081 Sox16Q62247 57 aa10.06□□□□□ -0.8
Cdkl3-208ENSMUST00000109081 Gm5965D3Z724 196 aa10.05□□□□□ -0.8
Cdkl3-208ENSMUST00000109081 2310079G19RikQ9D6L6 185 aa10.05□□□□□ -0.8
Cdkl3-208ENSMUST00000109081 Birc6O88738 4882 aa10.04□□□□□ -0.8
Cdkl3-208ENSMUST00000109081 Kiaa1109A2AAE1 5005 aa10.03□□□□□ -0.8
Cdkl3-208ENSMUST00000109081 4933415A04RikQ9D443 101 aa10.03□□□□□ -0.8
Cdkl3-208ENSMUST00000109081 4930507D05RikQ8C9C9 103 aa10□□□□□ -0.81
Cdkl3-208ENSMUST00000109081 Ndufb1P0DN34 57 aa9.93□□□□□ -0.82
Cdkl3-208ENSMUST00000109081 Krtap15-1Q9QZU5 150 aa9.91□□□□□ -0.82
Cdkl3-208ENSMUST00000109081 Rpl37Q9D823 97 aa9.9□□□□□ -0.82
Cdkl3-208ENSMUST00000109081 Limd2Q8BGB5 128 aa9.86□□□□□ -0.83
Cdkl3-208ENSMUST00000109081 SptssbQ925E8 76 aa9.86□□□□□ -0.83
Cdkl3-208ENSMUST00000109081 Uqcr11Q9CPX8 56 aa9.86□□□□□ -0.83
Cdkl3-208ENSMUST00000109081 9230102O04RikA2ASX7 82 aa9.82□□□□□ -0.84
Cdkl3-208ENSMUST00000109081 Defb1P56386 69 aa9.82□□□□□ -0.84
Cdkl3-208ENSMUST00000109081 Rnase13Q5GAM7 153 aa9.82□□□□□ -0.84
Cdkl3-208ENSMUST00000109081 Gm9821Q8K076 103 aa9.81□□□□□ -0.84
Cdkl3-208ENSMUST00000109081 HydinQ80W93 5154 aa9.81□□□□□ -0.84
Cdkl3-208ENSMUST00000109081 Lrp2A2ARV4 4660 aa9.67□□□□□ -0.86
Cdkl3-208ENSMUST00000109081 Gm17416Q30KP4 66 aa9.63□□□□□ -0.87
Cdkl3-208ENSMUST00000109081 Gm3646F6S692 53 aa9.61□□□□□ -0.87
Cdkl3-208ENSMUST00000109081 Cox6b2Q80ZN9 88 aa9.59□□□□□ -0.87
Cdkl3-208ENSMUST00000109081 PcloQ9QYX7 5068 aa9.55□□□□□ -0.88
Cdkl3-208ENSMUST00000109081 Sec61bQ9CQS8 96 aaKnown RBP9.46□□□□□ -0.9
Cdkl3-208ENSMUST00000109081 Lce1mQ9CR91 182 aa9.41□□□□□ -0.9
Cdkl3-208ENSMUST00000109081 Sec61gP60060 68 aa9.38□□□□□ -0.91
Cdkl3-208ENSMUST00000109081 Ndufs5Q99LY9 106 aa9.37□□□□□ -0.91
Cdkl3-208ENSMUST00000109081 2310057N15RikQ9D6T8 200 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms