RNA–Protein interactions for RNA: ENSMUST00000106791.7

Trim3-203, Transcript of Tripartite motif-containing protein 3, mousemouse

TSL 1 (best) BASIC

Gene Trim3, Length 2,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-203ENSMUST00000106791 Tmem254aP0DN89 123 aa11.44□□□□□ -0.58
Trim3-203ENSMUST00000106791 Tmem254bP0DN90 123 aa11.44□□□□□ -0.58
Trim3-203ENSMUST00000106791 Tmem254cP0DN91 123 aa11.44□□□□□ -0.58
Trim3-203ENSMUST00000106791 Reg3aO09037 175 aa11.41□□□□□ -0.58
Trim3-203ENSMUST00000106791 Gm9736A0A1W2P7N1 277 aa11.4□□□□□ -0.58
Trim3-203ENSMUST00000106791 BatfO35284 125 aa11.4□□□□□ -0.59
Trim3-203ENSMUST00000106791 Mycbp2Q7TPH6 4711 aa11.39□□□□□ -0.59
Trim3-203ENSMUST00000106791 Pcp4P63054 62 aa11.38□□□□□ -0.59
Trim3-203ENSMUST00000106791 Igkv8-19A0A0G2JFN8 121 aa11.34□□□□□ -0.59
Trim3-203ENSMUST00000106791 Defa21Q8C1P2 93 aa11.32□□□□□ -0.6
Trim3-203ENSMUST00000106791 PcloQ9QYX7 5068 aa11.3□□□□□ -0.6
Trim3-203ENSMUST00000106791 Cypt15B1AXS0 87 aa11.3□□□□□ -0.6
Trim3-203ENSMUST00000106791 Hist1h4aP62806 103 aaKnown RBP11.28□□□□□ -0.6
Trim3-203ENSMUST00000106791 Lce1mQ9CR91 182 aa11.25□□□□□ -0.61
Trim3-203ENSMUST00000106791 Prr15lQ8JZM2 100 aa11.23□□□□□ -0.61
Trim3-203ENSMUST00000106791 Igkv3-3A0A140T8Q0 119 aa11.2□□□□□ -0.62
Trim3-203ENSMUST00000106791 Cystm1Q8K353 104 aa11.15□□□□□ -0.62
Trim3-203ENSMUST00000106791 Atp5eP56382 52 aa11.14□□□□□ -0.63
Trim3-203ENSMUST00000106791 Gm11939A2A592 99 aa11.13□□□□□ -0.63
Trim3-203ENSMUST00000106791 Lrp2A2ARV4 4660 aa11.12□□□□□ -0.63
Trim3-203ENSMUST00000106791 Gm5965D3Z724 196 aa11.1□□□□□ -0.63
Trim3-203ENSMUST00000106791 Fam229bQ8CF36 80 aa11.09□□□□□ -0.63
Trim3-203ENSMUST00000106791 Gm26620Q9CY65 116 aa11.08□□□□□ -0.64
Trim3-203ENSMUST00000106791 BikO70337 150 aa11.07□□□□□ -0.64
Trim3-203ENSMUST00000106791 A0A286YE49 62 aa11.05□□□□□ -0.64
Trim3-203ENSMUST00000106791 Samd13D3YUG0 102 aa11.04□□□□□ -0.64
Trim3-203ENSMUST00000106791 GhrhP16043 103 aa11.04□□□□□ -0.64
Trim3-203ENSMUST00000106791 Gm5767A0A0J9YTU8 78 aa11.03□□□□□ -0.64
Trim3-203ENSMUST00000106791 Spink8Q09TK9 105 aa11.03□□□□□ -0.64
Trim3-203ENSMUST00000106791 Defb13Q8R2I4 64 aa11.03□□□□□ -0.64
Trim3-203ENSMUST00000106791 Ndufc1Q9CQY9 76 aa11.02□□□□□ -0.65
Trim3-203ENSMUST00000106791 Gm10267M0QWD8 85 aa11.01□□□□□ -0.65
Trim3-203ENSMUST00000106791 Herc1E9PZP8 4859 aa10.97□□□□□ -0.65
Trim3-203ENSMUST00000106791 Anapc13Q8R034 74 aa10.96□□□□□ -0.65
Trim3-203ENSMUST00000106791 Naa38Q9D2U5 125 aa10.94□□□□□ -0.66
Trim3-203ENSMUST00000106791 Scgb1b2O35176 93 aa10.92□□□□□ -0.66
Trim3-203ENSMUST00000106791 A930033H14RikG5E8X6 103 aa10.87□□□□□ -0.67
Trim3-203ENSMUST00000106791 7530416G11RikJ3QJX6 159 aa10.87□□□□□ -0.67
Trim3-203ENSMUST00000106791 4930518I15RikQ3V2W7 57 aa10.86□□□□□ -0.67
Trim3-203ENSMUST00000106791 1700074P13RikQ9D9G7 251 aa10.85□□□□□ -0.67
Trim3-203ENSMUST00000106791 Gm18596A0A1W2P860 280 aa10.8□□□□□ -0.68
Trim3-203ENSMUST00000106791 Gm9821Q8K076 103 aa10.79□□□□□ -0.68
Trim3-203ENSMUST00000106791 Krtap15-1Q9QZU5 150 aa10.79□□□□□ -0.68
Trim3-203ENSMUST00000106791 Serp2Q6TAW2 65 aa10.79□□□□□ -0.68
Trim3-203ENSMUST00000106791 Krtap3-2Q9D638 99 aa10.77□□□□□ -0.69
Trim3-203ENSMUST00000106791 Krtap3-3Q9D7P0 99 aa10.77□□□□□ -0.69
Trim3-203ENSMUST00000106791 Rpl37Q9D823 97 aa10.72□□□□□ -0.69
Trim3-203ENSMUST00000106791 B230307C23RikQ8BLB2 64 aa10.66□□□□□ -0.7
Trim3-203ENSMUST00000106791 Atox1O08997 68 aaKnown RBP10.62□□□□□ -0.71
Trim3-203ENSMUST00000106791 Coa6Q8BGD8 79 aa10.57□□□□□ -0.72
Trim3-203ENSMUST00000106791 Gm4491E0CX42 125 aa10.56□□□□□ -0.72
Trim3-203ENSMUST00000106791 Spint4Q9D263 159 aa10.55□□□□□ -0.72
Trim3-203ENSMUST00000106791 Chtf8P0CG14 533 aa10.53□□□□□ -0.72
Trim3-203ENSMUST00000106791 Ush2AQ2QI47 5193 aa10.53□□□□□ -0.72
Trim3-203ENSMUST00000106791 Apoc4Q61268 124 aa10.53□□□□□ -0.72
Trim3-203ENSMUST00000106791 Defb38Q7TNV7 63 aa10.52□□□□□ -0.73
Trim3-203ENSMUST00000106791 Rnase13Q5GAM7 153 aa10.51□□□□□ -0.73
Trim3-203ENSMUST00000106791 Gm28539A0A087WSL9 92 aa10.51□□□□□ -0.73
Trim3-203ENSMUST00000106791 Sec61bQ9CQS8 96 aaKnown RBP10.49□□□□□ -0.73
Trim3-203ENSMUST00000106791 Prm1P02319 51 aa10.49□□□□□ -0.73
Trim3-203ENSMUST00000106791 Gm10999F6Q4M4 69 aa10.48□□□□□ -0.73
Trim3-203ENSMUST00000106791 Q8BGJ3 129 aa10.47□□□□□ -0.73
Trim3-203ENSMUST00000106791 Gm9789Q8BIG3 52 aa10.45□□□□□ -0.74
Trim3-203ENSMUST00000106791 2310034C09RikQ9D746 214 aa10.45□□□□□ -0.74
Trim3-203ENSMUST00000106791 2310057N15RikQ9D6T8 200 aa10.44□□□□□ -0.74
Trim3-203ENSMUST00000106791 Gm10160F6Y577 67 aa10.43□□□□□ -0.74
Trim3-203ENSMUST00000106791 Hmcn2A2AJ76 5100 aa10.42□□□□□ -0.74
Trim3-203ENSMUST00000106791 Gm7735D3YX18 52 aa10.41□□□□□ -0.74
Trim3-203ENSMUST00000106791 Prr13Q9CQJ5 137 aa10.4□□□□□ -0.74
Trim3-203ENSMUST00000106791 Gm21798J3QNU5 87 aa10.4□□□□□ -0.75
Trim3-203ENSMUST00000106791 Gm17416Q30KP4 66 aa10.3□□□□□ -0.76
Trim3-203ENSMUST00000106791 2310079G19RikQ9D6L6 185 aa10.3□□□□□ -0.76
Trim3-203ENSMUST00000106791 Ubr4A2AN08 5180 aa10.29□□□□□ -0.76
Trim3-203ENSMUST00000106791 Coa5Q99M07 74 aa10.29□□□□□ -0.76
Trim3-203ENSMUST00000106791 4930507D05RikQ8C9C9 103 aa10.28□□□□□ -0.76
Trim3-203ENSMUST00000106791 9230102O04RikA2ASX7 82 aa10.27□□□□□ -0.77
Trim3-203ENSMUST00000106791 Gm10643Q3URG9 111 aa10.26□□□□□ -0.77
Trim3-203ENSMUST00000106791 Smlr1J3QMJ4 66 aa10.24□□□□□ -0.77
Trim3-203ENSMUST00000106791 Tmem258P61166 79 aa10.18□□□□□ -0.78
Trim3-203ENSMUST00000106791 4932415D10RikA0A1W2P6U8 4986 aa10.14□□□□□ -0.79
Trim3-203ENSMUST00000106791 SnurfQ9WU12 71 aa10.14□□□□□ -0.79
Trim3-203ENSMUST00000106791 Crct1Q6PAI5 102 aa10.12□□□□□ -0.79
Trim3-203ENSMUST00000106791 Krtap1-3A2A588 173 aa10.11□□□□□ -0.79
Trim3-203ENSMUST00000106791 Pet100P0DJE0 76 aa10.11□□□□□ -0.79
Trim3-203ENSMUST00000106791 Gm19935A0A1B0GSF9 52 aa10.1□□□□□ -0.79
Trim3-203ENSMUST00000106791 Krtap16-3Q8C1I6 86 aa10.09□□□□□ -0.79
Trim3-203ENSMUST00000106791 Smim20D3Z7Q2 69 aa10.02□□□□□ -0.8
Trim3-203ENSMUST00000106791 Krtap19-1Q925H2 87 aa10.02□□□□□ -0.8
Trim3-203ENSMUST00000106791 Defb1P56386 69 aa10.01□□□□□ -0.81
Trim3-203ENSMUST00000106791 Fam229aB2KGE5 128 aa9.99□□□□□ -0.81
Trim3-203ENSMUST00000106791 SmcpP15265 143 aa9.99□□□□□ -0.81
Trim3-203ENSMUST00000106791 Krtap19-3Q925H6 87 aa9.99□□□□□ -0.81
Trim3-203ENSMUST00000106791 Cdc42se1Q8BHL7 80 aa9.97□□□□□ -0.81
Trim3-203ENSMUST00000106791 2210017I01RikA0A0A6YVV1 95 aa9.97□□□□□ -0.81
Trim3-203ENSMUST00000106791 ZanO88799 5376 aa9.93□□□□□ -0.82
Trim3-203ENSMUST00000106791 Krtap13-1Q8K198 168 aa9.92□□□□□ -0.82
Trim3-203ENSMUST00000106791 SptssbQ925E8 76 aa9.91□□□□□ -0.82
Trim3-203ENSMUST00000106791 Gm10318A0A1W2P728 225 aa9.9□□□□□ -0.82
Trim3-203ENSMUST00000106791 Gm20661K7N787 53 aa9.87□□□□□ -0.83
Trim3-203ENSMUST00000106791 Serp1Q9Z1W5 66 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms