RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 Cypt14J3QPF7 87 aa13,06□□□□□ -0,32
Trim3-202ENSMUST00000106789 Znf706Q9D115 76 aaKnown RBP13,03□□□□□ -0,32
Trim3-202ENSMUST00000106789 Gm16253D3Z167 63 aa13,03□□□□□ -0,32
Trim3-202ENSMUST00000106789 9230102O04RikA2ASX7 82 aa13,02□□□□□ -0,33
Trim3-202ENSMUST00000106789 Gm9507D3Z5T3 223 aa13,02□□□□□ -0,33
Trim3-202ENSMUST00000106789 1600014C23RikQ9DAX4 101 aa13□□□□□ -0,33
Trim3-202ENSMUST00000106789 Sec61gP60060 68 aa12,99□□□□□ -0,33
Trim3-202ENSMUST00000106789 NbdyA0A0N4SUI7 68 aa12,99□□□□□ -0,33
Trim3-202ENSMUST00000106789 Gm21798J3QNU5 87 aa12,98□□□□□ -0,33
Trim3-202ENSMUST00000106789 Ndufb1P0DN34 57 aa12,98□□□□□ -0,33
Trim3-202ENSMUST00000106789 PrkdcP97313 4128 aa12,96□□□□□ -0,34
Trim3-202ENSMUST00000106789 Fras1Q80T14 4010 aa12,95□□□□□ -0,34
Trim3-202ENSMUST00000106789 Defb13Q8R2I4 64 aa12,94□□□□□ -0,34
Trim3-202ENSMUST00000106789 Gm4707V9GXN5 68 aa12,94□□□□□ -0,34
Trim3-202ENSMUST00000106789 Defb39Q70KL3 74 aa12,92□□□□□ -0,34
Trim3-202ENSMUST00000106789 Gm3646F6S692 53 aa12,91□□□□□ -0,34
Trim3-202ENSMUST00000106789 TnxbO35452 4006 aa12,89□□□□□ -0,35
Trim3-202ENSMUST00000106789 PlecQ9QXS1 4691 aaKnown RBP12,87□□□□□ -0,35
Trim3-202ENSMUST00000106789 Dnah7cA0A087WR13 4024 aa12,87□□□□□ -0,35
Trim3-202ENSMUST00000106789 Dnah5Q8VHE6 4621 aa12,86□□□□□ -0,35
Trim3-202ENSMUST00000106789 Gm10643Q3URG9 111 aa12,84□□□□□ -0,35
Trim3-202ENSMUST00000106789 Ccdc179J3QM76 67 aa12,84□□□□□ -0,35
Trim3-202ENSMUST00000106789 Krtap14O08640 167 aa12,83□□□□□ -0,36
Trim3-202ENSMUST00000106789 Cypt15B1AXS0 87 aa12,8□□□□□ -0,36
Trim3-202ENSMUST00000106789 Tnp2P11378 117 aa12,8□□□□□ -0,36
Trim3-202ENSMUST00000106789 Gm26620Q9CY65 116 aa12,8□□□□□ -0,36
Trim3-202ENSMUST00000106789 1700042G07RikB1AUF7 90 aa12,79□□□□□ -0,36
Trim3-202ENSMUST00000106789 Gm9918Q8BUR5 174 aa12,79□□□□□ -0,36
Trim3-202ENSMUST00000106789 Wfdc3Q14AE4 130 aa12,77□□□□□ -0,36
Trim3-202ENSMUST00000106789 Spaca4Q80ZQ0 127 aa12,77□□□□□ -0,36
Trim3-202ENSMUST00000106789 Gpr15lA0A0B4J1N3 78 aa12,76□□□□□ -0,37
Trim3-202ENSMUST00000106789 Limd2Q8BGB5 128 aa12,76□□□□□ -0,37
Trim3-202ENSMUST00000106789 Uqcr11Q9CPX8 56 aa12,75□□□□□ -0,37
Trim3-202ENSMUST00000106789 Gm10999F6Q4M4 69 aa12,7□□□□□ -0,38
Trim3-202ENSMUST00000106789 2310050C09RikG5E8Z3 280 aa12,69□□□□□ -0,38
Trim3-202ENSMUST00000106789 Krtap13O88375 197 aa12,68□□□□□ -0,38
Trim3-202ENSMUST00000106789 Krtap10-4Q08EG8 221 aa12,68□□□□□ -0,38
Trim3-202ENSMUST00000106789 Hectd4E9Q2E4 4418 aa12,65□□□□□ -0,38
Trim3-202ENSMUST00000106789 Ndufs5Q99LY9 106 aa12,65□□□□□ -0,38
Trim3-202ENSMUST00000106789 Ly6g6cQ9Z1Q4 126 aa12,62□□□□□ -0,39
Trim3-202ENSMUST00000106789 Dnah7aE9Q0T8 4024 aa12,62□□□□□ -0,39
Trim3-202ENSMUST00000106789 Q8BGJ3 129 aa12,57□□□□□ -0,4
Trim3-202ENSMUST00000106789 Defb1P56386 69 aa12,55□□□□□ -0,4
Trim3-202ENSMUST00000106789 Stard9Q80TF6 4561 aa12,54□□□□□ -0,4
Trim3-202ENSMUST00000106789 2310034C09RikQ9D746 214 aa12,54□□□□□ -0,4
Trim3-202ENSMUST00000106789 FcgbpE9Q0B5 2583 aa12,5□□□□□ -0,41
Trim3-202ENSMUST00000106789 Vps13dB1ART2 4390 aa12,49□□□□□ -0,41
Trim3-202ENSMUST00000106789 Dnah2P0C6F1 4456 aa12,48□□□□□ -0,41
Trim3-202ENSMUST00000106789 Pkd1O08852 4293 aa12,42□□□□□ -0,42
Trim3-202ENSMUST00000106789 Lrp1bQ9JI18 4599 aa12,39□□□□□ -0,43
Trim3-202ENSMUST00000106789 2310079G19RikQ9D6L6 185 aa12,39□□□□□ -0,43
Trim3-202ENSMUST00000106789 Krtap10-10A0A1W2P7T6 217 aa12,32□□□□□ -0,44
Trim3-202ENSMUST00000106789 Gm9821Q8K076 103 aa12,29□□□□□ -0,44
Trim3-202ENSMUST00000106789 Defb11Q8R2I7 77 aa12,27□□□□□ -0,44
Trim3-202ENSMUST00000106789 Krtap3-2Q9D638 99 aa12,26□□□□□ -0,45
Trim3-202ENSMUST00000106789 Krtap3-3Q9D7P0 99 aa12,26□□□□□ -0,45
Trim3-202ENSMUST00000106789 ApobE9Q414 4505 aa12,25□□□□□ -0,45
Trim3-202ENSMUST00000106789 4930507D05RikQ8C9C9 103 aa12,22□□□□□ -0,45
Trim3-202ENSMUST00000106789 Gm2696A0A1W2P709 240 aa12,19□□□□□ -0,46
Trim3-202ENSMUST00000106789 Pkhd1E9PZ36 4059 aa12,18□□□□□ -0,46
Trim3-202ENSMUST00000106789 A930033H14RikG5E8X6 103 aa12,16□□□□□ -0,46
Trim3-202ENSMUST00000106789 OxtP35454 125 aa12,14□□□□□ -0,47
Trim3-202ENSMUST00000106789 D6Ertd527eA0A0N4SWI3 464 aa12,14□□□□□ -0,47
Trim3-202ENSMUST00000106789 Gm4491E0CX42 125 aa12,13□□□□□ -0,47
Trim3-202ENSMUST00000106789 RetnlbQ99P86 105 aa11,96□□□□□ -0,49
Trim3-202ENSMUST00000106789 Pla2g10Q9QXX3 151 aa11,95□□□□□ -0,5
Trim3-202ENSMUST00000106789 SacsQ9JLC8 4582 aa11,91□□□□□ -0,5
Trim3-202ENSMUST00000106789 Fat2Q5F226 4351 aa11,9□□□□□ -0,51
Trim3-202ENSMUST00000106789 Gm11939A2A592 99 aa11,89□□□□□ -0,51
Trim3-202ENSMUST00000106789 Gm20537G3UYK7 97 aa11,81□□□□□ -0,52
Trim3-202ENSMUST00000106789 Fat1A0A1L1SQU7 4645 aa11,81□□□□□ -0,52
Trim3-202ENSMUST00000106789 Rps29P62274 56 aa11,8□□□□□ -0,52
Trim3-202ENSMUST00000106789 Gm3880A0A1B0GSB3 72 aa11,79□□□□□ -0,52
Trim3-202ENSMUST00000106789 Cox6b2Q80ZN9 88 aa11,76□□□□□ -0,53
Trim3-202ENSMUST00000106789 Vps13bQ80TY5 3993 aa11,7□□□□□ -0,54
Trim3-202ENSMUST00000106789 Dync1h1Q9JHU4 4644 aaKnown RBP11,67□□□□□ -0,54
Trim3-202ENSMUST00000106789 Gm12216A0A1W2P827 62 aa11,65□□□□□ -0,54
Trim3-202ENSMUST00000106789 Pkhd1l1Q80ZA4 4249 aa11,55□□□□□ -0,56
Trim3-202ENSMUST00000106789 Lrp1Q91ZX7 4545 aaKnown RBP11,53□□□□□ -0,56
Trim3-202ENSMUST00000106789 Gm5767A0A0J9YTU8 78 aa11,51□□□□□ -0,57
Trim3-202ENSMUST00000106789 Ryr3A2AGL3 4863 aa11,49□□□□□ -0,57
Trim3-202ENSMUST00000106789 Gm10382Q3V0T5 144 aa11,45□□□□□ -0,58
Trim3-202ENSMUST00000106789 Gm9955Q8CEJ8 102 aa11,44□□□□□ -0,58
Trim3-202ENSMUST00000106789 CriptO70333 101 aa11,44□□□□□ -0,58
Trim3-202ENSMUST00000106789 Gm17606F6ZL36 78 aa11,38□□□□□ -0,59
Trim3-202ENSMUST00000106789 Rnase13Q5GAM7 153 aa11,32□□□□□ -0,6
Trim3-202ENSMUST00000106789 Gm9736A0A1W2P7N1 277 aa11,31□□□□□ -0,6
Trim3-202ENSMUST00000106789 Krtap15-1Q9QZU5 150 aa11,28□□□□□ -0,6
Trim3-202ENSMUST00000106789 Gm5965D3Z724 196 aa11,22□□□□□ -0,61
Trim3-202ENSMUST00000106789 Krtap19-5O08632 62 aa11,17□□□□□ -0,62
Trim3-202ENSMUST00000106789 Rpl37Q9D823 97 aa11,17□□□□□ -0,62
Trim3-202ENSMUST00000106789 Mycbp2Q7TPH6 4711 aa11,16□□□□□ -0,62
Trim3-202ENSMUST00000106789 Romo1P60603 79 aa11,16□□□□□ -0,62
Trim3-202ENSMUST00000106789 Fat3Q8BNA6 4555 aa11,14□□□□□ -0,63
Trim3-202ENSMUST00000106789 Kmt2cQ8BRH4 4903 aa11,13□□□□□ -0,63
Trim3-202ENSMUST00000106789 Krtap3-1A2A591 98 aa11,03□□□□□ -0,64
Trim3-202ENSMUST00000106789 Mp68P56379 58 aa11□□□□□ -0,65
Trim3-202ENSMUST00000106789 Gm17416Q30KP4 66 aa10,95□□□□□ -0,66
Trim3-202ENSMUST00000106789 Abca13Q5SSE9 5034 aa10,95□□□□□ -0,66
Trim3-202ENSMUST00000106789 Gm20538F6Z9R1 75 aa10,92□□□□□ -0,66
Retrieved 100 of 22,080 RNA–protein pairs in 31,2 ms