RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 Cypt14J3QPF7 87 aa13.06□□□□□ -0.32
Trim3-202ENSMUST00000106789 Znf706Q9D115 76 aaKnown RBP13.03□□□□□ -0.32
Trim3-202ENSMUST00000106789 Gm16253D3Z167 63 aa13.03□□□□□ -0.32
Trim3-202ENSMUST00000106789 9230102O04RikA2ASX7 82 aa13.02□□□□□ -0.33
Trim3-202ENSMUST00000106789 Gm9507D3Z5T3 223 aa13.02□□□□□ -0.33
Trim3-202ENSMUST00000106789 1600014C23RikQ9DAX4 101 aa13□□□□□ -0.33
Trim3-202ENSMUST00000106789 Sec61gP60060 68 aa12.99□□□□□ -0.33
Trim3-202ENSMUST00000106789 NbdyA0A0N4SUI7 68 aa12.99□□□□□ -0.33
Trim3-202ENSMUST00000106789 Gm21798J3QNU5 87 aa12.98□□□□□ -0.33
Trim3-202ENSMUST00000106789 Ndufb1P0DN34 57 aa12.98□□□□□ -0.33
Trim3-202ENSMUST00000106789 PrkdcP97313 4128 aa12.96□□□□□ -0.34
Trim3-202ENSMUST00000106789 Fras1Q80T14 4010 aa12.95□□□□□ -0.34
Trim3-202ENSMUST00000106789 Defb13Q8R2I4 64 aa12.94□□□□□ -0.34
Trim3-202ENSMUST00000106789 Gm4707V9GXN5 68 aa12.94□□□□□ -0.34
Trim3-202ENSMUST00000106789 Defb39Q70KL3 74 aa12.92□□□□□ -0.34
Trim3-202ENSMUST00000106789 Gm3646F6S692 53 aa12.91□□□□□ -0.34
Trim3-202ENSMUST00000106789 TnxbO35452 4006 aa12.89□□□□□ -0.35
Trim3-202ENSMUST00000106789 PlecQ9QXS1 4691 aaKnown RBP12.87□□□□□ -0.35
Trim3-202ENSMUST00000106789 Dnah7cA0A087WR13 4024 aa12.87□□□□□ -0.35
Trim3-202ENSMUST00000106789 Dnah5Q8VHE6 4621 aa12.86□□□□□ -0.35
Trim3-202ENSMUST00000106789 Gm10643Q3URG9 111 aa12.84□□□□□ -0.35
Trim3-202ENSMUST00000106789 Ccdc179J3QM76 67 aa12.84□□□□□ -0.35
Trim3-202ENSMUST00000106789 Krtap14O08640 167 aa12.83□□□□□ -0.36
Trim3-202ENSMUST00000106789 Cypt15B1AXS0 87 aa12.8□□□□□ -0.36
Trim3-202ENSMUST00000106789 Tnp2P11378 117 aa12.8□□□□□ -0.36
Trim3-202ENSMUST00000106789 Gm26620Q9CY65 116 aa12.8□□□□□ -0.36
Trim3-202ENSMUST00000106789 1700042G07RikB1AUF7 90 aa12.79□□□□□ -0.36
Trim3-202ENSMUST00000106789 Gm9918Q8BUR5 174 aa12.79□□□□□ -0.36
Trim3-202ENSMUST00000106789 Wfdc3Q14AE4 130 aa12.77□□□□□ -0.36
Trim3-202ENSMUST00000106789 Spaca4Q80ZQ0 127 aa12.77□□□□□ -0.36
Trim3-202ENSMUST00000106789 Gpr15lA0A0B4J1N3 78 aa12.76□□□□□ -0.37
Trim3-202ENSMUST00000106789 Limd2Q8BGB5 128 aa12.76□□□□□ -0.37
Trim3-202ENSMUST00000106789 Uqcr11Q9CPX8 56 aa12.75□□□□□ -0.37
Trim3-202ENSMUST00000106789 Gm10999F6Q4M4 69 aa12.7□□□□□ -0.38
Trim3-202ENSMUST00000106789 2310050C09RikG5E8Z3 280 aa12.69□□□□□ -0.38
Trim3-202ENSMUST00000106789 Krtap13O88375 197 aa12.68□□□□□ -0.38
Trim3-202ENSMUST00000106789 Krtap10-4Q08EG8 221 aa12.68□□□□□ -0.38
Trim3-202ENSMUST00000106789 Hectd4E9Q2E4 4418 aa12.65□□□□□ -0.38
Trim3-202ENSMUST00000106789 Ndufs5Q99LY9 106 aa12.65□□□□□ -0.38
Trim3-202ENSMUST00000106789 Ly6g6cQ9Z1Q4 126 aa12.62□□□□□ -0.39
Trim3-202ENSMUST00000106789 Dnah7aE9Q0T8 4024 aa12.62□□□□□ -0.39
Trim3-202ENSMUST00000106789 Q8BGJ3 129 aa12.57□□□□□ -0.4
Trim3-202ENSMUST00000106789 Defb1P56386 69 aa12.55□□□□□ -0.4
Trim3-202ENSMUST00000106789 Stard9Q80TF6 4561 aa12.54□□□□□ -0.4
Trim3-202ENSMUST00000106789 2310034C09RikQ9D746 214 aa12.54□□□□□ -0.4
Trim3-202ENSMUST00000106789 FcgbpE9Q0B5 2583 aa12.5□□□□□ -0.41
Trim3-202ENSMUST00000106789 Vps13dB1ART2 4390 aa12.49□□□□□ -0.41
Trim3-202ENSMUST00000106789 Dnah2P0C6F1 4456 aa12.48□□□□□ -0.41
Trim3-202ENSMUST00000106789 Pkd1O08852 4293 aa12.42□□□□□ -0.42
Trim3-202ENSMUST00000106789 Lrp1bQ9JI18 4599 aa12.39□□□□□ -0.43
Trim3-202ENSMUST00000106789 2310079G19RikQ9D6L6 185 aa12.39□□□□□ -0.43
Trim3-202ENSMUST00000106789 Krtap10-10A0A1W2P7T6 217 aa12.32□□□□□ -0.44
Trim3-202ENSMUST00000106789 Gm9821Q8K076 103 aa12.29□□□□□ -0.44
Trim3-202ENSMUST00000106789 Defb11Q8R2I7 77 aa12.27□□□□□ -0.44
Trim3-202ENSMUST00000106789 Krtap3-2Q9D638 99 aa12.26□□□□□ -0.45
Trim3-202ENSMUST00000106789 Krtap3-3Q9D7P0 99 aa12.26□□□□□ -0.45
Trim3-202ENSMUST00000106789 ApobE9Q414 4505 aa12.25□□□□□ -0.45
Trim3-202ENSMUST00000106789 4930507D05RikQ8C9C9 103 aa12.22□□□□□ -0.45
Trim3-202ENSMUST00000106789 Gm2696A0A1W2P709 240 aa12.19□□□□□ -0.46
Trim3-202ENSMUST00000106789 Pkhd1E9PZ36 4059 aa12.18□□□□□ -0.46
Trim3-202ENSMUST00000106789 A930033H14RikG5E8X6 103 aa12.16□□□□□ -0.46
Trim3-202ENSMUST00000106789 OxtP35454 125 aa12.14□□□□□ -0.47
Trim3-202ENSMUST00000106789 D6Ertd527eA0A0N4SWI3 464 aa12.14□□□□□ -0.47
Trim3-202ENSMUST00000106789 Gm4491E0CX42 125 aa12.13□□□□□ -0.47
Trim3-202ENSMUST00000106789 RetnlbQ99P86 105 aa11.96□□□□□ -0.49
Trim3-202ENSMUST00000106789 Pla2g10Q9QXX3 151 aa11.95□□□□□ -0.5
Trim3-202ENSMUST00000106789 SacsQ9JLC8 4582 aa11.91□□□□□ -0.5
Trim3-202ENSMUST00000106789 Fat2Q5F226 4351 aa11.9□□□□□ -0.51
Trim3-202ENSMUST00000106789 Gm11939A2A592 99 aa11.89□□□□□ -0.51
Trim3-202ENSMUST00000106789 Gm20537G3UYK7 97 aa11.81□□□□□ -0.52
Trim3-202ENSMUST00000106789 Fat1A0A1L1SQU7 4645 aa11.81□□□□□ -0.52
Trim3-202ENSMUST00000106789 Rps29P62274 56 aa11.8□□□□□ -0.52
Trim3-202ENSMUST00000106789 Gm3880A0A1B0GSB3 72 aa11.79□□□□□ -0.52
Trim3-202ENSMUST00000106789 Cox6b2Q80ZN9 88 aa11.76□□□□□ -0.53
Trim3-202ENSMUST00000106789 Vps13bQ80TY5 3993 aa11.7□□□□□ -0.54
Trim3-202ENSMUST00000106789 Dync1h1Q9JHU4 4644 aaKnown RBP11.67□□□□□ -0.54
Trim3-202ENSMUST00000106789 Gm12216A0A1W2P827 62 aa11.65□□□□□ -0.54
Trim3-202ENSMUST00000106789 Pkhd1l1Q80ZA4 4249 aa11.55□□□□□ -0.56
Trim3-202ENSMUST00000106789 Lrp1Q91ZX7 4545 aaKnown RBP11.53□□□□□ -0.56
Trim3-202ENSMUST00000106789 Gm5767A0A0J9YTU8 78 aa11.51□□□□□ -0.57
Trim3-202ENSMUST00000106789 Ryr3A2AGL3 4863 aa11.49□□□□□ -0.57
Trim3-202ENSMUST00000106789 Gm10382Q3V0T5 144 aa11.45□□□□□ -0.58
Trim3-202ENSMUST00000106789 Gm9955Q8CEJ8 102 aa11.44□□□□□ -0.58
Trim3-202ENSMUST00000106789 CriptO70333 101 aa11.44□□□□□ -0.58
Trim3-202ENSMUST00000106789 Gm17606F6ZL36 78 aa11.38□□□□□ -0.59
Trim3-202ENSMUST00000106789 Rnase13Q5GAM7 153 aa11.32□□□□□ -0.6
Trim3-202ENSMUST00000106789 Gm9736A0A1W2P7N1 277 aa11.31□□□□□ -0.6
Trim3-202ENSMUST00000106789 Krtap15-1Q9QZU5 150 aa11.28□□□□□ -0.6
Trim3-202ENSMUST00000106789 Gm5965D3Z724 196 aa11.22□□□□□ -0.61
Trim3-202ENSMUST00000106789 Krtap19-5O08632 62 aa11.17□□□□□ -0.62
Trim3-202ENSMUST00000106789 Rpl37Q9D823 97 aa11.17□□□□□ -0.62
Trim3-202ENSMUST00000106789 Mycbp2Q7TPH6 4711 aa11.16□□□□□ -0.62
Trim3-202ENSMUST00000106789 Romo1P60603 79 aa11.16□□□□□ -0.62
Trim3-202ENSMUST00000106789 Fat3Q8BNA6 4555 aa11.14□□□□□ -0.63
Trim3-202ENSMUST00000106789 Kmt2cQ8BRH4 4903 aa11.13□□□□□ -0.63
Trim3-202ENSMUST00000106789 Krtap3-1A2A591 98 aa11.03□□□□□ -0.64
Trim3-202ENSMUST00000106789 Mp68P56379 58 aa11□□□□□ -0.65
Trim3-202ENSMUST00000106789 Gm17416Q30KP4 66 aa10.95□□□□□ -0.66
Trim3-202ENSMUST00000106789 Abca13Q5SSE9 5034 aa10.95□□□□□ -0.66
Trim3-202ENSMUST00000106789 Gm20538F6Z9R1 75 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 7.2 ms