RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 NischQ80TM9 1593 aa40,61■■■■■ 4,09
Trim3-202ENSMUST00000106789 Abcc9P70170 1546 aa39,39■■■■□ 3,9
Trim3-202ENSMUST00000106789 Gm35339A0A140LHH9 1649 aa39,37■■■■□ 3,89
Trim3-202ENSMUST00000106789 Rhox8Q6VSS7 320 aa38,59■■■■□ 3,77
Trim3-202ENSMUST00000106789 Abcc8B2RUS7 1588 aa38,35■■■■□ 3,73
Trim3-202ENSMUST00000106789 Rtl1Q7M732 1744 aa38,01■■■■□ 3,68
Trim3-202ENSMUST00000106789 Ccdc180J3QNE4 1664 aa37,56■■■■□ 3,6
Trim3-202ENSMUST00000106789 Rpgrip1Q9EPQ2 1331 aa36,7■■■■□ 3,47
Trim3-202ENSMUST00000106789 Zcchc6Q5BLK4 1491 aaKnown RBP36,65■■■■□ 3,46
Trim3-202ENSMUST00000106789 Acin1Q9JIX8 1338 aaKnown RBP36,03■■■■□ 3,36
Trim3-202ENSMUST00000106789 Ehmt2Q9Z148 1263 aaKnown RBP35,9■■■■□ 3,34
Trim3-202ENSMUST00000106789 HrcG5E8J6 738 aa35,81■■■■□ 3,32
Trim3-202ENSMUST00000106789 Ccdc136Q3TVA9 1136 aa35,74■■■■□ 3,31
Trim3-202ENSMUST00000106789 Dcaf1Q80TR8 1506 aa35,72■■■■□ 3,31
Trim3-202ENSMUST00000106789 Rb1cc1Q9ESK9 1588 aa35,64■■■■□ 3,3
Trim3-202ENSMUST00000106789 ScribQ80U72 1612 aa35,47■■■■□ 3,27
Trim3-202ENSMUST00000106789 Baz1aO88379 1555 aa35,18■■■■□ 3,22
Trim3-202ENSMUST00000106789 Trim41Q5NCC3 630 aa35,13■■■■□ 3,21
Trim3-202ENSMUST00000106789 Kdm5dQ62240 1548 aa34,99■■■■□ 3,19
Trim3-202ENSMUST00000106789 Pcgf6Q99NA9 353 aa34,94■■■■□ 3,18
Trim3-202ENSMUST00000106789 Cep164Q5DU05 1446 aa34,58■■■■□ 3,13
Trim3-202ENSMUST00000106789 NacadQ5SWP3 1504 aa34,56■■■■□ 3,12
Trim3-202ENSMUST00000106789 Smarca2Q6DIC0 1577 aa34,43■■■■□ 3,1
Trim3-202ENSMUST00000106789 Supt5hO55201 1082 aaKnown RBP34,28■■■■□ 3,08
Trim3-202ENSMUST00000106789 Crybg2B7ZCC2 1516 aa34,25■■■■□ 3,07
Trim3-202ENSMUST00000106789 Cngb1E1AZ71 1325 aa34,12■■■■□ 3,05
Trim3-202ENSMUST00000106789 Gab3Q8BSM5 595 aa34,07■■■■□ 3,04
Trim3-202ENSMUST00000106789 Chic1Q8CBW7 227 aa34,07■■■■□ 3,04
Trim3-202ENSMUST00000106789 Rsf1E9PWW9 1441 aaKnown RBP34,02■■■■□ 3,04
Trim3-202ENSMUST00000106789 Sycp2Q9CUU3 1500 aa33,8■■■■□ 3
Trim3-202ENSMUST00000106789 Zeb1Q64318 1117 aa33,77■■■■□ 3
Trim3-202ENSMUST00000106789 Brd4Q9ESU6 1400 aaKnown RBP33,73■■■□□ 2,99
Trim3-202ENSMUST00000106789 Ccdc88bQ4QRL3 1481 aa33,71■■■□□ 2,99
Trim3-202ENSMUST00000106789 Mier1Q5UAK0 511 aa33,61■■■□□ 2,97
Trim3-202ENSMUST00000106789 NefmP08553 848 aa33,6■■■□□ 2,97
Trim3-202ENSMUST00000106789 Cecr2E9Q2Z1 1453 aa33,6■■■□□ 2,97
Trim3-202ENSMUST00000106789 Golga3P55937 1487 aa33,58■■■□□ 2,97
Trim3-202ENSMUST00000106789 Neurod1Q60867 357 aa33,58■■■□□ 2,97
Trim3-202ENSMUST00000106789 Synj1Q8CHC4 1574 aa33,4■■■□□ 2,94
Trim3-202ENSMUST00000106789 Esf1Q3V1V3 845 aaKnown RBP33,32■■■□□ 2,92
Trim3-202ENSMUST00000106789 Sall2Q9QX96 1004 aa33,26■■■□□ 2,92
Trim3-202ENSMUST00000106789 CftrP26361 1476 aa33,11■■■□□ 2,89
Trim3-202ENSMUST00000106789 UbtfP25976 765 aaKnown RBP33,02■■■□□ 2,88
Trim3-202ENSMUST00000106789 Top2bQ64511 1612 aa33■■■□□ 2,87
Trim3-202ENSMUST00000106789 BicraF8VPZ9 1578 aa33■■■□□ 2,87
Trim3-202ENSMUST00000106789 Las1lA2BE28 776 aaKnown RBP32,85■■■□□ 2,85
Trim3-202ENSMUST00000106789 Wdr66E9Q743 1299 aa32,82■■■□□ 2,84
Trim3-202ENSMUST00000106789 Cttnbp2B9EJA2 1648 aa32,8■■■□□ 2,84
Trim3-202ENSMUST00000106789 Cc2d2aQ8CFW7 1633 aa32,79■■■□□ 2,84
Trim3-202ENSMUST00000106789 Rapgef2Q8CHG7 1496 aa32,75■■■□□ 2,83
Trim3-202ENSMUST00000106789 Aebp2Q9Z248 504 aaKnown RBP32,74■■■□□ 2,83
Trim3-202ENSMUST00000106789 Myt1lP97500 1187 aa32,68■■■□□ 2,82
Trim3-202ENSMUST00000106789 Anks4bQ8K3X6 423 aa32,68■■■□□ 2,82
Trim3-202ENSMUST00000106789 Fmn1Q05860 1466 aa32,54■■■□□ 2,8
Trim3-202ENSMUST00000106789 Cep162Q6ZQ06 1403 aa32,53■■■□□ 2,8
Trim3-202ENSMUST00000106789 Top2aQ01320 1528 aaKnown RBP32,5■■■□□ 2,79
Trim3-202ENSMUST00000106789 Csrnp3P59055 597 aa32,49■■■□□ 2,79
Trim3-202ENSMUST00000106789 ClspnQ80YR7 1315 aa32,49■■■□□ 2,79
Trim3-202ENSMUST00000106789 Smarca4Q3TKT4 1613 aaKnown RBP32,48■■■□□ 2,79
Trim3-202ENSMUST00000106789 Ppargc1bQ8VHJ7 1014 aa32,48■■■□□ 2,79
Trim3-202ENSMUST00000106789 1700123L14RikQ3V2K7 440 aa32,43■■■□□ 2,78
Trim3-202ENSMUST00000106789 Npm2Q80W85 207 aa32,41■■■□□ 2,78
Trim3-202ENSMUST00000106789 Cdk11bP24788 784 aaKnown RBP32,41■■■□□ 2,78
Trim3-202ENSMUST00000106789 Nop58Q6DFW4 536 aaKnown RBP32,39■■■□□ 2,78
Trim3-202ENSMUST00000106789 TonslQ6NZL6 1363 aa32,33■■■□□ 2,77
Trim3-202ENSMUST00000106789 Plekhg3Q4VAC9 1341 aa32,29■■■□□ 2,76
Trim3-202ENSMUST00000106789 Clip1Q922J3 1391 aa32,25■■■□□ 2,75
Trim3-202ENSMUST00000106789 Ncapd3Q6ZQK0 1506 aa32,02■■■□□ 2,72
Trim3-202ENSMUST00000106789 Iqgap2Q3UQ44 1575 aa32,01■■■□□ 2,72
Trim3-202ENSMUST00000106789 Eif4g1Q6NZJ6 1600 aaKnown RBP32■■■□□ 2,71
Trim3-202ENSMUST00000106789 Aplp2Q06335 707 aa31,92■■■□□ 2,7
Trim3-202ENSMUST00000106789 Ap3b1Q9Z1T1 1105 aa31,8■■■□□ 2,68
Trim3-202ENSMUST00000106789 Arhgap35Q91YM2 1499 aa31,8■■■□□ 2,68
Trim3-202ENSMUST00000106789 Eid3Q3V124 375 aa31,77■■■□□ 2,68
Trim3-202ENSMUST00000106789 Gm38655A0A286YDK6 273 aa31,75■■■□□ 2,67
Trim3-202ENSMUST00000106789 Eea1Q8BL66 1411 aa31,72■■■□□ 2,67
Trim3-202ENSMUST00000106789 Arap1Q4LDD4 1452 aa31,71■■■□□ 2,67
Trim3-202ENSMUST00000106789 CenpbP27790 599 aa31,71■■■□□ 2,67
Trim3-202ENSMUST00000106789 PtprkP35822 1457 aa31,7■■■□□ 2,67
Trim3-202ENSMUST00000106789 TnnQ80Z71 1560 aa31,7■■■□□ 2,66
Trim3-202ENSMUST00000106789 Atad2bE9Q166 1460 aaKnown RBP31,66■■■□□ 2,66
Trim3-202ENSMUST00000106789 Il27Q8K3I6 234 aa31,64■■■□□ 2,66
Trim3-202ENSMUST00000106789 Setd5Q5XJV7 1441 aa31,59■■■□□ 2,65
Trim3-202ENSMUST00000106789 NrkQ9R0G8 1455 aa31,58■■■□□ 2,65
Trim3-202ENSMUST00000106789 Arhgef5E9Q7D5 1581 aa31,54■■■□□ 2,64
Trim3-202ENSMUST00000106789 Kdm5bQ80Y84 1544 aa31,54■■■□□ 2,64
Trim3-202ENSMUST00000106789 Ccdc18Q640L5 1455 aa31,51■■■□□ 2,63
Trim3-202ENSMUST00000106789 Shroom4Q1W617 1475 aa31,39■■■□□ 2,62
Trim3-202ENSMUST00000106789 Pds5bQ4VA53 1446 aaKnown RBP31,38■■■□□ 2,61
Trim3-202ENSMUST00000106789 Kif15Q6P9L6 1387 aa31,36■■■□□ 2,61
Trim3-202ENSMUST00000106789 Baz1bQ9Z277 1479 aa31,35■■■□□ 2,61
Trim3-202ENSMUST00000106789 Hnrnpul2Q00PI9 745 aaKnown RBP31,34■■■□□ 2,61
Trim3-202ENSMUST00000106789 Mapk8ip2Q9ERE9 830 aa31,34■■■□□ 2,61
Trim3-202ENSMUST00000106789 Frmpd1A2AKB4 1549 aa31,33■■■□□ 2,61
Trim3-202ENSMUST00000106789 Tiam1Q60610 1591 aa31,33■■■□□ 2,61
Trim3-202ENSMUST00000106789 Map3k1P53349 1493 aa31,32■■■□□ 2,6
Trim3-202ENSMUST00000106789 BlmO88700 1416 aa31,32■■■□□ 2,6
Trim3-202ENSMUST00000106789 Lamc3Q9R0B6 1581 aa31,32■■■□□ 2,6
Trim3-202ENSMUST00000106789 Myt1Q8CFC2 1127 aa31,28■■■□□ 2,6
Trim3-202ENSMUST00000106789 Fam50aQ9WV03 339 aaKnown RBP31,26■■■□□ 2,6
Retrieved 100 of 22,080 RNA–protein pairs in 10,2 ms