RNA–Protein interactions for RNA: ENSMUST00000100497.10

Actb-201, Transcript of Actin, cytoplasmic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actb, Length 1,920 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-201ENSMUST00000100497 1700074P13RikQ9D9G7 251 aa7.35□□□□□ -1.23
Actb-201ENSMUST00000100497 SnurfQ9WU12 71 aa7.35□□□□□ -1.23
Actb-201ENSMUST00000100497 H2al1aQ5M8Q2 105 aa7.34□□□□□ -1.23
Actb-201ENSMUST00000100497 Brk1Q91VR8 75 aa7.34□□□□□ -1.23
Actb-201ENSMUST00000100497 Krtap14O08640 167 aa7.33□□□□□ -1.24
Actb-201ENSMUST00000100497 Dnah7aE9Q0T8 4024 aa7.31□□□□□ -1.24
Actb-201ENSMUST00000100497 Cdc42se1Q8BHL7 80 aa7.3□□□□□ -1.24
Actb-201ENSMUST00000100497 Krtap28-13A0A087WQP5 138 aa7.29□□□□□ -1.24
Actb-201ENSMUST00000100497 HrnrQ8VHD8 2496 aa7.27□□□□□ -1.25
Actb-201ENSMUST00000100497 Coa5Q99M07 74 aa7.27□□□□□ -1.25
Actb-201ENSMUST00000100497 Anapc11Q9CPX9 84 aa7.24□□□□□ -1.25
Actb-201ENSMUST00000100497 Dnah7cA0A087WR13 4024 aa7.23□□□□□ -1.25
Actb-201ENSMUST00000100497 Dph3Q8K0W9 82 aa7.22□□□□□ -1.25
Actb-201ENSMUST00000100497 Krtap10-4Q08EG8 221 aa7.21□□□□□ -1.25
Actb-201ENSMUST00000100497 Defb12Q8K4N3 78 aa7.21□□□□□ -1.25
Actb-201ENSMUST00000100497 Vps13dB1ART2 4390 aa7.21□□□□□ -1.26
Actb-201ENSMUST00000100497 Cypt15B1AXS0 87 aa7.2□□□□□ -1.26
Actb-201ENSMUST00000100497 Gm10160F6Y577 67 aa7.2□□□□□ -1.26
Actb-201ENSMUST00000100497 Gm10643Q3URG9 111 aa7.2□□□□□ -1.26
Actb-201ENSMUST00000100497 Gm10267M0QWD8 85 aa7.19□□□□□ -1.26
Actb-201ENSMUST00000100497 Chtf8P0CG14 533 aa7.19□□□□□ -1.26
Actb-201ENSMUST00000100497 A530084C06RikQ3UTW2 186 aa7.19□□□□□ -1.26
Actb-201ENSMUST00000100497 Mrpl55Q9CZ83 127 aa7.17□□□□□ -1.26
Actb-201ENSMUST00000100497 Pkd1O08852 4293 aa7.17□□□□□ -1.26
Actb-201ENSMUST00000100497 Defb13Q8R2I4 64 aa7.17□□□□□ -1.26
Actb-201ENSMUST00000100497 Krtap13O88375 197 aa7.16□□□□□ -1.26
Actb-201ENSMUST00000100497 Dnah2P0C6F1 4456 aa7.16□□□□□ -1.26
Actb-201ENSMUST00000100497 Spaca4Q80ZQ0 127 aa7.14□□□□□ -1.27
Actb-201ENSMUST00000100497 Gm10197F6QEY5 67 aa7.13□□□□□ -1.27
Actb-201ENSMUST00000100497 Rps29P62274 56 aa7.13□□□□□ -1.27
Actb-201ENSMUST00000100497 Ryr2E9Q401 4966 aaKnown RBP7.12□□□□□ -1.27
Actb-201ENSMUST00000100497 Gm10337F7DEP7 55 aa7.12□□□□□ -1.27
Actb-201ENSMUST00000100497 Sox16Q62247 57 aa7.11□□□□□ -1.27
Actb-201ENSMUST00000100497 Ryr3A2AGL3 4863 aa7.1□□□□□ -1.27
Actb-201ENSMUST00000100497 A030005K14RikA0A1Y7VNY1 122 aa7.1□□□□□ -1.27
Actb-201ENSMUST00000100497 ApobE9Q414 4505 aa7.09□□□□□ -1.27
Actb-201ENSMUST00000100497 Phxr4P15974 95 aa7.09□□□□□ -1.27
Actb-201ENSMUST00000100497 Gm2696A0A1W2P709 240 aa7.09□□□□□ -1.27
Actb-201ENSMUST00000100497 Gm11555B1AQ89 175 aa7.07□□□□□ -1.28
Actb-201ENSMUST00000100497 Gm11563B1AQ90 168 aa7.07□□□□□ -1.28
Actb-201ENSMUST00000100497 Krtap4-7Q9D732 168 aa7.07□□□□□ -1.28
Actb-201ENSMUST00000100497 H2al1bA0A087WP11 105 aa7.06□□□□□ -1.28
Actb-201ENSMUST00000100497 H2al1kJ3QP08 105 aa7.06□□□□□ -1.28
Actb-201ENSMUST00000100497 H2al1eQ810S6 105 aa7.06□□□□□ -1.28
Actb-201ENSMUST00000100497 H2al1mQ9DAD9 105 aa7.06□□□□□ -1.28
Actb-201ENSMUST00000100497 Hectd4E9Q2E4 4418 aa7.05□□□□□ -1.28
Actb-201ENSMUST00000100497 Dnah5Q8VHE6 4621 aa7.03□□□□□ -1.28
Actb-201ENSMUST00000100497 Dync1h1Q9JHU4 4644 aaKnown RBP7.02□□□□□ -1.29
Actb-201ENSMUST00000100497 Sec61gP60060 68 aa7□□□□□ -1.29
Actb-201ENSMUST00000100497 Ndufb1P0DN34 57 aa6.99□□□□□ -1.29
Actb-201ENSMUST00000100497 Gm26620Q9CY65 116 aa6.99□□□□□ -1.29
Actb-201ENSMUST00000100497 A030005L19RikA0A1Y7VIU2 113 aa6.97□□□□□ -1.29
Actb-201ENSMUST00000100497 Gm20661K7N787 53 aa6.95□□□□□ -1.3
Actb-201ENSMUST00000100497 Fat1A0A1L1SQU7 4645 aa6.94□□□□□ -1.3
Actb-201ENSMUST00000100497 Defb38Q7TNV7 63 aa6.94□□□□□ -1.3
Actb-201ENSMUST00000100497 Limd2Q8BGB5 128 aa6.94□□□□□ -1.3
Actb-201ENSMUST00000100497 Gm21798J3QNU5 87 aa6.93□□□□□ -1.3
Actb-201ENSMUST00000100497 Ryr1E9PZQ0 5035 aa6.93□□□□□ -1.3
Actb-201ENSMUST00000100497 Uqcr11Q9CPX8 56 aa6.91□□□□□ -1.3
Actb-201ENSMUST00000100497 Stard9Q80TF6 4561 aa6.91□□□□□ -1.3
Actb-201ENSMUST00000100497 SacsQ9JLC8 4582 aa6.9□□□□□ -1.31
Actb-201ENSMUST00000100497 Pkhd1E9PZ36 4059 aa6.89□□□□□ -1.31
Actb-201ENSMUST00000100497 Lrp1bQ9JI18 4599 aa6.88□□□□□ -1.31
Actb-201ENSMUST00000100497 Gm10999F6Q4M4 69 aa6.88□□□□□ -1.31
Actb-201ENSMUST00000100497 RetnlbQ99P86 105 aa6.88□□□□□ -1.31
Actb-201ENSMUST00000100497 4930507D05RikQ8C9C9 103 aa6.88□□□□□ -1.31
Actb-201ENSMUST00000100497 Q8BGJ3 129 aa6.86□□□□□ -1.31
Actb-201ENSMUST00000100497 SptssbQ925E8 76 aa6.86□□□□□ -1.31
Actb-201ENSMUST00000100497 A930033H14RikG5E8X6 103 aa6.85□□□□□ -1.31
Actb-201ENSMUST00000100497 2310034C09RikQ9D746 214 aa6.85□□□□□ -1.31
Actb-201ENSMUST00000100497 4933415A04RikQ9D443 101 aa6.82□□□□□ -1.32
Actb-201ENSMUST00000100497 Krtap3-2Q9D638 99 aa6.82□□□□□ -1.32
Actb-201ENSMUST00000100497 Krtap3-3Q9D7P0 99 aa6.82□□□□□ -1.32
Actb-201ENSMUST00000100497 Fat2Q5F226 4351 aa6.8□□□□□ -1.32
Actb-201ENSMUST00000100497 9230102O04RikA2ASX7 82 aa6.78□□□□□ -1.32
Actb-201ENSMUST00000100497 2310079G19RikQ9D6L6 185 aa6.78□□□□□ -1.32
Actb-201ENSMUST00000100497 Gm11939A2A592 99 aa6.77□□□□□ -1.33
Actb-201ENSMUST00000100497 Dnah8Q91XQ0 4731 aa6.76□□□□□ -1.33
Actb-201ENSMUST00000100497 Pkhd1l1Q80ZA4 4249 aa6.75□□□□□ -1.33
Actb-201ENSMUST00000100497 Gm4491E0CX42 125 aa6.74□□□□□ -1.33
Actb-201ENSMUST00000100497 Gm5767A0A0J9YTU8 78 aa6.72□□□□□ -1.33
Actb-201ENSMUST00000100497 Kmt2cQ8BRH4 4903 aa6.71□□□□□ -1.34
Actb-201ENSMUST00000100497 Vps13bQ80TY5 3993 aa6.69□□□□□ -1.34
Actb-201ENSMUST00000100497 Krtap19-5O08632 62 aa6.69□□□□□ -1.34
Actb-201ENSMUST00000100497 D6Ertd527eA0A0N4SWI3 464 aa6.68□□□□□ -1.34
Actb-201ENSMUST00000100497 Gm7544A0A1Y7VJ58 118 aa6.66□□□□□ -1.34
Actb-201ENSMUST00000100497 Birc6O88738 4882 aa6.61□□□□□ -1.35
Actb-201ENSMUST00000100497 Herc2Q4U2R1 4836 aa6.59□□□□□ -1.35
Actb-201ENSMUST00000100497 Defb1P56386 69 aa6.57□□□□□ -1.36
Actb-201ENSMUST00000100497 Dnhd1D3Z2X2 4750 aa6.56□□□□□ -1.36
Actb-201ENSMUST00000100497 Fat3Q8BNA6 4555 aa6.55□□□□□ -1.36
Actb-201ENSMUST00000100497 Rnase13Q5GAM7 153 aa6.55□□□□□ -1.36
Actb-201ENSMUST00000100497 Rpl37Q9D823 97 aa6.54□□□□□ -1.36
Actb-201ENSMUST00000100497 Cox6b2Q80ZN9 88 aa6.53□□□□□ -1.36
Actb-201ENSMUST00000100497 Gm3646F6S692 53 aa6.52□□□□□ -1.37
Actb-201ENSMUST00000100497 Kiaa1109A2AAE1 5005 aa6.5□□□□□ -1.37
Actb-201ENSMUST00000100497 Abca13Q5SSE9 5034 aa6.47□□□□□ -1.37
Actb-201ENSMUST00000100497 Gm17416Q30KP4 66 aa6.46□□□□□ -1.37
Actb-201ENSMUST00000100497 Lce1mQ9CR91 182 aa6.46□□□□□ -1.37
Actb-201ENSMUST00000100497 Gm9821Q8K076 103 aa6.46□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 137.7 ms