RNA–Protein interactions for RNA: ENSMUST00000100497.10

Actb-201, Transcript of Actin, cytoplasmic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actb, Length 1,920 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-201ENSMUST00000100497 NischQ80TM9 1593 aa24.52■■□□□ 1.52
Actb-201ENSMUST00000100497 Gm35339A0A140LHH9 1649 aa24.44■■□□□ 1.5
Actb-201ENSMUST00000100497 Abcc9P70170 1546 aa23.86■■□□□ 1.41
Actb-201ENSMUST00000100497 Abcc8B2RUS7 1588 aa23.35■■□□□ 1.33
Actb-201ENSMUST00000100497 Rtl1Q7M732 1744 aa22.34■■□□□ 1.17
Actb-201ENSMUST00000100497 Rhox8Q6VSS7 320 aa22.2■■□□□ 1.14
Actb-201ENSMUST00000100497 ScribQ80U72 1612 aa22.15■■□□□ 1.14
Actb-201ENSMUST00000100497 Dcaf1Q80TR8 1506 aa22.01■■□□□ 1.11
Actb-201ENSMUST00000100497 Ccdc180J3QNE4 1664 aa21.7■■□□□ 1.07
Actb-201ENSMUST00000100497 NacadQ5SWP3 1504 aa21.54■■□□□ 1.04
Actb-201ENSMUST00000100497 Kdm5dQ62240 1548 aa21.51■■□□□ 1.03
Actb-201ENSMUST00000100497 Rb1cc1Q9ESK9 1588 aa21.48■■□□□ 1.03
Actb-201ENSMUST00000100497 Baz1aO88379 1555 aa21.29■■□□□ 1
Actb-201ENSMUST00000100497 Zcchc6Q5BLK4 1491 aaKnown RBP21.15■□□□□ 0.98
Actb-201ENSMUST00000100497 Crybg2B7ZCC2 1516 aa21.14■□□□□ 0.98
Actb-201ENSMUST00000100497 Sycp2Q9CUU3 1500 aa21.09■□□□□ 0.97
Actb-201ENSMUST00000100497 Smarca2Q6DIC0 1577 aa20.76■□□□□ 0.91
Actb-201ENSMUST00000100497 BicraF8VPZ9 1578 aa20.7■□□□□ 0.9
Actb-201ENSMUST00000100497 HrcG5E8J6 738 aa20.61■□□□□ 0.89
Actb-201ENSMUST00000100497 Ccdc136Q3TVA9 1136 aa20.51■□□□□ 0.87
Actb-201ENSMUST00000100497 Trim41Q5NCC3 630 aa20.5■□□□□ 0.87
Actb-201ENSMUST00000100497 Brd4Q9ESU6 1400 aaKnown RBP20.31■□□□□ 0.84
Actb-201ENSMUST00000100497 Pds5bQ4VA53 1446 aaKnown RBP20.12■□□□□ 0.81
Actb-201ENSMUST00000100497 Cecr2E9Q2Z1 1453 aa20.06■□□□□ 0.8
Actb-201ENSMUST00000100497 Cep164Q5DU05 1446 aa20.03■□□□□ 0.8
Actb-201ENSMUST00000100497 Rpgrip1Q9EPQ2 1331 aa19.99■□□□□ 0.79
Actb-201ENSMUST00000100497 Cttnbp2B9EJA2 1648 aa19.99■□□□□ 0.79
Actb-201ENSMUST00000100497 Atad2bE9Q166 1460 aaKnown RBP19.98■□□□□ 0.79
Actb-201ENSMUST00000100497 Synj1Q8CHC4 1574 aa19.97■□□□□ 0.79
Actb-201ENSMUST00000100497 Smarca4Q3TKT4 1613 aaKnown RBP19.96■□□□□ 0.79
Actb-201ENSMUST00000100497 CftrP26361 1476 aa19.93■□□□□ 0.78
Actb-201ENSMUST00000100497 Golga3P55937 1487 aa19.92■□□□□ 0.78
Actb-201ENSMUST00000100497 Thoc2B1AZI6 1594 aaKnown RBP19.81■□□□□ 0.76
Actb-201ENSMUST00000100497 Iqgap2Q3UQ44 1575 aa19.79■□□□□ 0.76
Actb-201ENSMUST00000100497 Top2bQ64511 1612 aa19.78■□□□□ 0.76
Actb-201ENSMUST00000100497 Cngb1E1AZ71 1325 aa19.73■□□□□ 0.75
Actb-201ENSMUST00000100497 Ercc6F8VPZ5 1481 aa19.71■□□□□ 0.75
Actb-201ENSMUST00000100497 Esf1Q3V1V3 845 aaKnown RBP19.66■□□□□ 0.74
Actb-201ENSMUST00000100497 Rsf1E9PWW9 1441 aaKnown RBP19.66■□□□□ 0.74
Actb-201ENSMUST00000100497 Wdr62Q3U3T8 1523 aa19.57■□□□□ 0.72
Actb-201ENSMUST00000100497 Ccdc88bQ4QRL3 1481 aa19.53■□□□□ 0.72
Actb-201ENSMUST00000100497 Acin1Q9JIX8 1338 aaKnown RBP19.53■□□□□ 0.72
Actb-201ENSMUST00000100497 Fmn1Q05860 1466 aa19.52■□□□□ 0.72
Actb-201ENSMUST00000100497 Dnajc5bQ9CQ94 199 aa19.51■□□□□ 0.71
Actb-201ENSMUST00000100497 Frmpd1A2AKB4 1549 aa19.51■□□□□ 0.71
Actb-201ENSMUST00000100497 Chic1Q8CBW7 227 aa19.49■□□□□ 0.71
Actb-201ENSMUST00000100497 Cc2d2aQ8CFW7 1633 aa19.48■□□□□ 0.71
Actb-201ENSMUST00000100497 Fam135aQ6NS59 1506 aa19.44■□□□□ 0.7
Actb-201ENSMUST00000100497 Phldb1Q6PDH0 1371 aaKnown RBP19.35■□□□□ 0.69
Actb-201ENSMUST00000100497 Top2aQ01320 1528 aaKnown RBP19.34■□□□□ 0.69
Actb-201ENSMUST00000100497 Baz1bQ9Z277 1479 aa19.33■□□□□ 0.69
Actb-201ENSMUST00000100497 Unc13aQ4KUS2 1712 aa19.29■□□□□ 0.68
Actb-201ENSMUST00000100497 TnnQ80Z71 1560 aa19.28■□□□□ 0.68
Actb-201ENSMUST00000100497 Gab3Q8BSM5 595 aa19.23■□□□□ 0.67
Actb-201ENSMUST00000100497 Rapgef2Q8CHG7 1496 aa19.21■□□□□ 0.67
Actb-201ENSMUST00000100497 Lamc3Q9R0B6 1581 aa19.16■□□□□ 0.66
Actb-201ENSMUST00000100497 Ehmt2Q9Z148 1263 aaKnown RBP19.13■□□□□ 0.65
Actb-201ENSMUST00000100497 Ubl4bQ9CQ84 188 aa19.11■□□□□ 0.65
Actb-201ENSMUST00000100497 Cep162Q6ZQ06 1403 aa19.01■□□□□ 0.63
Actb-201ENSMUST00000100497 Mrc2Q64449 1479 aa18.97■□□□□ 0.63
Actb-201ENSMUST00000100497 Eif4g1Q6NZJ6 1600 aaKnown RBP18.96■□□□□ 0.63
Actb-201ENSMUST00000100497 Kif15Q6P9L6 1387 aa18.93■□□□□ 0.62
Actb-201ENSMUST00000100497 Ccdc18Q640L5 1455 aa18.92■□□□□ 0.62
Actb-201ENSMUST00000100497 Camsap1A2AHC3 1581 aa18.91■□□□□ 0.62
Actb-201ENSMUST00000100497 NrkQ9R0G8 1455 aa18.89■□□□□ 0.62
Actb-201ENSMUST00000100497 Npm2Q80W85 207 aa18.87■□□□□ 0.61
Actb-201ENSMUST00000100497 Cux2P70298 1426 aa18.83■□□□□ 0.61
Actb-201ENSMUST00000100497 Shroom4Q1W617 1475 aa18.82■□□□□ 0.6
Actb-201ENSMUST00000100497 Map3k1P53349 1493 aa18.81■□□□□ 0.6
Actb-201ENSMUST00000100497 NefmP08553 848 aa18.78■□□□□ 0.6
Actb-201ENSMUST00000100497 Grin2bQ01097 1482 aa18.75■□□□□ 0.59
Actb-201ENSMUST00000100497 Arhgap35Q91YM2 1499 aa18.73■□□□□ 0.59
Actb-201ENSMUST00000100497 Myt1lP97500 1187 aa18.68■□□□□ 0.58
Actb-201ENSMUST00000100497 Npm1Q61937 292 aaKnown RBP18.66■□□□□ 0.58
Actb-201ENSMUST00000100497 Clip1Q922J3 1391 aa18.66■□□□□ 0.58
Actb-201ENSMUST00000100497 PtprkP35822 1457 aa18.65■□□□□ 0.58
Actb-201ENSMUST00000100497 AqrQ8CFQ3 1481 aaKnown RBP18.64■□□□□ 0.57
Actb-201ENSMUST00000100497 Efcab5A0JP43 1406 aa18.63■□□□□ 0.57
Actb-201ENSMUST00000100497 Eea1Q8BL66 1411 aa18.63■□□□□ 0.57
Actb-201ENSMUST00000100497 Kif21aQ9QXL2 1672 aa18.63■□□□□ 0.57
Actb-201ENSMUST00000100497 Mroh2bQ7M6Y6 1581 aa18.62■□□□□ 0.57
Actb-201ENSMUST00000100497 Il27Q8K3I6 234 aa18.61■□□□□ 0.57
Actb-201ENSMUST00000100497 Mier1Q5UAK0 511 aa18.59■□□□□ 0.57
Actb-201ENSMUST00000100497 LrpprcQ6PB66 1392 aaKnown RBP18.56■□□□□ 0.56
Actb-201ENSMUST00000100497 Erich3F6QRE9 1637 aa18.54■□□□□ 0.56
Actb-201ENSMUST00000100497 PogzQ8BZH4 1409 aaKnown RBP18.53■□□□□ 0.56
Actb-201ENSMUST00000100497 Lrriq1Q0P5X1 1673 aa18.53■□□□□ 0.56
Actb-201ENSMUST00000100497 Arhgef5E9Q7D5 1581 aa18.49■□□□□ 0.55
Actb-201ENSMUST00000100497 Setd5Q5XJV7 1441 aa18.47■□□□□ 0.55
Actb-201ENSMUST00000100497 Duox2A2AQ99 1517 aa18.47■□□□□ 0.55
Actb-201ENSMUST00000100497 Dhx29Q6PGC1 1365 aaKnown RBP18.46■□□□□ 0.55
Actb-201ENSMUST00000100497 UbtfP25976 765 aaKnown RBP18.46■□□□□ 0.55
Actb-201ENSMUST00000100497 Zeb1Q64318 1117 aa18.46■□□□□ 0.55
Actb-201ENSMUST00000100497 Polr1aO35134 1717 aaKnown RBP18.46■□□□□ 0.55
Actb-201ENSMUST00000100497 Carmil1Q6EDY6 1374 aa18.46■□□□□ 0.55
Actb-201ENSMUST00000100497 Arap1Q4LDD4 1452 aa18.44■□□□□ 0.54
Actb-201ENSMUST00000100497 Crocc2F6XLV1 1638 aa18.43■□□□□ 0.54
Actb-201ENSMUST00000100497 Tiam1Q60610 1591 aa18.4■□□□□ 0.54
Actb-201ENSMUST00000100497 SynmQ70IV5 1561 aa18.4■□□□□ 0.54
Actb-201ENSMUST00000100497 Ankrd26Q811D2 1581 aa18.4■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 104.5 ms