RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Msrb1Q9JLC3 116 aa4.41□□□□□ -1.7
Scn8a-202ENSMUST00000096198 Igkv1-35A0A0G2JDE5 120 aa4.4□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Gm27235Q3UW50 83 aa4.4□□□□□ -1.71
Scn8a-202ENSMUST00000096198 AI606181Q8C7B9 129 aa4.4□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Anapc11Q9CPX9 84 aa4.4□□□□□ -1.71
Scn8a-202ENSMUST00000096198 LbhQ9CX60 105 aa4.4□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Gm10135F6TEE5 83 aa4.39□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Gm10139O88245 57 aa4.39□□□□□ -1.71
Scn8a-202ENSMUST00000096198 A930002H24RikQ8C8Y3 163 aa4.39□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Cox6cQ9CPQ1 76 aa4.39□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Ube2aQ9Z255 152 aa4.39□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Gm11639A0A1D5RLM8 5808 aa4.39□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Igkv3-7A0A0G2JE31 119 aa4.38□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Igkv1-122A0A140T8M9 119 aa4.38□□□□□ -1.71
Scn8a-202ENSMUST00000096198 4930524J08RikQ9CUJ5 163 aa4.38□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Krtap15-1Q9QZU5 150 aa4.38□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Gm26602M0QWA4 95 aa4.37□□□□□ -1.71
Scn8a-202ENSMUST00000096198 NrepQ07475 68 aa4.37□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Defb37Q7TMD2 62 aa4.37□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Igkv1-110A0A0B4J1I0 119 aa4.36□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Gm20726G3UX18 150 aa4.36□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Sigmar1O55242 223 aa4.36□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Tmem243B2RVB9 118 aa4.35□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Defa28D3Z1V9 94 aa4.35□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Ccdc179J3QM76 67 aa4.35□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Hint1P70349 126 aaKnown RBP4.35□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Defb39Q70KL3 74 aa4.35□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Igkv2-109A0A075B5K6 120 aa4.34□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Vpreb3D3Z6J4 130 aa4.34□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Mtatp8P03930 67 aa4.34□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Acyp1P56376 99 aa4.34□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Odf3bQ5M8M2 238 aa4.34□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Ube2v1Q9CZY3 147 aa4.34□□□□□ -1.71
Scn8a-202ENSMUST00000096198 Igkv3-5A0A140T8M6 119 aa4.33□□□□□ -1.72
Scn8a-202ENSMUST00000096198 A030003K21RikA0A1Y7VIM3 128 aa4.33□□□□□ -1.72
Scn8a-202ENSMUST00000096198 1700020N15RikL7MTX3 112 aa4.33□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Vpreb1P13372 142 aa4.33□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Krtap19-2Q925I0 141 aa4.33□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Igkv8-26A0A075B5N5 123 aa4.32□□□□□ -1.72
Scn8a-202ENSMUST00000096198 A0A286YE02 88 aa4.32□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Gm17689B3GLJ4 109 aa4.32□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Gm10100J3QK64 120 aa4.32□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Gm10767Q3TQP0 103 aa4.32□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Znf706Q9D115 76 aaKnown RBP4.32□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Wfdc13Q5DQQ6 81 aa4.31□□□□□ -1.72
Scn8a-202ENSMUST00000096198 9530003J23RikQ8BM26 151 aa4.31□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Gm26920S4R2A5 56 aa4.31□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Gm10197F6QEY5 67 aa4.3□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Gm20604F8WIA3 75 aa4.3□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Krtap9-3Q3V2C1 136 aa4.3□□□□□ -1.72
Scn8a-202ENSMUST00000096198 A830005F24RikQ8BRT5 167 aa4.3□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Gm37389A0A0A6YW05 95 aa4.29□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Ifitm6A0A1B0GS75 124 aa4.29□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Gm10401E9Q3K6 71 aa4.29□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Gpr98Q8VHN7 6298 aaKnown RBP4.29□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Ighv10-3A0A075B5T6 119 aa4.28□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Cypt14J3QPF7 87 aa4.28□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Lamtor3O88653 124 aa4.28□□□□□ -1.72
Scn8a-202ENSMUST00000096198 P06320 134 aa4.28□□□□□ -1.72
Scn8a-202ENSMUST00000096198 SmcpP15265 143 aa4.28□□□□□ -1.72
Scn8a-202ENSMUST00000096198 Vps25Q9CQ80 176 aa4.27□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Gm6358A0A087WPH4 74 aa4.26□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Igkv8-27A0A0G2JF28 120 aa4.26□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Igkv8-30A0A140T8M3 121 aa4.26□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Sfta2E9PXB6 77 aa4.26□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Cox6a2P43023 97 aa4.26□□□□□ -1.73
Scn8a-202ENSMUST00000096198 2310046K23RikA0A0A6YVW6 87 aa4.25□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Q8BT88 171 aa4.25□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Gm10308Q9CVR5 141 aa4.25□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Chchd10Q7TNL9 138 aa4.24□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Igkv8-28A0A0G2JE47 121 aa4.23□□□□□ -1.73
Scn8a-202ENSMUST00000096198 1700018G05RikA0A1B0GSI2 66 aa4.23□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Sprr2gO70558 76 aa4.23□□□□□ -1.73
Scn8a-202ENSMUST00000096198 A730071L15RikQ8C4X0 137 aa4.23□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Gm12353A2AGJ4 60 aa4.22□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Defa25Q5G864 92 aa4.22□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Macf1Q9QXZ0 7354 aaKnown RBP4.22□□□□□ -1.73
Scn8a-202ENSMUST00000096198 Sprr2jO70561 109 aa4.21□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Rbm3O89086 153 aaKnown RBP4.21□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Igkv3-10A0A0G2JGN0 119 aa4.2□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Pde6gP09174 87 aa4.2□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Xcl1P47993 114 aa4.2□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Pxt1Q8K459 51 aa4.18□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Gm16253D3Z167 63 aa4.17□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Igkv3-4A0A140T8Q4 119 aa4.16□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Lce1kJ3QP15 125 aa4.16□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Spaca4Q80ZQ0 127 aa4.16□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Gm37013Q8K491 104 aa4.16□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Ormdl1Q921I0 153 aa4.16□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Cby1Q9D1C2 127 aa4.16□□□□□ -1.74
Scn8a-202ENSMUST00000096198 Trav14d-3-dv8A0A075B619 120 aa4.15□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Gm6217A0A1Y7VJK9 128 aa4.15□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Gm44790A0A0N4SV91 103 aa4.14□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Gm21886J3QJU9 214 aa4.14□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Tmem213Q08EA8 116 aa4.14□□□□□ -1.75
Scn8a-202ENSMUST00000096198 4930535I16RikQ9CUI2 172 aa4.14□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Igkv8-21A0A140T8P7 120 aa4.13□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Gm2310J3QNJ2 377 aa4.13□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Rps29P62274 56 aa4.13□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Gtf2h5Q8K2X8 71 aa4.13□□□□□ -1.75
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms