RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Dph3Q8K0W9 82 aa11.94□□□□□ -0.5
Ssbp4-201ENSMUST00000049908 Hist1h4aP62806 103 aaKnown RBP11.93□□□□□ -0.5
Ssbp4-201ENSMUST00000049908 A730071L15RikQ8C4X0 137 aa11.93□□□□□ -0.5
Ssbp4-201ENSMUST00000049908 Gm5965D3Z724 196 aa11.92□□□□□ -0.5
Ssbp4-201ENSMUST00000049908 Gm21886J3QJU9 214 aa11.9□□□□□ -0.5
Ssbp4-201ENSMUST00000049908 Sprr2jO70561 109 aa11.9□□□□□ -0.5
Ssbp4-201ENSMUST00000049908 Rbm3O89086 153 aaKnown RBP11.9□□□□□ -0.5
Ssbp4-201ENSMUST00000049908 Gm16253D3Z167 63 aa11.89□□□□□ -0.51
Ssbp4-201ENSMUST00000049908 Cystm1Q8K353 104 aa11.89□□□□□ -0.51
Ssbp4-201ENSMUST00000049908 Ormdl1Q921I0 153 aa11.89□□□□□ -0.51
Ssbp4-201ENSMUST00000049908 Tmem254aP0DN89 123 aa11.89□□□□□ -0.51
Ssbp4-201ENSMUST00000049908 Tmem254bP0DN90 123 aa11.89□□□□□ -0.51
Ssbp4-201ENSMUST00000049908 Tmem254cP0DN91 123 aa11.89□□□□□ -0.51
Ssbp4-201ENSMUST00000049908 Rps29P62274 56 aa11.89□□□□□ -0.51
Ssbp4-201ENSMUST00000049908 Prr13Q9CQJ5 137 aa11.89□□□□□ -0.51
Ssbp4-201ENSMUST00000049908 4930535I16RikQ9CUI2 172 aa11.83□□□□□ -0.52
Ssbp4-201ENSMUST00000049908 Gm2310J3QNJ2 377 aa11.83□□□□□ -0.52
Ssbp4-201ENSMUST00000049908 Igkv8-21A0A140T8P7 120 aa11.8□□□□□ -0.52
Ssbp4-201ENSMUST00000049908 Ubl5Q9EPV8 73 aa11.79□□□□□ -0.52
Ssbp4-201ENSMUST00000049908 Gm28539A0A087WSL9 92 aa11.78□□□□□ -0.52
Ssbp4-201ENSMUST00000049908 Gm44790A0A0N4SV91 103 aa11.75□□□□□ -0.53
Ssbp4-201ENSMUST00000049908 Gm5767A0A0J9YTU8 78 aa11.71□□□□□ -0.53
Ssbp4-201ENSMUST00000049908 Apoc4Q61268 124 aa11.71□□□□□ -0.53
Ssbp4-201ENSMUST00000049908 SmcpP15265 143 aa11.7□□□□□ -0.54
Ssbp4-201ENSMUST00000049908 Gm37013Q8K491 104 aa11.7□□□□□ -0.54
Ssbp4-201ENSMUST00000049908 UqcrqQ9CQ69 82 aa11.69□□□□□ -0.54
Ssbp4-201ENSMUST00000049908 Mrpl34Q99N91 92 aa11.68□□□□□ -0.54
Ssbp4-201ENSMUST00000049908 Ndufc1Q9CQY9 76 aa11.67□□□□□ -0.54
Ssbp4-201ENSMUST00000049908 Gm20604F8WIA3 75 aa11.66□□□□□ -0.54
Ssbp4-201ENSMUST00000049908 Serp2Q6TAW2 65 aa11.66□□□□□ -0.54
Ssbp4-201ENSMUST00000049908 7530416G11RikJ3QJX6 159 aa11.65□□□□□ -0.54
Ssbp4-201ENSMUST00000049908 C130032M10RikQ8C888 123 aa11.64□□□□□ -0.55
Ssbp4-201ENSMUST00000049908 4930518I15RikQ3V2W7 57 aa11.56□□□□□ -0.56
Ssbp4-201ENSMUST00000049908 Gm9821Q8K076 103 aa11.56□□□□□ -0.56
Ssbp4-201ENSMUST00000049908 Cypt15B1AXS0 87 aa11.54□□□□□ -0.56
Ssbp4-201ENSMUST00000049908 Defa21Q8C1P2 93 aa11.51□□□□□ -0.57
Ssbp4-201ENSMUST00000049908 Gm11939A2A592 99 aa11.51□□□□□ -0.57
Ssbp4-201ENSMUST00000049908 Reg3aO09037 175 aa11.51□□□□□ -0.57
Ssbp4-201ENSMUST00000049908 MplkipQ9D011 178 aa11.5□□□□□ -0.57
Ssbp4-201ENSMUST00000049908 Scgb1b2O35176 93 aa11.49□□□□□ -0.57
Ssbp4-201ENSMUST00000049908 Smim20D3Z7Q2 69 aa11.46□□□□□ -0.57
Ssbp4-201ENSMUST00000049908 Tmem258P61166 79 aa11.46□□□□□ -0.57
Ssbp4-201ENSMUST00000049908 Gm19935A0A1B0GSF9 52 aa11.42□□□□□ -0.58
Ssbp4-201ENSMUST00000049908 Krtap1-3A2A588 173 aa11.42□□□□□ -0.58
Ssbp4-201ENSMUST00000049908 Gm26620Q9CY65 116 aa11.4□□□□□ -0.58
Ssbp4-201ENSMUST00000049908 ZanO88799 5376 aa11.4□□□□□ -0.59
Ssbp4-201ENSMUST00000049908 Rps28P62858 69 aaKnown RBP11.39□□□□□ -0.59
Ssbp4-201ENSMUST00000049908 SvipQ3UZP4 77 aa11.38□□□□□ -0.59
Ssbp4-201ENSMUST00000049908 Krtap15-1Q9QZU5 150 aa11.38□□□□□ -0.59
Ssbp4-201ENSMUST00000049908 Sec61bQ9CQS8 96 aaKnown RBP11.37□□□□□ -0.59
Ssbp4-201ENSMUST00000049908 2310057N15RikQ9D6T8 200 aa11.37□□□□□ -0.59
Ssbp4-201ENSMUST00000049908 Fam229bQ8CF36 80 aa11.36□□□□□ -0.59
Ssbp4-201ENSMUST00000049908 Igkv8-19A0A0G2JFN8 121 aa11.35□□□□□ -0.59
Ssbp4-201ENSMUST00000049908 Igkv3-3A0A140T8Q0 119 aa11.35□□□□□ -0.59
Ssbp4-201ENSMUST00000049908 Naa38Q9D2U5 125 aa11.35□□□□□ -0.59
Ssbp4-201ENSMUST00000049908 B230307C23RikQ8BLB2 64 aa11.26□□□□□ -0.61
Ssbp4-201ENSMUST00000049908 BikO70337 150 aa11.25□□□□□ -0.61
Ssbp4-201ENSMUST00000049908 Smlr1J3QMJ4 66 aa11.21□□□□□ -0.61
Ssbp4-201ENSMUST00000049908 Fat4Q2PZL6 4981 aa11.2□□□□□ -0.62
Ssbp4-201ENSMUST00000049908 Crct1Q6PAI5 102 aa11.19□□□□□ -0.62
Ssbp4-201ENSMUST00000049908 Prr15lQ8JZM2 100 aa11.19□□□□□ -0.62
Ssbp4-201ENSMUST00000049908 Defb13Q8R2I4 64 aa11.19□□□□□ -0.62
Ssbp4-201ENSMUST00000049908 Rpl37Q9D823 97 aa11.19□□□□□ -0.62
Ssbp4-201ENSMUST00000049908 Gm10267M0QWD8 85 aa11.18□□□□□ -0.62
Ssbp4-201ENSMUST00000049908 Samd13D3YUG0 102 aa11.12□□□□□ -0.63
Ssbp4-201ENSMUST00000049908 2310034C09RikQ9D746 214 aa11.12□□□□□ -0.63
Ssbp4-201ENSMUST00000049908 LorP18165 486 aa11.09□□□□□ -0.63
Ssbp4-201ENSMUST00000049908 Serp1Q9Z1W5 66 aa11.08□□□□□ -0.64
Ssbp4-201ENSMUST00000049908 Coa6Q8BGD8 79 aa11.06□□□□□ -0.64
Ssbp4-201ENSMUST00000049908 A0A286YE49 62 aa11.05□□□□□ -0.64
Ssbp4-201ENSMUST00000049908 Pet100P0DJE0 76 aa11.05□□□□□ -0.64
Ssbp4-201ENSMUST00000049908 Spink8Q09TK9 105 aa11.03□□□□□ -0.64
Ssbp4-201ENSMUST00000049908 H2al1aQ5M8Q2 105 aa11□□□□□ -0.65
Ssbp4-201ENSMUST00000049908 Spint4Q9D263 159 aa11□□□□□ -0.65
Ssbp4-201ENSMUST00000049908 Rnf213E9Q555 5152 aaKnown RBP11□□□□□ -0.65
Ssbp4-201ENSMUST00000049908 Krtap3-2Q9D638 99 aa10.98□□□□□ -0.65
Ssbp4-201ENSMUST00000049908 Krtap3-3Q9D7P0 99 aa10.98□□□□□ -0.65
Ssbp4-201ENSMUST00000049908 Atox1O08997 68 aaKnown RBP10.96□□□□□ -0.65
Ssbp4-201ENSMUST00000049908 SnurfQ9WU12 71 aa10.95□□□□□ -0.66
Ssbp4-201ENSMUST00000049908 Krtap16-3Q8C1I6 86 aa10.92□□□□□ -0.66
Ssbp4-201ENSMUST00000049908 Krtap19-3Q925H6 87 aa10.91□□□□□ -0.66
Ssbp4-201ENSMUST00000049908 Krtap19-1Q925H2 87 aa10.89□□□□□ -0.67
Ssbp4-201ENSMUST00000049908 Brk1Q91VR8 75 aa10.88□□□□□ -0.67
Ssbp4-201ENSMUST00000049908 Gm19402J3QJV4 266 aa10.87□□□□□ -0.67
Ssbp4-201ENSMUST00000049908 Rnase13Q5GAM7 153 aa10.87□□□□□ -0.67
Ssbp4-201ENSMUST00000049908 Cdc42se1Q8BHL7 80 aa10.87□□□□□ -0.67
Ssbp4-201ENSMUST00000049908 1700074P13RikQ9D9G7 251 aa10.83□□□□□ -0.68
Ssbp4-201ENSMUST00000049908 1700042G07RikB1AUF7 90 aa10.81□□□□□ -0.68
Ssbp4-201ENSMUST00000049908 Gm10061D3Z714 54 aa10.79□□□□□ -0.68
Ssbp4-201ENSMUST00000049908 Coa5Q99M07 74 aa10.78□□□□□ -0.68
Ssbp4-201ENSMUST00000049908 Gm10318A0A1W2P728 225 aa10.77□□□□□ -0.69
Ssbp4-201ENSMUST00000049908 Gm4491E0CX42 125 aa10.76□□□□□ -0.69
Ssbp4-201ENSMUST00000049908 Fam229aB2KGE5 128 aa10.73□□□□□ -0.69
Ssbp4-201ENSMUST00000049908 Krtap1-4Q3V2D6 188 aa10.72□□□□□ -0.69
Ssbp4-201ENSMUST00000049908 Gm10337F7DEP7 55 aa10.63□□□□□ -0.71
Ssbp4-201ENSMUST00000049908 Chtf8P0CG14 533 aa10.63□□□□□ -0.71
Ssbp4-201ENSMUST00000049908 Gm17416Q30KP4 66 aa10.63□□□□□ -0.71
Ssbp4-201ENSMUST00000049908 Gm11562A0PK51 136 aa10.62□□□□□ -0.71
Ssbp4-201ENSMUST00000049908 H2al1bA0A087WP11 105 aa10.59□□□□□ -0.71
Ssbp4-201ENSMUST00000049908 Gm10197F6QEY5 67 aa10.59□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 142.6 ms