RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Gm35339A0A140LHH9 1649 aa47.45■■■■■ 5.19
Ssbp4-201ENSMUST00000049908 NischQ80TM9 1593 aa46.83■■■■■ 5.09
Ssbp4-201ENSMUST00000049908 Abcc9P70170 1546 aa45.3■■■■■ 4.84
Ssbp4-201ENSMUST00000049908 Abcc8B2RUS7 1588 aa45.28■■■■■ 4.84
Ssbp4-201ENSMUST00000049908 ScribQ80U72 1612 aa43.64■■■■■ 4.58
Ssbp4-201ENSMUST00000049908 NacadQ5SWP3 1504 aa42.3■■■■■ 4.36
Ssbp4-201ENSMUST00000049908 Kdm5dQ62240 1548 aa42.2■■■■■ 4.35
Ssbp4-201ENSMUST00000049908 Dcaf1Q80TR8 1506 aa41.7■■■■■ 4.27
Ssbp4-201ENSMUST00000049908 Sycp2Q9CUU3 1500 aa41.47■■■■■ 4.23
Ssbp4-201ENSMUST00000049908 BicraF8VPZ9 1578 aa40.88■■■■■ 4.13
Ssbp4-201ENSMUST00000049908 Rb1cc1Q9ESK9 1588 aa40.8■■■■■ 4.12
Ssbp4-201ENSMUST00000049908 Rhox8Q6VSS7 320 aa40.42■■■■■ 4.06
Ssbp4-201ENSMUST00000049908 Ccdc180J3QNE4 1664 aa40.25■■■■■ 4.03
Ssbp4-201ENSMUST00000049908 Baz1aO88379 1555 aa40.24■■■■■ 4.03
Ssbp4-201ENSMUST00000049908 Crybg2B7ZCC2 1516 aa40.15■■■■■ 4.02
Ssbp4-201ENSMUST00000049908 Pds5bQ4VA53 1446 aaKnown RBP39.77■■■■□ 3.96
Ssbp4-201ENSMUST00000049908 Dnajc5bQ9CQ94 199 aa39.75■■■■□ 3.95
Ssbp4-201ENSMUST00000049908 Zcchc6Q5BLK4 1491 aaKnown RBP39.62■■■■□ 3.93
Ssbp4-201ENSMUST00000049908 Thoc2B1AZI6 1594 aaKnown RBP39.4■■■■□ 3.9
Ssbp4-201ENSMUST00000049908 Atad2bE9Q166 1460 aaKnown RBP39.39■■■■□ 3.9
Ssbp4-201ENSMUST00000049908 Smarca2Q6DIC0 1577 aa39.05■■■■□ 3.84
Ssbp4-201ENSMUST00000049908 Smarca4Q3TKT4 1613 aaKnown RBP39.04■■■■□ 3.84
Ssbp4-201ENSMUST00000049908 Cecr2E9Q2Z1 1453 aa38.93■■■■□ 3.82
Ssbp4-201ENSMUST00000049908 Ercc6F8VPZ5 1481 aa38.89■■■■□ 3.82
Ssbp4-201ENSMUST00000049908 Iqgap2Q3UQ44 1575 aa38.82■■■■□ 3.81
Ssbp4-201ENSMUST00000049908 Cc2d2aQ8CFW7 1633 aa38.77■■■■□ 3.8
Ssbp4-201ENSMUST00000049908 Fam135aQ6NS59 1506 aa38.52■■■■□ 3.76
Ssbp4-201ENSMUST00000049908 Wdr62Q3U3T8 1523 aa38.5■■■■□ 3.75
Ssbp4-201ENSMUST00000049908 Frmpd1A2AKB4 1549 aa38.46■■■■□ 3.75
Ssbp4-201ENSMUST00000049908 Rtl1Q7M732 1744 aa38.41■■■■□ 3.74
Ssbp4-201ENSMUST00000049908 Phldb1Q6PDH0 1371 aaKnown RBP38.27■■■■□ 3.72
Ssbp4-201ENSMUST00000049908 Baz1bQ9Z277 1479 aa38.14■■■■□ 3.7
Ssbp4-201ENSMUST00000049908 CftrP26361 1476 aa38.07■■■■□ 3.68
Ssbp4-201ENSMUST00000049908 Cttnbp2B9EJA2 1648 aa38.01■■■■□ 3.67
Ssbp4-201ENSMUST00000049908 Brd4Q9ESU6 1400 aaKnown RBP37.97■■■■□ 3.67
Ssbp4-201ENSMUST00000049908 Synj1Q8CHC4 1574 aa37.95■■■■□ 3.67
Ssbp4-201ENSMUST00000049908 Ubl4bQ9CQ84 188 aa37.91■■■■□ 3.66
Ssbp4-201ENSMUST00000049908 Unc13aQ4KUS2 1712 aa37.9■■■■□ 3.66
Ssbp4-201ENSMUST00000049908 Ccdc136Q3TVA9 1136 aa37.85■■■■□ 3.65
Ssbp4-201ENSMUST00000049908 Mrc2Q64449 1479 aa37.62■■■■□ 3.61
Ssbp4-201ENSMUST00000049908 Esf1Q3V1V3 845 aaKnown RBP37.39■■■■□ 3.58
Ssbp4-201ENSMUST00000049908 Trim41Q5NCC3 630 aa37.33■■■■□ 3.57
Ssbp4-201ENSMUST00000049908 Rsf1E9PWW9 1441 aaKnown RBP37.16■■■■□ 3.54
Ssbp4-201ENSMUST00000049908 Kif15Q6P9L6 1387 aa37.08■■■■□ 3.53
Ssbp4-201ENSMUST00000049908 Cux2P70298 1426 aa37.07■■■■□ 3.52
Ssbp4-201ENSMUST00000049908 Lamc3Q9R0B6 1581 aa36.96■■■■□ 3.51
Ssbp4-201ENSMUST00000049908 Lrriq1Q0P5X1 1673 aa36.77■■■■□ 3.48
Ssbp4-201ENSMUST00000049908 Kif21aQ9QXL2 1672 aa36.74■■■■□ 3.47
Ssbp4-201ENSMUST00000049908 Npm1Q61937 292 aaKnown RBP36.69■■■■□ 3.46
Ssbp4-201ENSMUST00000049908 Golga3P55937 1487 aa36.63■■■■□ 3.45
Ssbp4-201ENSMUST00000049908 Top2bQ64511 1612 aa36.58■■■■□ 3.45
Ssbp4-201ENSMUST00000049908 Cep164Q5DU05 1446 aa36.56■■■■□ 3.44
Ssbp4-201ENSMUST00000049908 TnnQ80Z71 1560 aa36.53■■■■□ 3.44
Ssbp4-201ENSMUST00000049908 Cngb1E1AZ71 1325 aa36.43■■■■□ 3.42
Ssbp4-201ENSMUST00000049908 Ccdc18Q640L5 1455 aa36.41■■■■□ 3.42
Ssbp4-201ENSMUST00000049908 Il27Q8K3I6 234 aa36.29■■■■□ 3.4
Ssbp4-201ENSMUST00000049908 Dhx29Q6PGC1 1365 aaKnown RBP36.29■■■■□ 3.4
Ssbp4-201ENSMUST00000049908 Camsap1A2AHC3 1581 aa36.28■■■■□ 3.4
Ssbp4-201ENSMUST00000049908 Eif4g3Q80XI3 1579 aaKnown RBP36.26■■■■□ 3.4
Ssbp4-201ENSMUST00000049908 LrpprcQ6PB66 1392 aaKnown RBP36.25■■■■□ 3.39
Ssbp4-201ENSMUST00000049908 Fmn1Q05860 1466 aa36.22■■■■□ 3.39
Ssbp4-201ENSMUST00000049908 Urb2E9Q7L1 1524 aaKnown RBP36.2■■■■□ 3.39
Ssbp4-201ENSMUST00000049908 Plb1Q3TTY0 1478 aa36.16■■■■□ 3.38
Ssbp4-201ENSMUST00000049908 Crocc2F6XLV1 1638 aa36.09■■■■□ 3.37
Ssbp4-201ENSMUST00000049908 PogzQ8BZH4 1409 aaKnown RBP36.02■■■■□ 3.36
Ssbp4-201ENSMUST00000049908 Dnajc5P60904 198 aa35.99■■■■□ 3.35
Ssbp4-201ENSMUST00000049908 Ift140E9PY46 1464 aa35.86■■■■□ 3.33
Ssbp4-201ENSMUST00000049908 Shroom2A2ALU4 1481 aa35.85■■■■□ 3.33
Ssbp4-201ENSMUST00000049908 Duox2A2AQ99 1517 aa35.85■■■■□ 3.33
Ssbp4-201ENSMUST00000049908 Grin2bQ01097 1482 aa35.8■■■■□ 3.32
Ssbp4-201ENSMUST00000049908 Rusc2Q80U22 1514 aa35.7■■■■□ 3.31
Ssbp4-201ENSMUST00000049908 Ccdc88bQ4QRL3 1481 aa35.63■■■■□ 3.29
Ssbp4-201ENSMUST00000049908 Efcab5A0JP43 1406 aa35.62■■■■□ 3.29
Ssbp4-201ENSMUST00000049908 Disp1Q3TDN0 1521 aa35.6■■■■□ 3.29
Ssbp4-201ENSMUST00000049908 Samd9lQ69Z37 1561 aa35.53■■■■□ 3.28
Ssbp4-201ENSMUST00000049908 Top2aQ01320 1528 aaKnown RBP35.51■■■■□ 3.28
Ssbp4-201ENSMUST00000049908 Pabpn1Q8CCS6 302 aaKnown RBP35.48■■■■□ 3.27
Ssbp4-201ENSMUST00000049908 Nup160Q9Z0W3 1402 aaKnown RBP35.45■■■■□ 3.26
Ssbp4-201ENSMUST00000049908 Pbrm1Q8BSQ9 1634 aaKnown RBP35.44■■■■□ 3.26
Ssbp4-201ENSMUST00000049908 NrkQ9R0G8 1455 aa35.43■■■■□ 3.26
Ssbp4-201ENSMUST00000049908 Setd1bQ8CFT2 1985 aa35.42■■■■□ 3.26
Ssbp4-201ENSMUST00000049908 Cc2d2bA0A286YDU8 1405 aa35.41■■■■□ 3.26
Ssbp4-201ENSMUST00000049908 Chic1Q8CBW7 227 aa35.38■■■■□ 3.25
Ssbp4-201ENSMUST00000049908 Col17a1Q07563 1470 aa35.32■■■■□ 3.24
Ssbp4-201ENSMUST00000049908 Rad54l2Q99NG0 1466 aa35.31■■■■□ 3.24
Ssbp4-201ENSMUST00000049908 Grin2aP35436 1464 aa35.24■■■■□ 3.23
Ssbp4-201ENSMUST00000049908 Pelp1Q9DBD5 1123 aaKnown RBP35.23■■■■□ 3.23
Ssbp4-201ENSMUST00000049908 Shroom4Q1W617 1475 aa35.23■■■■□ 3.23
Ssbp4-201ENSMUST00000049908 Magi3Q9EQJ9 1476 aa35.22■■■■□ 3.23
Ssbp4-201ENSMUST00000049908 PtprkP35822 1457 aa35.2■■■■□ 3.23
Ssbp4-201ENSMUST00000049908 AqrQ8CFQ3 1481 aaKnown RBP35.14■■■■□ 3.22
Ssbp4-201ENSMUST00000049908 SynmQ70IV5 1561 aa35.06■■■■□ 3.2
Ssbp4-201ENSMUST00000049908 Zcchc11B2RX14 1644 aaKnown RBP35.02■■■■□ 3.2
Ssbp4-201ENSMUST00000049908 Gpatch8A2A6A1 1505 aa35.02■■■■□ 3.2
Ssbp4-201ENSMUST00000049908 Fgd6Q69ZL1 1399 aa35.02■■■■□ 3.2
Ssbp4-201ENSMUST00000049908 Pla2r1Q62028 1487 aa35.01■■■■□ 3.2
Ssbp4-201ENSMUST00000049908 Zeb1Q64318 1117 aa34.88■■■■□ 3.17
Ssbp4-201ENSMUST00000049908 HrcG5E8J6 738 aa34.79■■■■□ 3.16
Ssbp4-201ENSMUST00000049908 Mroh2bQ7M6Y6 1581 aa34.78■■■■□ 3.16
Ssbp4-201ENSMUST00000049908 Npm2Q80W85 207 aa34.75■■■■□ 3.15
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms