RNA–Protein interactions for RNA: ENSMUST00000043359.8

Smarca5-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarca5, Length 6,113 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca5-201ENSMUST00000043359 Srrm2Q8BTI8 2703 aaKnown RBP8.3□□□□□ -1.08
Smarca5-201ENSMUST00000043359 Col6a3E9PWQ3 3284 aa8.3□□□□□ -1.08
Smarca5-201ENSMUST00000043359 A730071L15RikQ8C4X0 137 aa8.29□□□□□ -1.08
Smarca5-201ENSMUST00000043359 Pdzd2E9Q1M1 2796 aa8.28□□□□□ -1.08
Smarca5-201ENSMUST00000043359 Romo1P60603 79 aa8.28□□□□□ -1.08
Smarca5-201ENSMUST00000043359 DmdP11531 3678 aa8.28□□□□□ -1.08
Smarca5-201ENSMUST00000043359 Gm10382Q3V0T5 144 aa8.27□□□□□ -1.08
Smarca5-201ENSMUST00000043359 Celsr3Q91ZI0 3301 aa8.26□□□□□ -1.09
Smarca5-201ENSMUST00000043359 Gm2310J3QNJ2 377 aa8.25□□□□□ -1.09
Smarca5-201ENSMUST00000043359 Wdfy3Q6VNB8 3508 aa8.25□□□□□ -1.09
Smarca5-201ENSMUST00000043359 Tenm3Q9WTS6 2715 aa8.23□□□□□ -1.09
Smarca5-201ENSMUST00000043359 LrbaQ9ESE1 2856 aa8.21□□□□□ -1.1
Smarca5-201ENSMUST00000043359 VcanQ62059 3357 aa8.2□□□□□ -1.1
Smarca5-201ENSMUST00000043359 Tenm1Q9WTS4 2731 aa8.19□□□□□ -1.1
Smarca5-201ENSMUST00000043359 Brca2P97929 3329 aa8.18□□□□□ -1.1
Smarca5-201ENSMUST00000043359 TgO08710 2766 aa8.11□□□□□ -1.11
Smarca5-201ENSMUST00000043359 A930033H14RikG5E8X6 103 aa8.09□□□□□ -1.11
Smarca5-201ENSMUST00000043359 Myo15aQ9QZZ4 3511 aa8.08□□□□□ -1.12
Smarca5-201ENSMUST00000043359 Rps29P62274 56 aa8.07□□□□□ -1.12
Smarca5-201ENSMUST00000043359 Gm21887J3QQ04 176 aa8.07□□□□□ -1.12
Smarca5-201ENSMUST00000043359 Gm3646F6S692 53 aa8.06□□□□□ -1.12
Smarca5-201ENSMUST00000043359 Helz2E9QAM5 2947 aaKnown RBP8.06□□□□□ -1.12
Smarca5-201ENSMUST00000043359 SpegQ62407 3262 aa8.03□□□□□ -1.12
Smarca5-201ENSMUST00000043359 D6Ertd527eA0A0N4SWI3 464 aa8□□□□□ -1.13
Smarca5-201ENSMUST00000043359 Zfhx3Q61329 3726 aa7.99□□□□□ -1.13
Smarca5-201ENSMUST00000043359 Gm9918Q8BUR5 174 aa7.98□□□□□ -1.13
Smarca5-201ENSMUST00000043359 Cox6b2Q80ZN9 88 aa7.97□□□□□ -1.13
Smarca5-201ENSMUST00000043359 ApcQ61315 2845 aa7.97□□□□□ -1.13
Smarca5-201ENSMUST00000043359 Dchs1E9PVD3 3291 aa7.91□□□□□ -1.14
Smarca5-201ENSMUST00000043359 Gm9736A0A1W2P7N1 277 aa7.89□□□□□ -1.15
Smarca5-201ENSMUST00000043359 Gm10318A0A1W2P728 225 aa7.8□□□□□ -1.16
Smarca5-201ENSMUST00000043359 Tenm2Q9WTS5 2764 aa7.78□□□□□ -1.16
Smarca5-201ENSMUST00000043359 Tnp1P10856 55 aa7.74□□□□□ -1.17
Smarca5-201ENSMUST00000043359 Gm884A2A9H6 3643 aa7.72□□□□□ -1.17
Smarca5-201ENSMUST00000043359 RelnQ60841 3461 aa7.71□□□□□ -1.18
Smarca5-201ENSMUST00000043359 OtogO55225 2910 aa7.7□□□□□ -1.18
Smarca5-201ENSMUST00000043359 4933415A04RikQ9D443 101 aa7.67□□□□□ -1.18
Smarca5-201ENSMUST00000043359 SpenQ62504 3644 aaKnown RBP7.67□□□□□ -1.18
Smarca5-201ENSMUST00000043359 Muc5acE9QAQ8 3455 aa7.65□□□□□ -1.18
Smarca5-201ENSMUST00000043359 Col7a1Q63870 2944 aa7.63□□□□□ -1.19
Smarca5-201ENSMUST00000043359 Zfhx4Q9JJN2 3550 aa7.61□□□□□ -1.19
Smarca5-201ENSMUST00000043359 Crct1Q6PAI5 102 aa7.59□□□□□ -1.2
Smarca5-201ENSMUST00000043359 Megf8P60882 2789 aa7.58□□□□□ -1.2
Smarca5-201ENSMUST00000043359 Vps13cQ8BX70 3748 aa7.57□□□□□ -1.2
Smarca5-201ENSMUST00000043359 VwfQ8CIZ8 2813 aa7.54□□□□□ -1.2
Smarca5-201ENSMUST00000043359 Prm2P07978 107 aa7.53□□□□□ -1.2
Smarca5-201ENSMUST00000043359 Ndufaf8A2AMZ4 74 aa7.5□□□□□ -1.21
Smarca5-201ENSMUST00000043359 Akap9Q70FJ1 3797 aa7.5□□□□□ -1.21
Smarca5-201ENSMUST00000043359 1700042G07RikB1AUF7 90 aa7.46□□□□□ -1.22
Smarca5-201ENSMUST00000043359 B930094E09RikQ8C4T2 136 aa7.36□□□□□ -1.23
Smarca5-201ENSMUST00000043359 Csmd2V9GX34 3611 aa7.35□□□□□ -1.23
Smarca5-201ENSMUST00000043359 Fbn1Q61554 2873 aaKnown RBP7.35□□□□□ -1.23
Smarca5-201ENSMUST00000043359 Muc6Q80T03 2850 aa7.34□□□□□ -1.23
Smarca5-201ENSMUST00000043359 Gm20537G3UYK7 97 aa7.29□□□□□ -1.24
Smarca5-201ENSMUST00000043359 4933428G20RikQ9D3X4 101 aa7.24□□□□□ -1.25
Smarca5-201ENSMUST00000043359 Gm40193A0A1B0GT39 78 aa7.22□□□□□ -1.25
Smarca5-201ENSMUST00000043359 Muc4Q8JZM8 3443 aa7.2□□□□□ -1.26
Smarca5-201ENSMUST00000043359 Gm9112A2AI92 75 aa7.2□□□□□ -1.26
Smarca5-201ENSMUST00000043359 LystP97412 3788 aa7.19□□□□□ -1.26
Smarca5-201ENSMUST00000043359 Krtap19-5O08632 62 aa7.17□□□□□ -1.26
Smarca5-201ENSMUST00000043359 Lama5Q61001 3718 aa7.13□□□□□ -1.27
Smarca5-201ENSMUST00000043359 Gm17416Q30KP4 66 aa7.13□□□□□ -1.27
Smarca5-201ENSMUST00000043359 2310079G19RikQ9D6L6 185 aa7.13□□□□□ -1.27
Smarca5-201ENSMUST00000043359 Smg1Q8BKX6 3658 aaKnown RBP7.12□□□□□ -1.27
Smarca5-201ENSMUST00000043359 SmcpP15265 143 aa7.09□□□□□ -1.27
Smarca5-201ENSMUST00000043359 Cmya5Q70KF4 3739 aa7.07□□□□□ -1.28
Smarca5-201ENSMUST00000043359 2210017I01RikA0A0A6YVV1 95 aa7.07□□□□□ -1.28
Smarca5-201ENSMUST00000043359 Gm18596A0A1W2P860 280 aa7.01□□□□□ -1.29
Smarca5-201ENSMUST00000043359 Gm6358A0A087WPH4 74 aa6.99□□□□□ -1.29
Smarca5-201ENSMUST00000043359 Gm19668J3QMD1 248 aa6.99□□□□□ -1.29
Smarca5-201ENSMUST00000043359 Csmd1Q923L3 3564 aa6.98□□□□□ -1.29
Smarca5-201ENSMUST00000043359 Sprr2kO70562 68 aa6.96□□□□□ -1.3
Smarca5-201ENSMUST00000043359 Krtap13-1Q8K198 168 aa6.94□□□□□ -1.3
Smarca5-201ENSMUST00000043359 Svep1A2AVA0 3567 aa6.8□□□□□ -1.32
Smarca5-201ENSMUST00000043359 Ank2Q8C8R3 3898 aa6.8□□□□□ -1.32
Smarca5-201ENSMUST00000043359 Gm11939A2A592 99 aa6.77□□□□□ -1.33
Smarca5-201ENSMUST00000043359 Gm17402F6Z0L5 76 aa6.73□□□□□ -1.33
Smarca5-201ENSMUST00000043359 BsnO88737 3942 aa6.7□□□□□ -1.34
Smarca5-201ENSMUST00000043359 Gm19402J3QJV4 266 aa6.7□□□□□ -1.34
Smarca5-201ENSMUST00000043359 CubnQ9JLB4 3623 aa6.7□□□□□ -1.34
Smarca5-201ENSMUST00000043359 LorP18165 486 aa6.69□□□□□ -1.34
Smarca5-201ENSMUST00000043359 Krtap8-1O08633 61 aa6.65□□□□□ -1.34
Smarca5-201ENSMUST00000043359 Ryr1E9PZQ0 5035 aa6.58□□□□□ -1.36
Smarca5-201ENSMUST00000043359 Sprr2gO70558 76 aa6.53□□□□□ -1.36
Smarca5-201ENSMUST00000043359 Xirp2Q4U4S6 3784 aa6.52□□□□□ -1.37
Smarca5-201ENSMUST00000043359 Krtap3-1A2A591 98 aa6.46□□□□□ -1.38
Smarca5-201ENSMUST00000043359 Hspg2Q05793 3707 aaKnown RBP6.45□□□□□ -1.38
Smarca5-201ENSMUST00000043359 Huwe1Q7TMY8 4377 aaKnown RBP6.37□□□□□ -1.39
Smarca5-201ENSMUST00000043359 Krtap7-1Q9D3I6 87 aa6.36□□□□□ -1.39
Smarca5-201ENSMUST00000043359 Krtap19-9aF8WH65 55 aa6.32□□□□□ -1.4
Smarca5-201ENSMUST00000043359 Dnah14A0A140LIJ4 4489 aa6.31□□□□□ -1.4
Smarca5-201ENSMUST00000043359 Lce1mQ9CR91 182 aa6.21□□□□□ -1.41
Smarca5-201ENSMUST00000043359 Krtap3-2Q9D638 99 aa6.21□□□□□ -1.42
Smarca5-201ENSMUST00000043359 Krtap3-3Q9D7P0 99 aa6.21□□□□□ -1.42
Smarca5-201ENSMUST00000043359 Kmt2aP55200 3966 aa6.2□□□□□ -1.42
Smarca5-201ENSMUST00000043359 Dnah10D3YYQ8 4591 aa6.17□□□□□ -1.42
Smarca5-201ENSMUST00000043359 Krtap1-4Q3V2D6 188 aa6.13□□□□□ -1.43
Smarca5-201ENSMUST00000043359 Krtap1-5A2A590 122 aa6.12□□□□□ -1.43
Smarca5-201ENSMUST00000043359 Dnah6E9Q0B6 4144 aa6.12□□□□□ -1.43
Smarca5-201ENSMUST00000043359 Csmd3Q80T79 3707 aa6.11□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 64.1 ms