RNA–Protein interactions for RNA: ENSMUST00000038421.7

Lsm1-201, Transcript of U6 snRNA-associated Sm-like protein LSm1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm1, Length 2,663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1-201ENSMUST00000038421 Sec61gP60060 68 aa10□□□□□ -0.81
Lsm1-201ENSMUST00000038421 9230102O04RikA2ASX7 82 aa10□□□□□ -0.81
Lsm1-201ENSMUST00000038421 Cypt14J3QPF7 87 aa9.99□□□□□ -0.81
Lsm1-201ENSMUST00000038421 Gm16253D3Z167 63 aa9.98□□□□□ -0.81
Lsm1-201ENSMUST00000038421 Znf706Q9D115 76 aaKnown RBP9.96□□□□□ -0.81
Lsm1-201ENSMUST00000038421 Gm21798J3QNU5 87 aa9.95□□□□□ -0.82
Lsm1-201ENSMUST00000038421 Gm9507D3Z5T3 223 aa9.95□□□□□ -0.82
Lsm1-201ENSMUST00000038421 Ndufb1P0DN34 57 aa9.95□□□□□ -0.82
Lsm1-201ENSMUST00000038421 NbdyA0A0N4SUI7 68 aa9.93□□□□□ -0.82
Lsm1-201ENSMUST00000038421 1600014C23RikQ9DAX4 101 aa9.93□□□□□ -0.82
Lsm1-201ENSMUST00000038421 Gm3646F6S692 53 aa9.91□□□□□ -0.82
Lsm1-201ENSMUST00000038421 Defb13Q8R2I4 64 aa9.9□□□□□ -0.82
Lsm1-201ENSMUST00000038421 Defb39Q70KL3 74 aa9.89□□□□□ -0.83
Lsm1-201ENSMUST00000038421 PrkdcP97313 4128 aa9.88□□□□□ -0.83
Lsm1-201ENSMUST00000038421 Fras1Q80T14 4010 aa9.87□□□□□ -0.83
Lsm1-201ENSMUST00000038421 Gm4707V9GXN5 68 aa9.87□□□□□ -0.83
Lsm1-201ENSMUST00000038421 Dnah5Q8VHE6 4621 aa9.86□□□□□ -0.83
Lsm1-201ENSMUST00000038421 Gm10643Q3URG9 111 aa9.85□□□□□ -0.83
Lsm1-201ENSMUST00000038421 1700042G07RikB1AUF7 90 aa9.84□□□□□ -0.83
Lsm1-201ENSMUST00000038421 Gm26620Q9CY65 116 aa9.84□□□□□ -0.83
Lsm1-201ENSMUST00000038421 Krtap14O08640 167 aa9.81□□□□□ -0.84
Lsm1-201ENSMUST00000038421 TnxbO35452 4006 aa9.81□□□□□ -0.84
Lsm1-201ENSMUST00000038421 Ccdc179J3QM76 67 aa9.81□□□□□ -0.84
Lsm1-201ENSMUST00000038421 Cypt15B1AXS0 87 aa9.8□□□□□ -0.84
Lsm1-201ENSMUST00000038421 PlecQ9QXS1 4691 aaKnown RBP9.8□□□□□ -0.84
Lsm1-201ENSMUST00000038421 Tnp2P11378 117 aa9.8□□□□□ -0.84
Lsm1-201ENSMUST00000038421 Dnah7cA0A087WR13 4024 aa9.79□□□□□ -0.84
Lsm1-201ENSMUST00000038421 Gm9918Q8BUR5 174 aa9.79□□□□□ -0.84
Lsm1-201ENSMUST00000038421 Limd2Q8BGB5 128 aa9.78□□□□□ -0.84
Lsm1-201ENSMUST00000038421 Uqcr11Q9CPX8 56 aa9.78□□□□□ -0.84
Lsm1-201ENSMUST00000038421 Wfdc3Q14AE4 130 aa9.77□□□□□ -0.85
Lsm1-201ENSMUST00000038421 Spaca4Q80ZQ0 127 aa9.77□□□□□ -0.85
Lsm1-201ENSMUST00000038421 Gpr15lA0A0B4J1N3 78 aa9.76□□□□□ -0.85
Lsm1-201ENSMUST00000038421 Gm10999F6Q4M4 69 aa9.73□□□□□ -0.85
Lsm1-201ENSMUST00000038421 2310050C09RikG5E8Z3 280 aa9.71□□□□□ -0.86
Lsm1-201ENSMUST00000038421 Krtap13O88375 197 aa9.7□□□□□ -0.86
Lsm1-201ENSMUST00000038421 Ndufs5Q99LY9 106 aa9.7□□□□□ -0.86
Lsm1-201ENSMUST00000038421 Hectd4E9Q2E4 4418 aa9.7□□□□□ -0.86
Lsm1-201ENSMUST00000038421 Krtap10-4Q08EG8 221 aa9.69□□□□□ -0.86
Lsm1-201ENSMUST00000038421 Dnah7aE9Q0T8 4024 aa9.65□□□□□ -0.86
Lsm1-201ENSMUST00000038421 Ly6g6cQ9Z1Q4 126 aa9.63□□□□□ -0.87
Lsm1-201ENSMUST00000038421 Stard9Q80TF6 4561 aa9.62□□□□□ -0.87
Lsm1-201ENSMUST00000038421 Q8BGJ3 129 aa9.62□□□□□ -0.87
Lsm1-201ENSMUST00000038421 Defb1P56386 69 aa9.61□□□□□ -0.87
Lsm1-201ENSMUST00000038421 2310034C09RikQ9D746 214 aa9.61□□□□□ -0.87
Lsm1-201ENSMUST00000038421 Vps13dB1ART2 4390 aa9.57□□□□□ -0.88
Lsm1-201ENSMUST00000038421 Dnah2P0C6F1 4456 aa9.53□□□□□ -0.88
Lsm1-201ENSMUST00000038421 FcgbpE9Q0B5 2583 aa9.53□□□□□ -0.88
Lsm1-201ENSMUST00000038421 2310079G19RikQ9D6L6 185 aa9.51□□□□□ -0.89
Lsm1-201ENSMUST00000038421 Pkd1O08852 4293 aa9.49□□□□□ -0.89
Lsm1-201ENSMUST00000038421 Lrp1bQ9JI18 4599 aa9.48□□□□□ -0.89
Lsm1-201ENSMUST00000038421 Gm9821Q8K076 103 aa9.45□□□□□ -0.9
Lsm1-201ENSMUST00000038421 Krtap10-10A0A1W2P7T6 217 aa9.41□□□□□ -0.9
Lsm1-201ENSMUST00000038421 Krtap3-2Q9D638 99 aa9.41□□□□□ -0.9
Lsm1-201ENSMUST00000038421 Krtap3-3Q9D7P0 99 aa9.41□□□□□ -0.9
Lsm1-201ENSMUST00000038421 ApobE9Q414 4505 aa9.38□□□□□ -0.91
Lsm1-201ENSMUST00000038421 4930507D05RikQ8C9C9 103 aa9.36□□□□□ -0.91
Lsm1-201ENSMUST00000038421 OxtP35454 125 aa9.35□□□□□ -0.91
Lsm1-201ENSMUST00000038421 Defb11Q8R2I7 77 aa9.35□□□□□ -0.91
Lsm1-201ENSMUST00000038421 A930033H14RikG5E8X6 103 aa9.32□□□□□ -0.92
Lsm1-201ENSMUST00000038421 Pkhd1E9PZ36 4059 aa9.32□□□□□ -0.92
Lsm1-201ENSMUST00000038421 Gm2696A0A1W2P709 240 aa9.31□□□□□ -0.92
Lsm1-201ENSMUST00000038421 D6Ertd527eA0A0N4SWI3 464 aa9.3□□□□□ -0.92
Lsm1-201ENSMUST00000038421 Gm4491E0CX42 125 aa9.28□□□□□ -0.92
Lsm1-201ENSMUST00000038421 Pla2g10Q9QXX3 151 aa9.18□□□□□ -0.94
Lsm1-201ENSMUST00000038421 RetnlbQ99P86 105 aa9.13□□□□□ -0.95
Lsm1-201ENSMUST00000038421 Gm11939A2A592 99 aa9.11□□□□□ -0.95
Lsm1-201ENSMUST00000038421 SacsQ9JLC8 4582 aa9.11□□□□□ -0.95
Lsm1-201ENSMUST00000038421 Fat2Q5F226 4351 aa9.1□□□□□ -0.95
Lsm1-201ENSMUST00000038421 Gm20537G3UYK7 97 aa9.06□□□□□ -0.96
Lsm1-201ENSMUST00000038421 Gm3880A0A1B0GSB3 72 aa9.04□□□□□ -0.96
Lsm1-201ENSMUST00000038421 Fat1A0A1L1SQU7 4645 aa9.03□□□□□ -0.96
Lsm1-201ENSMUST00000038421 Rps29P62274 56 aa9.03□□□□□ -0.96
Lsm1-201ENSMUST00000038421 Cox6b2Q80ZN9 88 aa9.01□□□□□ -0.97
Lsm1-201ENSMUST00000038421 Gm12216A0A1W2P827 62 aa8.96□□□□□ -0.97
Lsm1-201ENSMUST00000038421 Vps13bQ80TY5 3993 aa8.93□□□□□ -0.98
Lsm1-201ENSMUST00000038421 Dync1h1Q9JHU4 4644 aaKnown RBP8.87□□□□□ -0.99
Lsm1-201ENSMUST00000038421 Pkhd1l1Q80ZA4 4249 aa8.86□□□□□ -0.99
Lsm1-201ENSMUST00000038421 Lrp1Q91ZX7 4545 aaKnown RBP8.84□□□□□ -0.99
Lsm1-201ENSMUST00000038421 Gm5767A0A0J9YTU8 78 aa8.8□□□□□ -1
Lsm1-201ENSMUST00000038421 CriptO70333 101 aa8.78□□□□□ -1
Lsm1-201ENSMUST00000038421 Gm10382Q3V0T5 144 aa8.77□□□□□ -1
Lsm1-201ENSMUST00000038421 Ryr3A2AGL3 4863 aa8.77□□□□□ -1.01
Lsm1-201ENSMUST00000038421 Gm9955Q8CEJ8 102 aa8.76□□□□□ -1.01
Lsm1-201ENSMUST00000038421 Gm17606F6ZL36 78 aa8.7□□□□□ -1.02
Lsm1-201ENSMUST00000038421 Rnase13Q5GAM7 153 aa8.66□□□□□ -1.02
Lsm1-201ENSMUST00000038421 Gm9736A0A1W2P7N1 277 aa8.65□□□□□ -1.03
Lsm1-201ENSMUST00000038421 Krtap15-1Q9QZU5 150 aa8.62□□□□□ -1.03
Lsm1-201ENSMUST00000038421 Gm5965D3Z724 196 aa8.58□□□□□ -1.04
Lsm1-201ENSMUST00000038421 Romo1P60603 79 aa8.57□□□□□ -1.04
Lsm1-201ENSMUST00000038421 Rpl37Q9D823 97 aa8.57□□□□□ -1.04
Lsm1-201ENSMUST00000038421 Mycbp2Q7TPH6 4711 aa8.56□□□□□ -1.04
Lsm1-201ENSMUST00000038421 Krtap19-5O08632 62 aa8.54□□□□□ -1.04
Lsm1-201ENSMUST00000038421 Fat3Q8BNA6 4555 aa8.53□□□□□ -1.04
Lsm1-201ENSMUST00000038421 Kmt2cQ8BRH4 4903 aa8.52□□□□□ -1.05
Lsm1-201ENSMUST00000038421 Mp68P56379 58 aa8.46□□□□□ -1.06
Lsm1-201ENSMUST00000038421 Krtap3-1A2A591 98 aa8.45□□□□□ -1.06
Lsm1-201ENSMUST00000038421 Gm20538F6Z9R1 75 aa8.4□□□□□ -1.06
Lsm1-201ENSMUST00000038421 Gm17416Q30KP4 66 aa8.38□□□□□ -1.07
Lsm1-201ENSMUST00000038421 Abca13Q5SSE9 5034 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 395.2 ms