RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Gm10160F6Y577 67 aa9.9□□□□□ -0.82
Trim8-201ENSMUST00000026008 Igkv3-3A0A140T8Q0 119 aa9.9□□□□□ -0.83
Trim8-201ENSMUST00000026008 1600014C23RikQ9DAX4 101 aa9.9□□□□□ -0.83
Trim8-201ENSMUST00000026008 Gm10065F6TJM2 114 aa9.86□□□□□ -0.83
Trim8-201ENSMUST00000026008 OxtP35454 125 aa9.84□□□□□ -0.83
Trim8-201ENSMUST00000026008 Dync2h1Q45VK7 4306 aa9.84□□□□□ -0.83
Trim8-201ENSMUST00000026008 Krtap10-4Q08EG8 221 aa9.84□□□□□ -0.83
Trim8-201ENSMUST00000026008 PlecQ9QXS1 4691 aaKnown RBP9.83□□□□□ -0.84
Trim8-201ENSMUST00000026008 Krtap29-1A2A5X4 342 aa9.82□□□□□ -0.84
Trim8-201ENSMUST00000026008 Dnah5Q8VHE6 4621 aa9.81□□□□□ -0.84
Trim8-201ENSMUST00000026008 4933415A04RikQ9D443 101 aa9.8□□□□□ -0.84
Trim8-201ENSMUST00000026008 Gm9918Q8BUR5 174 aa9.79□□□□□ -0.84
Trim8-201ENSMUST00000026008 Ly6g6cQ9Z1Q4 126 aa9.77□□□□□ -0.84
Trim8-201ENSMUST00000026008 Gm20661K7N787 53 aa9.77□□□□□ -0.85
Trim8-201ENSMUST00000026008 Cypt14J3QPF7 87 aa9.76□□□□□ -0.85
Trim8-201ENSMUST00000026008 NbdyA0A0N4SUI7 68 aa9.75□□□□□ -0.85
Trim8-201ENSMUST00000026008 Znf706Q9D115 76 aaKnown RBP9.75□□□□□ -0.85
Trim8-201ENSMUST00000026008 Sox16Q62247 57 aa9.75□□□□□ -0.85
Trim8-201ENSMUST00000026008 SptssbQ925E8 76 aa9.74□□□□□ -0.85
Trim8-201ENSMUST00000026008 Defb13Q8R2I4 64 aa9.73□□□□□ -0.85
Trim8-201ENSMUST00000026008 Gm16253D3Z167 63 aa9.72□□□□□ -0.85
Trim8-201ENSMUST00000026008 Defb39Q70KL3 74 aa9.72□□□□□ -0.85
Trim8-201ENSMUST00000026008 Dnah7cA0A087WR13 4024 aa9.71□□□□□ -0.85
Trim8-201ENSMUST00000026008 2310050C09RikG5E8Z3 280 aa9.7□□□□□ -0.86
Trim8-201ENSMUST00000026008 Wfdc3Q14AE4 130 aa9.69□□□□□ -0.86
Trim8-201ENSMUST00000026008 Krtap14O08640 167 aa9.67□□□□□ -0.86
Trim8-201ENSMUST00000026008 Defb11Q8R2I7 77 aa9.67□□□□□ -0.86
Trim8-201ENSMUST00000026008 Gm21798J3QNU5 87 aa9.67□□□□□ -0.86
Trim8-201ENSMUST00000026008 Spaca4Q80ZQ0 127 aa9.66□□□□□ -0.86
Trim8-201ENSMUST00000026008 1700042G07RikB1AUF7 90 aa9.65□□□□□ -0.86
Trim8-201ENSMUST00000026008 Krtap13O88375 197 aa9.62□□□□□ -0.87
Trim8-201ENSMUST00000026008 Dnah7aE9Q0T8 4024 aa9.62□□□□□ -0.87
Trim8-201ENSMUST00000026008 Gpr15lA0A0B4J1N3 78 aa9.6□□□□□ -0.87
Trim8-201ENSMUST00000026008 Tnp2P11378 117 aa9.6□□□□□ -0.87
Trim8-201ENSMUST00000026008 Cypt15B1AXS0 87 aa9.6□□□□□ -0.87
Trim8-201ENSMUST00000026008 Krtap10-10A0A1W2P7T6 217 aa9.58□□□□□ -0.88
Trim8-201ENSMUST00000026008 Ndufb1P0DN34 57 aa9.55□□□□□ -0.88
Trim8-201ENSMUST00000026008 Gm26620Q9CY65 116 aa9.54□□□□□ -0.88
Trim8-201ENSMUST00000026008 Gm10999F6Q4M4 69 aa9.52□□□□□ -0.88
Trim8-201ENSMUST00000026008 Stard9Q80TF6 4561 aa9.52□□□□□ -0.89
Trim8-201ENSMUST00000026008 Gm2696A0A1W2P709 240 aa9.48□□□□□ -0.89
Trim8-201ENSMUST00000026008 Hectd4E9Q2E4 4418 aa9.47□□□□□ -0.89
Trim8-201ENSMUST00000026008 Gm3646F6S692 53 aa9.47□□□□□ -0.89
Trim8-201ENSMUST00000026008 Gm10643Q3URG9 111 aa9.44□□□□□ -0.9
Trim8-201ENSMUST00000026008 Defb1P56386 69 aa9.43□□□□□ -0.9
Trim8-201ENSMUST00000026008 Ndufs5Q99LY9 106 aa9.43□□□□□ -0.9
Trim8-201ENSMUST00000026008 Q8BGJ3 129 aa9.42□□□□□ -0.9
Trim8-201ENSMUST00000026008 Vps13dB1ART2 4390 aa9.41□□□□□ -0.9
Trim8-201ENSMUST00000026008 Lrp1bQ9JI18 4599 aa9.4□□□□□ -0.9
Trim8-201ENSMUST00000026008 Limd2Q8BGB5 128 aa9.39□□□□□ -0.91
Trim8-201ENSMUST00000026008 Uqcr11Q9CPX8 56 aa9.38□□□□□ -0.91
Trim8-201ENSMUST00000026008 Pkd1O08852 4293 aa9.37□□□□□ -0.91
Trim8-201ENSMUST00000026008 2310034C09RikQ9D746 214 aa9.36□□□□□ -0.91
Trim8-201ENSMUST00000026008 Dnah2P0C6F1 4456 aa9.35□□□□□ -0.91
Trim8-201ENSMUST00000026008 Gm9821Q8K076 103 aa9.3□□□□□ -0.92
Trim8-201ENSMUST00000026008 ApobE9Q414 4505 aa9.21□□□□□ -0.93
Trim8-201ENSMUST00000026008 Ryr3A2AGL3 4863 aa9.21□□□□□ -0.94
Trim8-201ENSMUST00000026008 Gm21887J3QQ04 176 aa9.2□□□□□ -0.94
Trim8-201ENSMUST00000026008 2310079G19RikQ9D6L6 185 aa9.18□□□□□ -0.94
Trim8-201ENSMUST00000026008 RetnlbQ99P86 105 aa9.16□□□□□ -0.94
Trim8-201ENSMUST00000026008 Pkhd1E9PZ36 4059 aa9.14□□□□□ -0.95
Trim8-201ENSMUST00000026008 Krtap3-2Q9D638 99 aa9.12□□□□□ -0.95
Trim8-201ENSMUST00000026008 Krtap3-3Q9D7P0 99 aa9.12□□□□□ -0.95
Trim8-201ENSMUST00000026008 4930507D05RikQ8C9C9 103 aa9.1□□□□□ -0.95
Trim8-201ENSMUST00000026008 Gm4491E0CX42 125 aa9.09□□□□□ -0.96
Trim8-201ENSMUST00000026008 Fat1A0A1L1SQU7 4645 aa9.08□□□□□ -0.96
Trim8-201ENSMUST00000026008 Gm12216A0A1W2P827 62 aa9.08□□□□□ -0.96
Trim8-201ENSMUST00000026008 Gm11939A2A592 99 aa9.06□□□□□ -0.96
Trim8-201ENSMUST00000026008 D6Ertd527eA0A0N4SWI3 464 aa9.03□□□□□ -0.96
Trim8-201ENSMUST00000026008 A930033H14RikG5E8X6 103 aa9□□□□□ -0.97
Trim8-201ENSMUST00000026008 Dync1h1Q9JHU4 4644 aaKnown RBP8.99□□□□□ -0.97
Trim8-201ENSMUST00000026008 SacsQ9JLC8 4582 aa8.97□□□□□ -0.97
Trim8-201ENSMUST00000026008 Fat2Q5F226 4351 aa8.96□□□□□ -0.97
Trim8-201ENSMUST00000026008 Lrp1Q91ZX7 4545 aaKnown RBP8.93□□□□□ -0.98
Trim8-201ENSMUST00000026008 Vps13bQ80TY5 3993 aa8.87□□□□□ -0.99
Trim8-201ENSMUST00000026008 Gm20538F6Z9R1 75 aa8.8□□□□□ -1
Trim8-201ENSMUST00000026008 Rps29P62274 56 aa8.79□□□□□ -1
Trim8-201ENSMUST00000026008 Gm3880A0A1B0GSB3 72 aa8.78□□□□□ -1
Trim8-201ENSMUST00000026008 Mp68P56379 58 aa8.78□□□□□ -1
Trim8-201ENSMUST00000026008 Pkhd1l1Q80ZA4 4249 aa8.77□□□□□ -1.01
Trim8-201ENSMUST00000026008 Gm20537G3UYK7 97 aa8.74□□□□□ -1.01
Trim8-201ENSMUST00000026008 CriptO70333 101 aa8.74□□□□□ -1.01
Trim8-201ENSMUST00000026008 Cox6b2Q80ZN9 88 aa8.74□□□□□ -1.01
Trim8-201ENSMUST00000026008 Pla2g10Q9QXX3 151 aa8.71□□□□□ -1.01
Trim8-201ENSMUST00000026008 Ryr2E9Q401 4966 aaKnown RBP8.7□□□□□ -1.02
Trim8-201ENSMUST00000026008 Kmt2cQ8BRH4 4903 aa8.69□□□□□ -1.02
Trim8-201ENSMUST00000026008 Gm9736A0A1W2P7N1 277 aa8.67□□□□□ -1.02
Trim8-201ENSMUST00000026008 Gm5767A0A0J9YTU8 78 aa8.66□□□□□ -1.02
Trim8-201ENSMUST00000026008 Prm2P07978 107 aa8.65□□□□□ -1.02
Trim8-201ENSMUST00000026008 Abca13Q5SSE9 5034 aa8.64□□□□□ -1.03
Trim8-201ENSMUST00000026008 Mycbp2Q7TPH6 4711 aa8.63□□□□□ -1.03
Trim8-201ENSMUST00000026008 Ryr1E9PZQ0 5035 aa8.62□□□□□ -1.03
Trim8-201ENSMUST00000026008 Gm10382Q3V0T5 144 aa8.58□□□□□ -1.04
Trim8-201ENSMUST00000026008 Krtap15-1Q9QZU5 150 aa8.58□□□□□ -1.04
Trim8-201ENSMUST00000026008 Krtap19-5O08632 62 aa8.56□□□□□ -1.04
Trim8-201ENSMUST00000026008 Gm5965D3Z724 196 aa8.54□□□□□ -1.04
Trim8-201ENSMUST00000026008 Fat3Q8BNA6 4555 aa8.53□□□□□ -1.04
Trim8-201ENSMUST00000026008 Rnase13Q5GAM7 153 aa8.53□□□□□ -1.04
Trim8-201ENSMUST00000026008 Gm17606F6ZL36 78 aa8.52□□□□□ -1.04
Trim8-201ENSMUST00000026008 Romo1P60603 79 aa8.48□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 73.9 ms