RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Gm10065F6TJM2 114 aa6.77□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Gm28230A0A0A0MQ91 144 aa6.76□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Chtf8P0CG14 533 aa6.76□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Dnah11E9Q7N9 4488 aa6.76□□□□□ -1.33
Ldb3-202ENSMUST00000022328 6030445D17RikE9Q8F9 148 aa6.75□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Q8K1L6 76 aa6.75□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Plac8Q9JI48 112 aa6.75□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Pkd1l1Q8R526 2615 aa6.75□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Igkv3-7A0A0G2JE31 119 aa6.74□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Gm27235Q3UW50 83 aa6.73□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Fras1Q80T14 4010 aa6.73□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Igkv3-3A0A140T8Q0 119 aa6.73□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Krtap29-1A2A5X4 342 aa6.73□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Dnah9B1AR51 4484 aa6.72□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Rpl37aP61514 92 aa6.72□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Gm9507D3Z5T3 223 aa6.72□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Gm3646F6S692 53 aa6.72□□□□□ -1.33
Ldb3-202ENSMUST00000022328 Gm9918Q8BUR5 174 aa6.72□□□□□ -1.33
Ldb3-202ENSMUST00000022328 HrnrQ8VHD8 2496 aa6.71□□□□□ -1.34
Ldb3-202ENSMUST00000022328 Igkv3-5A0A140T8M6 119 aa6.7□□□□□ -1.34
Ldb3-202ENSMUST00000022328 PlecQ9QXS1 4691 aaKnown RBP6.7□□□□□ -1.34
Ldb3-202ENSMUST00000022328 PrkdcP97313 4128 aa6.69□□□□□ -1.34
Ldb3-202ENSMUST00000022328 Krtap10-4Q08EG8 221 aa6.69□□□□□ -1.34
Ldb3-202ENSMUST00000022328 Gm10642Q3TWM1 71 aa6.68□□□□□ -1.34
Ldb3-202ENSMUST00000022328 SptssbQ925E8 76 aa6.68□□□□□ -1.34
Ldb3-202ENSMUST00000022328 FasnP19096 2504 aaKnown RBP6.67□□□□□ -1.34
Ldb3-202ENSMUST00000022328 Gm2310J3QNJ2 377 aa6.67□□□□□ -1.34
Ldb3-202ENSMUST00000022328 Defb11Q8R2I7 77 aa6.66□□□□□ -1.34
Ldb3-202ENSMUST00000022328 Gm10267M0QWD8 85 aa6.66□□□□□ -1.34
Ldb3-202ENSMUST00000022328 Gm20661K7N787 53 aa6.65□□□□□ -1.35
Ldb3-202ENSMUST00000022328 NbdyA0A0N4SUI7 68 aa6.64□□□□□ -1.35
Ldb3-202ENSMUST00000022328 Ndufb1P0DN34 57 aa6.62□□□□□ -1.35
Ldb3-202ENSMUST00000022328 Krtap31-1Q9D644 177 aa6.62□□□□□ -1.35
Ldb3-202ENSMUST00000022328 2310050C09RikG5E8Z3 280 aa6.62□□□□□ -1.35
Ldb3-202ENSMUST00000022328 Adm2Q7TNK8 150 aa6.61□□□□□ -1.35
Ldb3-202ENSMUST00000022328 Lce1jD3YUU5 139 aa6.6□□□□□ -1.35
Ldb3-202ENSMUST00000022328 Znf706Q9D115 76 aaKnown RBP6.6□□□□□ -1.35
Ldb3-202ENSMUST00000022328 Gpr15lA0A0B4J1N3 78 aa6.59□□□□□ -1.35
Ldb3-202ENSMUST00000022328 Cypt14J3QPF7 87 aa6.59□□□□□ -1.35
Ldb3-202ENSMUST00000022328 Ly6g6cQ9Z1Q4 126 aa6.58□□□□□ -1.36
Ldb3-202ENSMUST00000022328 Tnp2P11378 117 aa6.58□□□□□ -1.36
Ldb3-202ENSMUST00000022328 Defb38Q7TNV7 63 aa6.57□□□□□ -1.36
Ldb3-202ENSMUST00000022328 1600014C23RikQ9DAX4 101 aa6.57□□□□□ -1.36
Ldb3-202ENSMUST00000022328 FcgbpE9Q0B5 2583 aa6.56□□□□□ -1.36
Ldb3-202ENSMUST00000022328 Defb39Q70KL3 74 aa6.56□□□□□ -1.36
Ldb3-202ENSMUST00000022328 Krtap14O08640 167 aa6.53□□□□□ -1.36
Ldb3-202ENSMUST00000022328 Anapc11Q9CPX9 84 aa6.53□□□□□ -1.36
Ldb3-202ENSMUST00000022328 Dnah7cA0A087WR13 4024 aa6.53□□□□□ -1.36
Ldb3-202ENSMUST00000022328 Gm16253D3Z167 63 aa6.53□□□□□ -1.36
Ldb3-202ENSMUST00000022328 Limd2Q8BGB5 128 aa6.51□□□□□ -1.37
Ldb3-202ENSMUST00000022328 Dnah7aE9Q0T8 4024 aa6.48□□□□□ -1.37
Ldb3-202ENSMUST00000022328 Gm9821Q8K076 103 aa6.48□□□□□ -1.37
Ldb3-202ENSMUST00000022328 Uqcr11Q9CPX8 56 aa6.47□□□□□ -1.37
Ldb3-202ENSMUST00000022328 Dnah5Q8VHE6 4621 aa6.47□□□□□ -1.37
Ldb3-202ENSMUST00000022328 Ndufs5Q99LY9 106 aa6.45□□□□□ -1.38
Ldb3-202ENSMUST00000022328 Sec61bQ9CQS8 96 aaKnown RBP6.44□□□□□ -1.38
Ldb3-202ENSMUST00000022328 Gm21798J3QNU5 87 aa6.42□□□□□ -1.38
Ldb3-202ENSMUST00000022328 Vps13dB1ART2 4390 aa6.42□□□□□ -1.38
Ldb3-202ENSMUST00000022328 Dnah2P0C6F1 4456 aa6.41□□□□□ -1.38
Ldb3-202ENSMUST00000022328 Lce1hQ9D6R3 140 aa6.41□□□□□ -1.38
Ldb3-202ENSMUST00000022328 Hectd4E9Q2E4 4418 aa6.4□□□□□ -1.39
Ldb3-202ENSMUST00000022328 Krtap13O88375 197 aa6.39□□□□□ -1.39
Ldb3-202ENSMUST00000022328 Pkd1O08852 4293 aa6.36□□□□□ -1.39
Ldb3-202ENSMUST00000022328 ApobE9Q414 4505 aa6.36□□□□□ -1.39
Ldb3-202ENSMUST00000022328 Cypt15B1AXS0 87 aa6.35□□□□□ -1.39
Ldb3-202ENSMUST00000022328 2310034C09RikQ9D746 214 aa6.35□□□□□ -1.39
Ldb3-202ENSMUST00000022328 Spaca4Q80ZQ0 127 aa6.34□□□□□ -1.39
Ldb3-202ENSMUST00000022328 Gm19668J3QMD1 248 aa6.33□□□□□ -1.4
Ldb3-202ENSMUST00000022328 Defb13Q8R2I4 64 aa6.32□□□□□ -1.4
Ldb3-202ENSMUST00000022328 Q8BGJ3 129 aa6.31□□□□□ -1.4
Ldb3-202ENSMUST00000022328 Stard9Q80TF6 4561 aa6.3□□□□□ -1.4
Ldb3-202ENSMUST00000022328 Lrp1bQ9JI18 4599 aa6.3□□□□□ -1.4
Ldb3-202ENSMUST00000022328 Gm2696A0A1W2P709 240 aa6.28□□□□□ -1.4
Ldb3-202ENSMUST00000022328 Lce1bQ9D149 137 aa6.28□□□□□ -1.4
Ldb3-202ENSMUST00000022328 Krtap15-1Q9QZU5 150 aa6.24□□□□□ -1.41
Ldb3-202ENSMUST00000022328 Gm12216A0A1W2P827 62 aa6.23□□□□□ -1.41
Ldb3-202ENSMUST00000022328 Pla2g10Q9QXX3 151 aa6.23□□□□□ -1.41
Ldb3-202ENSMUST00000022328 Wfdc3Q14AE4 130 aa6.21□□□□□ -1.41
Ldb3-202ENSMUST00000022328 Pkhd1E9PZ36 4059 aa6.21□□□□□ -1.42
Ldb3-202ENSMUST00000022328 Gm10999F6Q4M4 69 aa6.19□□□□□ -1.42
Ldb3-202ENSMUST00000022328 Gm38119A0A0A6YX29 146 aa6.18□□□□□ -1.42
Ldb3-202ENSMUST00000022328 Dync1h1Q9JHU4 4644 aaKnown RBP6.17□□□□□ -1.42
Ldb3-202ENSMUST00000022328 A0A1Y7VJH8 109 aa6.17□□□□□ -1.42
Ldb3-202ENSMUST00000022328 Fat1A0A1L1SQU7 4645 aa6.16□□□□□ -1.42
Ldb3-202ENSMUST00000022328 Fat2Q5F226 4351 aa6.15□□□□□ -1.42
Ldb3-202ENSMUST00000022328 SacsQ9JLC8 4582 aa6.13□□□□□ -1.43
Ldb3-202ENSMUST00000022328 Defb1P56386 69 aa6.13□□□□□ -1.43
Ldb3-202ENSMUST00000022328 Rps29P62274 56 aa6.13□□□□□ -1.43
Ldb3-202ENSMUST00000022328 2310079G19RikQ9D6L6 185 aa6.13□□□□□ -1.43
Ldb3-202ENSMUST00000022328 Gm20538F6Z9R1 75 aa6.09□□□□□ -1.43
Ldb3-202ENSMUST00000022328 RetnlbQ99P86 105 aa6.09□□□□□ -1.43
Ldb3-202ENSMUST00000022328 A930033H14RikG5E8X6 103 aa6.06□□□□□ -1.44
Ldb3-202ENSMUST00000022328 Ryr3A2AGL3 4863 aa6.03□□□□□ -1.44
Ldb3-202ENSMUST00000022328 4930507D05RikQ8C9C9 103 aa6□□□□□ -1.45
Ldb3-202ENSMUST00000022328 Gm4491E0CX42 125 aa5.98□□□□□ -1.45
Ldb3-202ENSMUST00000022328 Prm2P07978 107 aa5.98□□□□□ -1.45
Ldb3-202ENSMUST00000022328 D6Ertd527eA0A0N4SWI3 464 aa5.97□□□□□ -1.45
Ldb3-202ENSMUST00000022328 Mp68P56379 58 aa5.97□□□□□ -1.45
Ldb3-202ENSMUST00000022328 Pkhd1l1Q80ZA4 4249 aa5.96□□□□□ -1.46
Ldb3-202ENSMUST00000022328 LorP18165 486 aa5.94□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 80.4 ms