RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Gm3646F6S692 53 aa12,56□□□□□ -0,4
Trim47-201ENSMUST00000021120 Chchd10Q7TNL9 138 aa12,56□□□□□ -0,4
Trim47-201ENSMUST00000021120 Gm10139O88245 57 aa12,54□□□□□ -0,4
Trim47-201ENSMUST00000021120 Dnah2P0C6F1 4456 aa12,54□□□□□ -0,4
Trim47-201ENSMUST00000021120 1600014C23RikQ9DAX4 101 aa12,53□□□□□ -0,4
Trim47-201ENSMUST00000021120 Gm2696A0A1W2P709 240 aa12,52□□□□□ -0,41
Trim47-201ENSMUST00000021120 Gm28230A0A0A0MQ91 144 aa12,52□□□□□ -0,41
Trim47-201ENSMUST00000021120 1700074P13RikQ9D9G7 251 aa12,52□□□□□ -0,41
Trim47-201ENSMUST00000021120 Defb9Q8R2I6 67 aa12,51□□□□□ -0,41
Trim47-201ENSMUST00000021120 Pkd1O08852 4293 aa12,49□□□□□ -0,41
Trim47-201ENSMUST00000021120 Ryr3A2AGL3 4863 aa12,48□□□□□ -0,41
Trim47-201ENSMUST00000021120 Dnah5Q8VHE6 4621 aa12,48□□□□□ -0,41
Trim47-201ENSMUST00000021120 Gm2310J3QNJ2 377 aa12,46□□□□□ -0,41
Trim47-201ENSMUST00000021120 Gpr15lA0A0B4J1N3 78 aa12,46□□□□□ -0,42
Trim47-201ENSMUST00000021120 Gm20604F8WIA3 75 aa12,46□□□□□ -0,42
Trim47-201ENSMUST00000021120 Krtap13O88375 197 aa12,45□□□□□ -0,42
Trim47-201ENSMUST00000021120 Wfdc13Q5DQQ6 81 aa12,45□□□□□ -0,42
Trim47-201ENSMUST00000021120 Rpl37aP61514 92 aa12,44□□□□□ -0,42
Trim47-201ENSMUST00000021120 Wfdc10Q3V2J9 124 aa12,41□□□□□ -0,42
Trim47-201ENSMUST00000021120 Chtf8P0CG14 533 aa12,39□□□□□ -0,43
Trim47-201ENSMUST00000021120 Ryr2E9Q401 4966 aaKnown RBP12,38□□□□□ -0,43
Trim47-201ENSMUST00000021120 Adm2Q7TNK8 150 aa12,38□□□□□ -0,43
Trim47-201ENSMUST00000021120 SptssbQ925E8 76 aa12,38□□□□□ -0,43
Trim47-201ENSMUST00000021120 6030445D17RikE9Q8F9 148 aa12,36□□□□□ -0,43
Trim47-201ENSMUST00000021120 Igkv3-7A0A0G2JE31 119 aa12,34□□□□□ -0,43
Trim47-201ENSMUST00000021120 NbdyA0A0N4SUI7 68 aa12,34□□□□□ -0,43
Trim47-201ENSMUST00000021120 Stard9Q80TF6 4561 aa12,33□□□□□ -0,44
Trim47-201ENSMUST00000021120 Ndufb1P0DN34 57 aa12,31□□□□□ -0,44
Trim47-201ENSMUST00000021120 Q8K1L6 76 aa12,3□□□□□ -0,44
Trim47-201ENSMUST00000021120 Dync1h1Q9JHU4 4644 aaKnown RBP12,3□□□□□ -0,44
Trim47-201ENSMUST00000021120 Gm10642Q3TWM1 71 aa12,26□□□□□ -0,45
Trim47-201ENSMUST00000021120 HrnrQ8VHD8 2496 aa12,25□□□□□ -0,45
Trim47-201ENSMUST00000021120 Pkhd1E9PZ36 4059 aa12,25□□□□□ -0,45
Trim47-201ENSMUST00000021120 Fat1A0A1L1SQU7 4645 aa12,24□□□□□ -0,45
Trim47-201ENSMUST00000021120 Tnp2P11378 117 aa12,24□□□□□ -0,45
Trim47-201ENSMUST00000021120 Gm10267M0QWD8 85 aa12,23□□□□□ -0,45
Trim47-201ENSMUST00000021120 Gm27235Q3UW50 83 aa12,23□□□□□ -0,45
Trim47-201ENSMUST00000021120 Krtap14O08640 167 aa12,23□□□□□ -0,45
Trim47-201ENSMUST00000021120 Gm20661K7N787 53 aa12,22□□□□□ -0,45
Trim47-201ENSMUST00000021120 Gm9821Q8K076 103 aa12,18□□□□□ -0,46
Trim47-201ENSMUST00000021120 ApobE9Q414 4505 aa12,16□□□□□ -0,46
Trim47-201ENSMUST00000021120 Igkv3-5A0A140T8M6 119 aa12,15□□□□□ -0,46
Trim47-201ENSMUST00000021120 Defb39Q70KL3 74 aa12,07□□□□□ -0,48
Trim47-201ENSMUST00000021120 Limd2Q8BGB5 128 aa12,07□□□□□ -0,48
Trim47-201ENSMUST00000021120 Ryr1E9PZQ0 5035 aa12,05□□□□□ -0,48
Trim47-201ENSMUST00000021120 2310034C09RikQ9D746 214 aa12,04□□□□□ -0,48
Trim47-201ENSMUST00000021120 Znf706Q9D115 76 aaKnown RBP12,02□□□□□ -0,48
Trim47-201ENSMUST00000021120 Defb38Q7TNV7 63 aa11,99□□□□□ -0,49
Trim47-201ENSMUST00000021120 SacsQ9JLC8 4582 aa11,99□□□□□ -0,49
Trim47-201ENSMUST00000021120 Uqcr11Q9CPX8 56 aa11,97□□□□□ -0,49
Trim47-201ENSMUST00000021120 Hectd4E9Q2E4 4418 aa11,97□□□□□ -0,49
Trim47-201ENSMUST00000021120 Ndufs5Q99LY9 106 aa11,95□□□□□ -0,5
Trim47-201ENSMUST00000021120 Cypt15B1AXS0 87 aa11,94□□□□□ -0,5
Trim47-201ENSMUST00000021120 RetnlbQ99P86 105 aa11,94□□□□□ -0,5
Trim47-201ENSMUST00000021120 Gm16253D3Z167 63 aa11,94□□□□□ -0,5
Trim47-201ENSMUST00000021120 Anapc11Q9CPX9 84 aa11,94□□□□□ -0,5
Trim47-201ENSMUST00000021120 Lrp1bQ9JI18 4599 aa11,93□□□□□ -0,5
Trim47-201ENSMUST00000021120 Cypt14J3QPF7 87 aa11,93□□□□□ -0,5
Trim47-201ENSMUST00000021120 Vps13bQ80TY5 3993 aa11,86□□□□□ -0,51
Trim47-201ENSMUST00000021120 Gm21798J3QNU5 87 aa11,84□□□□□ -0,51
Trim47-201ENSMUST00000021120 Gm12216A0A1W2P827 62 aa11,83□□□□□ -0,52
Trim47-201ENSMUST00000021120 Q8BGJ3 129 aa11,83□□□□□ -0,52
Trim47-201ENSMUST00000021120 Kmt2cQ8BRH4 4903 aa11,82□□□□□ -0,52
Trim47-201ENSMUST00000021120 Fat2Q5F226 4351 aa11,78□□□□□ -0,52
Trim47-201ENSMUST00000021120 Pkhd1l1Q80ZA4 4249 aa11,76□□□□□ -0,53
Trim47-201ENSMUST00000021120 Dnah8Q91XQ0 4731 aa11,73□□□□□ -0,53
Trim47-201ENSMUST00000021120 Krtap19-5O08632 62 aa11,71□□□□□ -0,54
Trim47-201ENSMUST00000021120 Defb13Q8R2I4 64 aa11,67□□□□□ -0,54
Trim47-201ENSMUST00000021120 Pla2g10Q9QXX3 151 aa11,66□□□□□ -0,54
Trim47-201ENSMUST00000021120 Spaca4Q80ZQ0 127 aa11,62□□□□□ -0,55
Trim47-201ENSMUST00000021120 Lrp1Q91ZX7 4545 aaKnown RBP11,56□□□□□ -0,56
Trim47-201ENSMUST00000021120 Abca13Q5SSE9 5034 aa11,53□□□□□ -0,56
Trim47-201ENSMUST00000021120 Herc2Q4U2R1 4836 aa11,51□□□□□ -0,57
Trim47-201ENSMUST00000021120 Fat3Q8BNA6 4555 aa11,5□□□□□ -0,57
Trim47-201ENSMUST00000021120 Gm20538F6Z9R1 75 aa11,48□□□□□ -0,57
Trim47-201ENSMUST00000021120 Gm10999F6Q4M4 69 aa11,47□□□□□ -0,57
Trim47-201ENSMUST00000021120 Birc6O88738 4882 aa11,44□□□□□ -0,58
Trim47-201ENSMUST00000021120 2310079G19RikQ9D6L6 185 aa11,42□□□□□ -0,58
Trim47-201ENSMUST00000021120 D6Ertd527eA0A0N4SWI3 464 aa11,41□□□□□ -0,58
Trim47-201ENSMUST00000021120 Kiaa1109A2AAE1 5005 aa11,39□□□□□ -0,59
Trim47-201ENSMUST00000021120 Rps29P62274 56 aa11,35□□□□□ -0,59
Trim47-201ENSMUST00000021120 Dnhd1D3Z2X2 4750 aa11,34□□□□□ -0,59
Trim47-201ENSMUST00000021120 Mp68P56379 58 aa11,33□□□□□ -0,59
Trim47-201ENSMUST00000021120 Krtap3-2Q9D638 99 aa11,29□□□□□ -0,6
Trim47-201ENSMUST00000021120 Krtap3-3Q9D7P0 99 aa11,29□□□□□ -0,6
Trim47-201ENSMUST00000021120 A930033H14RikG5E8X6 103 aa11,26□□□□□ -0,61
Trim47-201ENSMUST00000021120 Gm9736A0A1W2P7N1 277 aa11,25□□□□□ -0,61
Trim47-201ENSMUST00000021120 Defb1P56386 69 aa11,24□□□□□ -0,61
Trim47-201ENSMUST00000021120 Romo1P60603 79 aa11,18□□□□□ -0,62
Trim47-201ENSMUST00000021120 Mycbp2Q7TPH6 4711 aa11,18□□□□□ -0,62
Trim47-201ENSMUST00000021120 4930507D05RikQ8C9C9 103 aa11,17□□□□□ -0,62
Trim47-201ENSMUST00000021120 HydinQ80W93 5154 aa11,17□□□□□ -0,62
Trim47-201ENSMUST00000021120 PcloQ9QYX7 5068 aa11,04□□□□□ -0,64
Trim47-201ENSMUST00000021120 Gm11939A2A592 99 aa11,03□□□□□ -0,64
Trim47-201ENSMUST00000021120 Gm4491E0CX42 125 aa11□□□□□ -0,65
Trim47-201ENSMUST00000021120 Gm5965D3Z724 196 aa10,99□□□□□ -0,65
Trim47-201ENSMUST00000021120 Gm5767A0A0J9YTU8 78 aa10,96□□□□□ -0,66
Trim47-201ENSMUST00000021120 Lce1mQ9CR91 182 aa10,93□□□□□ -0,66
Trim47-201ENSMUST00000021120 Lrp2A2ARV4 4660 aa10,89□□□□□ -0,67
Trim47-201ENSMUST00000021120 Gm20537G3UYK7 97 aa10,88□□□□□ -0,67
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms