RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 Notch1Q01705 2531 aa10.42□□□□□ -0.74
Shroom3-211ENSMUST00000225438 Cystm1Q8K353 104 aa10.41□□□□□ -0.74
Shroom3-211ENSMUST00000225438 Gm42715A0A087WP63 3095 aaKnown RBP10.4□□□□□ -0.74
Shroom3-211ENSMUST00000225438 Gm9195A0A140LHT4 2805 aa10.4□□□□□ -0.74
Shroom3-211ENSMUST00000225438 Gm36176A0A1W2P8D5 158 aa10.38□□□□□ -0.75
Shroom3-211ENSMUST00000225438 PcntP48725 2898 aa10.37□□□□□ -0.75
Shroom3-211ENSMUST00000225438 A730071L15RikQ8C4X0 137 aa10.34□□□□□ -0.75
Shroom3-211ENSMUST00000225438 Hectd1Q69ZR2 2618 aaKnown RBP10.32□□□□□ -0.76
Shroom3-211ENSMUST00000225438 Gm5767A0A0J9YTU8 78 aa10.32□□□□□ -0.76
Shroom3-211ENSMUST00000225438 Krtap29-1A2A5X4 342 aa10.32□□□□□ -0.76
Shroom3-211ENSMUST00000225438 Rpl37Q9D823 97 aa10.3□□□□□ -0.76
Shroom3-211ENSMUST00000225438 Stab1Q8R4Y4 2571 aa10.3□□□□□ -0.76
Shroom3-211ENSMUST00000225438 Kmt2bO08550 2713 aa10.3□□□□□ -0.76
Shroom3-211ENSMUST00000225438 Gm3646F6S692 53 aa10.29□□□□□ -0.76
Shroom3-211ENSMUST00000225438 Akap13E9Q394 2776 aa10.28□□□□□ -0.76
Shroom3-211ENSMUST00000225438 Ep400Q8CHI8 3072 aaKnown RBP10.25□□□□□ -0.77
Shroom3-211ENSMUST00000225438 BC029722A0A0N4SW31 51 aa10.24□□□□□ -0.77
Shroom3-211ENSMUST00000225438 Romo1P60603 79 aa10.24□□□□□ -0.77
Shroom3-211ENSMUST00000225438 Gm19426M0QWC7 77 aa10.24□□□□□ -0.77
Shroom3-211ENSMUST00000225438 Dnah12Q3V0Q1 3086 aa10.22□□□□□ -0.77
Shroom3-211ENSMUST00000225438 Mast4Q811L6 2618 aa10.16□□□□□ -0.78
Shroom3-211ENSMUST00000225438 2310050C09RikG5E8Z3 280 aa10.16□□□□□ -0.78
Shroom3-211ENSMUST00000225438 Krtap13O88375 197 aa10.15□□□□□ -0.78
Shroom3-211ENSMUST00000225438 Prune2Q52KR3 3084 aa10.12□□□□□ -0.79
Shroom3-211ENSMUST00000225438 Gm10382Q3V0T5 144 aa10.1□□□□□ -0.79
Shroom3-211ENSMUST00000225438 NipblQ6KCD5 2798 aaKnown RBP10.08□□□□□ -0.8
Shroom3-211ENSMUST00000225438 Cep350E9Q309 3095 aa10.07□□□□□ -0.8
Shroom3-211ENSMUST00000225438 Prrc2cQ3TLH4 2846 aaKnown RBP10.05□□□□□ -0.8
Shroom3-211ENSMUST00000225438 Igsf10Q3V1M1 2594 aa10.03□□□□□ -0.8
Shroom3-211ENSMUST00000225438 Gm9507D3Z5T3 223 aa10.01□□□□□ -0.81
Shroom3-211ENSMUST00000225438 TrioQ0KL02 3102 aa10□□□□□ -0.81
Shroom3-211ENSMUST00000225438 9530053A07RikE9PVG8 2581 aa9.97□□□□□ -0.81
Shroom3-211ENSMUST00000225438 Itpr3P70227 2670 aa9.97□□□□□ -0.81
Shroom3-211ENSMUST00000225438 Krtap14O08640 167 aa9.95□□□□□ -0.82
Shroom3-211ENSMUST00000225438 UtrnE9Q6R7 3430 aa9.95□□□□□ -0.82
Shroom3-211ENSMUST00000225438 4933415A04RikQ9D443 101 aa9.93□□□□□ -0.82
Shroom3-211ENSMUST00000225438 Chd6A3KFM7 2711 aa9.93□□□□□ -0.82
Shroom3-211ENSMUST00000225438 Rps29P62274 56 aa9.93□□□□□ -0.82
Shroom3-211ENSMUST00000225438 Tep1P97499 2629 aa9.93□□□□□ -0.82
Shroom3-211ENSMUST00000225438 Jbts17Q8CE72 3214 aa9.92□□□□□ -0.82
Shroom3-211ENSMUST00000225438 1700042G07RikB1AUF7 90 aa9.89□□□□□ -0.83
Shroom3-211ENSMUST00000225438 Gm2310J3QNJ2 377 aa9.89□□□□□ -0.83
Shroom3-211ENSMUST00000225438 Itpr1P11881 2749 aa9.89□□□□□ -0.83
Shroom3-211ENSMUST00000225438 Ubr5Q80TP3 2792 aa9.87□□□□□ -0.83
Shroom3-211ENSMUST00000225438 Krtap10-4Q08EG8 221 aa9.86□□□□□ -0.83
Shroom3-211ENSMUST00000225438 2310061N02RikQ9D6S9 174 aa9.86□□□□□ -0.83
Shroom3-211ENSMUST00000225438 Map1aQ9QYR6 2776 aa9.86□□□□□ -0.83
Shroom3-211ENSMUST00000225438 Cox6b2Q80ZN9 88 aa9.85□□□□□ -0.83
Shroom3-211ENSMUST00000225438 Stab2Q8R4U0 2559 aa9.82□□□□□ -0.84
Shroom3-211ENSMUST00000225438 Tnp2P11378 117 aa9.77□□□□□ -0.85
Shroom3-211ENSMUST00000225438 Krtap10-10A0A1W2P7T6 217 aa9.75□□□□□ -0.85
Shroom3-211ENSMUST00000225438 Tnrc18Q80WC3 2878 aa9.75□□□□□ -0.85
Shroom3-211ENSMUST00000225438 Lama2Q60675 3118 aaKnown RBP9.74□□□□□ -0.85
Shroom3-211ENSMUST00000225438 Nbeal2Q6ZQA0 2742 aa9.73□□□□□ -0.85
Shroom3-211ENSMUST00000225438 Pkd1l1Q8R526 2615 aa9.71□□□□□ -0.85
Shroom3-211ENSMUST00000225438 Lama3Q61789 3330 aa9.7□□□□□ -0.86
Shroom3-211ENSMUST00000225438 Bod1lE9Q6J5 3032 aa9.7□□□□□ -0.86
Shroom3-211ENSMUST00000225438 Myo15bI7HPW8 3033 aa9.66□□□□□ -0.86
Shroom3-211ENSMUST00000225438 Col12a1Q60847 3120 aa9.66□□□□□ -0.86
Shroom3-211ENSMUST00000225438 Chd7A2AJK6 2986 aaKnown RBP9.64□□□□□ -0.87
Shroom3-211ENSMUST00000225438 MgaA2AWL7 3003 aaKnown RBP9.63□□□□□ -0.87
Shroom3-211ENSMUST00000225438 Gm7173A0A0G2JEB6 3132 aa9.62□□□□□ -0.87
Shroom3-211ENSMUST00000225438 Mki67E9PVX6 3177 aaKnown RBP9.6□□□□□ -0.87
Shroom3-211ENSMUST00000225438 D6Ertd527eA0A0N4SWI3 464 aa9.6□□□□□ -0.87
Shroom3-211ENSMUST00000225438 Ash1lQ99MY8 2958 aa9.59□□□□□ -0.87
Shroom3-211ENSMUST00000225438 Fbn2Q61555 2907 aa9.58□□□□□ -0.88
Shroom3-211ENSMUST00000225438 Gm21887J3QQ04 176 aa9.57□□□□□ -0.88
Shroom3-211ENSMUST00000225438 Dmxl1Q6PNC0 3013 aa9.56□□□□□ -0.88
Shroom3-211ENSMUST00000225438 Col6a5A6H584 2640 aa9.55□□□□□ -0.88
Shroom3-211ENSMUST00000225438 SmcpP15265 143 aa9.52□□□□□ -0.88
Shroom3-211ENSMUST00000225438 FcgbpE9Q0B5 2583 aa9.5□□□□□ -0.89
Shroom3-211ENSMUST00000225438 Rev3lQ61493 3122 aa9.49□□□□□ -0.89
Shroom3-211ENSMUST00000225438 Gm2696A0A1W2P709 240 aa9.49□□□□□ -0.89
Shroom3-211ENSMUST00000225438 KalrnA2CG49 2964 aa9.43□□□□□ -0.9
Shroom3-211ENSMUST00000225438 HttP42859 3119 aa9.42□□□□□ -0.9
Shroom3-211ENSMUST00000225438 Hivep1Q03172 2688 aa9.41□□□□□ -0.9
Shroom3-211ENSMUST00000225438 Muc2Q80Z19 2680 aa9.4□□□□□ -0.9
Shroom3-211ENSMUST00000225438 Ndufaf8A2AMZ4 74 aa9.4□□□□□ -0.91
Shroom3-211ENSMUST00000225438 Gm5965D3Z724 196 aa9.38□□□□□ -0.91
Shroom3-211ENSMUST00000225438 Tnp1P10856 55 aa9.37□□□□□ -0.91
Shroom3-211ENSMUST00000225438 Ranbp2Q9ERU9 3053 aaKnown RBP9.35□□□□□ -0.91
Shroom3-211ENSMUST00000225438 Itpr2Q9Z329 2701 aa9.34□□□□□ -0.91
Shroom3-211ENSMUST00000225438 Usp34Q6ZQ93 3582 aa9.33□□□□□ -0.92
Shroom3-211ENSMUST00000225438 2310057N15RikQ9D6T8 200 aa9.32□□□□□ -0.92
Shroom3-211ENSMUST00000225438 Tex15F8VPN2 2785 aa9.3□□□□□ -0.92
Shroom3-211ENSMUST00000225438 Gm40193A0A1B0GT39 78 aa9.25□□□□□ -0.93
Shroom3-211ENSMUST00000225438 Cfap54Q8C6S9 3106 aa9.25□□□□□ -0.93
Shroom3-211ENSMUST00000225438 TgO08710 2766 aa9.24□□□□□ -0.93
Shroom3-211ENSMUST00000225438 Srrm2Q8BTI8 2703 aaKnown RBP9.2□□□□□ -0.94
Shroom3-211ENSMUST00000225438 Celsr1O35161 3034 aa9.15□□□□□ -0.94
Shroom3-211ENSMUST00000225438 Cdh23Q99PF4 3354 aa9.14□□□□□ -0.95
Shroom3-211ENSMUST00000225438 Gm9112A2AI92 75 aa9.11□□□□□ -0.95
Shroom3-211ENSMUST00000225438 AtmQ62388 3066 aa9.11□□□□□ -0.95
Shroom3-211ENSMUST00000225438 AspmQ8CJ27 3122 aa9.1□□□□□ -0.95
Shroom3-211ENSMUST00000225438 Igfn1Q3KNY0 2849 aa9.1□□□□□ -0.95
Shroom3-211ENSMUST00000225438 A930033H14RikG5E8X6 103 aa9.06□□□□□ -0.96
Shroom3-211ENSMUST00000225438 ApcQ61315 2845 aa9.04□□□□□ -0.96
Shroom3-211ENSMUST00000225438 Gm20537G3UYK7 97 aa9.04□□□□□ -0.96
Shroom3-211ENSMUST00000225438 Vps13aQ5H8C4 3166 aa9.03□□□□□ -0.96
Shroom3-211ENSMUST00000225438 Utp20Q5XG71 2788 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms