RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 RetnlbQ99P86 105 aa11.16□□□□□ -0.62
Ebf3-204ENSMUST00000169486 Cystm1Q8K353 104 aa11.15□□□□□ -0.62
Ebf3-204ENSMUST00000169486 Mp68P56379 58 aa11.14□□□□□ -0.63
Ebf3-204ENSMUST00000169486 Chd6A3KFM7 2711 aa11.14□□□□□ -0.63
Ebf3-204ENSMUST00000169486 Ranbp2Q9ERU9 3053 aaKnown RBP11.13□□□□□ -0.63
Ebf3-204ENSMUST00000169486 Gm11565A2A4M7 156 aa11.1□□□□□ -0.63
Ebf3-204ENSMUST00000169486 Ubr5Q80TP3 2792 aa11.1□□□□□ -0.63
Ebf3-204ENSMUST00000169486 AtmQ62388 3066 aa11.09□□□□□ -0.63
Ebf3-204ENSMUST00000169486 Fam104aA2A6P4 185 aa11.09□□□□□ -0.63
Ebf3-204ENSMUST00000169486 Dmxl1Q6PNC0 3013 aa11.07□□□□□ -0.64
Ebf3-204ENSMUST00000169486 Fbn2Q61555 2907 aa11.07□□□□□ -0.64
Ebf3-204ENSMUST00000169486 Plac8Q9JI48 112 aa11.07□□□□□ -0.64
Ebf3-204ENSMUST00000169486 Zcchc13Q9D548 170 aa11.01□□□□□ -0.65
Ebf3-204ENSMUST00000169486 Frem2Q6NVD0 3160 aa10.99□□□□□ -0.65
Ebf3-204ENSMUST00000169486 MgaA2AWL7 3003 aaKnown RBP10.97□□□□□ -0.65
Ebf3-204ENSMUST00000169486 2310034C09RikQ9D746 214 aa10.96□□□□□ -0.65
Ebf3-204ENSMUST00000169486 KalrnA2CG49 2964 aa10.95□□□□□ -0.66
Ebf3-204ENSMUST00000169486 Gm7138L7N2C3 230 aa10.95□□□□□ -0.66
Ebf3-204ENSMUST00000169486 Gm3238W4VSP7 230 aa10.95□□□□□ -0.66
Ebf3-204ENSMUST00000169486 Rnase13Q5GAM7 153 aa10.95□□□□□ -0.66
Ebf3-204ENSMUST00000169486 Lrrc37aB1AWG4 3215 aa10.94□□□□□ -0.66
Ebf3-204ENSMUST00000169486 AW011738F6S7Q2 159 aa10.93□□□□□ -0.66
Ebf3-204ENSMUST00000169486 Gm21798J3QNU5 87 aa10.93□□□□□ -0.66
Ebf3-204ENSMUST00000169486 AspmQ8CJ27 3122 aa10.91□□□□□ -0.66
Ebf3-204ENSMUST00000169486 Tep1P97499 2629 aa10.9□□□□□ -0.66
Ebf3-204ENSMUST00000169486 6030445D17RikE9Q8F9 148 aa10.85□□□□□ -0.67
Ebf3-204ENSMUST00000169486 Itpr3P70227 2670 aa10.85□□□□□ -0.67
Ebf3-204ENSMUST00000169486 Gm26620Q9CY65 116 aa10.84□□□□□ -0.67
Ebf3-204ENSMUST00000169486 Gm7137J3QMW1 236 aa10.84□□□□□ -0.67
Ebf3-204ENSMUST00000169486 A730071L15RikQ8C4X0 137 aa10.84□□□□□ -0.67
Ebf3-204ENSMUST00000169486 Cypt14J3QPF7 87 aa10.83□□□□□ -0.68
Ebf3-204ENSMUST00000169486 FrylF8VQ05 3007 aa10.82□□□□□ -0.68
Ebf3-204ENSMUST00000169486 Lama1P19137 3084 aa10.79□□□□□ -0.68
Ebf3-204ENSMUST00000169486 Gm3880A0A1B0GSB3 72 aa10.76□□□□□ -0.69
Ebf3-204ENSMUST00000169486 Pla2g10Q9QXX3 151 aa10.76□□□□□ -0.69
Ebf3-204ENSMUST00000169486 Pkd1l1Q8R526 2615 aa10.75□□□□□ -0.69
Ebf3-204ENSMUST00000169486 9530053A07RikE9PVG8 2581 aa10.73□□□□□ -0.69
Ebf3-204ENSMUST00000169486 NbdyA0A0N4SUI7 68 aa10.73□□□□□ -0.69
Ebf3-204ENSMUST00000169486 Stab2Q8R4U0 2559 aa10.73□□□□□ -0.69
Ebf3-204ENSMUST00000169486 Nbeal2Q6ZQA0 2742 aa10.73□□□□□ -0.69
Ebf3-204ENSMUST00000169486 Tex15F8VPN2 2785 aa10.72□□□□□ -0.69
Ebf3-204ENSMUST00000169486 Brca2P97929 3329 aa10.72□□□□□ -0.69
Ebf3-204ENSMUST00000169486 Celsr3Q91ZI0 3301 aa10.72□□□□□ -0.69
Ebf3-204ENSMUST00000169486 Gm10065F6TJM2 114 aa10.7□□□□□ -0.7
Ebf3-204ENSMUST00000169486 Gm10139O88245 57 aa10.69□□□□□ -0.7
Ebf3-204ENSMUST00000169486 Igsf10Q3V1M1 2594 aa10.68□□□□□ -0.7
Ebf3-204ENSMUST00000169486 Celsr1O35161 3034 aa10.66□□□□□ -0.7
Ebf3-204ENSMUST00000169486 Wdfy4E9Q2M9 3149 aa10.66□□□□□ -0.7
Ebf3-204ENSMUST00000169486 Gm9508A0A1W2P7W0 230 aa10.66□□□□□ -0.7
Ebf3-204ENSMUST00000169486 Col6a5A6H584 2640 aa10.65□□□□□ -0.7
Ebf3-204ENSMUST00000169486 Sprr1aQ62266 144 aa10.65□□□□□ -0.7
Ebf3-204ENSMUST00000169486 Gm3646F6S692 53 aa10.65□□□□□ -0.71
Ebf3-204ENSMUST00000169486 Muc2Q80Z19 2680 aa10.64□□□□□ -0.71
Ebf3-204ENSMUST00000169486 CriptO70333 101 aa10.63□□□□□ -0.71
Ebf3-204ENSMUST00000169486 Col6a3E9PWQ3 3284 aa10.63□□□□□ -0.71
Ebf3-204ENSMUST00000169486 Odf3bQ5M8M2 238 aa10.62□□□□□ -0.71
Ebf3-204ENSMUST00000169486 SmcpP15265 143 aa10.61□□□□□ -0.71
Ebf3-204ENSMUST00000169486 BptfA2A654 3036 aaKnown RBP10.61□□□□□ -0.71
Ebf3-204ENSMUST00000169486 FryE9Q8I9 3020 aa10.6□□□□□ -0.71
Ebf3-204ENSMUST00000169486 OxtP35454 125 aa10.59□□□□□ -0.71
Ebf3-204ENSMUST00000169486 Gm37013Q8K491 104 aa10.59□□□□□ -0.71
Ebf3-204ENSMUST00000169486 Gm4491E0CX42 125 aa10.57□□□□□ -0.72
Ebf3-204ENSMUST00000169486 Gm9955Q8CEJ8 102 aa10.56□□□□□ -0.72
Ebf3-204ENSMUST00000169486 Hivep1Q03172 2688 aa10.51□□□□□ -0.73
Ebf3-204ENSMUST00000169486 Wdfy3Q6VNB8 3508 aa10.49□□□□□ -0.73
Ebf3-204ENSMUST00000169486 Gm20538F6Z9R1 75 aa10.49□□□□□ -0.73
Ebf3-204ENSMUST00000169486 Gm16253D3Z167 63 aa10.48□□□□□ -0.73
Ebf3-204ENSMUST00000169486 VcanQ62059 3357 aa10.47□□□□□ -0.73
Ebf3-204ENSMUST00000169486 Dmxl2Q8BPN8 3032 aa10.46□□□□□ -0.74
Ebf3-204ENSMUST00000169486 Gm9821Q8K076 103 aa10.44□□□□□ -0.74
Ebf3-204ENSMUST00000169486 4933415A04RikQ9D443 101 aa10.43□□□□□ -0.74
Ebf3-204ENSMUST00000169486 Igfn1Q3KNY0 2849 aa10.41□□□□□ -0.74
Ebf3-204ENSMUST00000169486 DspE9Q557 2883 aaKnown RBP10.41□□□□□ -0.74
Ebf3-204ENSMUST00000169486 Gm36176A0A1W2P8D5 158 aa10.4□□□□□ -0.74
Ebf3-204ENSMUST00000169486 1700042G07RikB1AUF7 90 aa10.4□□□□□ -0.75
Ebf3-204ENSMUST00000169486 Adgrg4B7ZCC9 3073 aa10.35□□□□□ -0.75
Ebf3-204ENSMUST00000169486 NbeaQ9EPN1 2936 aa10.32□□□□□ -0.76
Ebf3-204ENSMUST00000169486 Gm17349F7BGH6 99 aa10.32□□□□□ -0.76
Ebf3-204ENSMUST00000169486 Utp20Q5XG71 2788 aaKnown RBP10.3□□□□□ -0.76
Ebf3-204ENSMUST00000169486 Spink7Q6IE32 76 aa10.29□□□□□ -0.76
Ebf3-204ENSMUST00000169486 DmdP11531 3678 aa10.27□□□□□ -0.77
Ebf3-204ENSMUST00000169486 Zzef1Q5SSH7 2924 aa10.27□□□□□ -0.77
Ebf3-204ENSMUST00000169486 Krtap15-1Q9QZU5 150 aa10.25□□□□□ -0.77
Ebf3-204ENSMUST00000169486 Dchs1E9PVD3 3291 aa10.21□□□□□ -0.77
Ebf3-204ENSMUST00000169486 Celsr2Q9R0M0 2920 aa10.21□□□□□ -0.77
Ebf3-204ENSMUST00000169486 Myo15aQ9QZZ4 3511 aa10.21□□□□□ -0.77
Ebf3-204ENSMUST00000169486 TgO08710 2766 aa10.21□□□□□ -0.78
Ebf3-204ENSMUST00000169486 Dchs2A0A0A6YW72 3346 aa10.2□□□□□ -0.78
Ebf3-204ENSMUST00000169486 FlncQ8VHX6 2726 aaKnown RBP10.19□□□□□ -0.78
Ebf3-204ENSMUST00000169486 Krtap13O88375 197 aa10.18□□□□□ -0.78
Ebf3-204ENSMUST00000169486 ApcQ61315 2845 aa10.18□□□□□ -0.78
Ebf3-204ENSMUST00000169486 Krtap29-1A2A5X4 342 aa10.17□□□□□ -0.78
Ebf3-204ENSMUST00000169486 RelnQ60841 3461 aa10.17□□□□□ -0.78
Ebf3-204ENSMUST00000169486 Gm2310J3QNJ2 377 aa10.16□□□□□ -0.78
Ebf3-204ENSMUST00000169486 Rpl37Q9D823 97 aa10.15□□□□□ -0.78
Ebf3-204ENSMUST00000169486 FcgbpE9Q0B5 2583 aa10.15□□□□□ -0.78
Ebf3-204ENSMUST00000169486 Itpr2Q9Z329 2701 aa10.15□□□□□ -0.79
Ebf3-204ENSMUST00000169486 Sec61bQ9CQS8 96 aaKnown RBP10.14□□□□□ -0.79
Ebf3-204ENSMUST00000169486 SpegQ62407 3262 aa10.14□□□□□ -0.79
Ebf3-204ENSMUST00000169486 Chd9Q8BYH8 2885 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms