RNA–Protein interactions for RNA: ENSMUST00000113457.8

Col4a3-201, Transcript of Collagen alpha-3(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3, Length 8,554 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3-201ENSMUST00000113457 MgaA2AWL7 3003 aaKnown RBP6.91□□□□□ -1.3
Col4a3-201ENSMUST00000113457 Dmxl1Q6PNC0 3013 aa6.91□□□□□ -1.3
Col4a3-201ENSMUST00000113457 Krtap11-1E9Q2E9 183 aa6.9□□□□□ -1.3
Col4a3-201ENSMUST00000113457 Sprr4Q8CGN8 76 aa6.9□□□□□ -1.3
Col4a3-201ENSMUST00000113457 Gm3880A0A1B0GSB3 72 aa6.9□□□□□ -1.31
Col4a3-201ENSMUST00000113457 Plac8Q9JI48 112 aa6.89□□□□□ -1.31
Col4a3-201ENSMUST00000113457 A330070K13RikQ8CA53 115 aa6.88□□□□□ -1.31
Col4a3-201ENSMUST00000113457 Gm3285A0A1W2P7U0 201 aa6.88□□□□□ -1.31
Col4a3-201ENSMUST00000113457 Gm10772F7AIG4 85 aa6.87□□□□□ -1.31
Col4a3-201ENSMUST00000113457 Lama2Q60675 3118 aaKnown RBP6.86□□□□□ -1.31
Col4a3-201ENSMUST00000113457 Jbts17Q8CE72 3214 aa6.85□□□□□ -1.31
Col4a3-201ENSMUST00000113457 Lypd5Q9D7Z7 256 aa6.85□□□□□ -1.31
Col4a3-201ENSMUST00000113457 FrylF8VQ05 3007 aa6.85□□□□□ -1.31
Col4a3-201ENSMUST00000113457 ApcQ61315 2845 aa6.84□□□□□ -1.31
Col4a3-201ENSMUST00000113457 CnbpP53996 178 aaKnown RBP6.84□□□□□ -1.31
Col4a3-201ENSMUST00000113457 Golgb1E9PVZ8 3238 aa6.84□□□□□ -1.31
Col4a3-201ENSMUST00000113457 Krtap15-1Q9QZU5 150 aa6.83□□□□□ -1.32
Col4a3-201ENSMUST00000113457 Ash1lQ99MY8 2958 aa6.81□□□□□ -1.32
Col4a3-201ENSMUST00000113457 Igfn1Q3KNY0 2849 aa6.8□□□□□ -1.32
Col4a3-201ENSMUST00000113457 Gm4491E0CX42 125 aa6.8□□□□□ -1.32
Col4a3-201ENSMUST00000113457 Gm10320E9PW43 113 aa6.79□□□□□ -1.32
Col4a3-201ENSMUST00000113457 DspE9Q557 2883 aaKnown RBP6.78□□□□□ -1.32
Col4a3-201ENSMUST00000113457 Prune2Q52KR3 3084 aa6.78□□□□□ -1.32
Col4a3-201ENSMUST00000113457 Sec61bQ9CQS8 96 aaKnown RBP6.77□□□□□ -1.33
Col4a3-201ENSMUST00000113457 AY074887Q8R5F9 132 aa6.77□□□□□ -1.33
Col4a3-201ENSMUST00000113457 Zcchc13Q9D548 170 aa6.77□□□□□ -1.33
Col4a3-201ENSMUST00000113457 SrcapA0A087WQ44 3271 aa6.73□□□□□ -1.33
Col4a3-201ENSMUST00000113457 FcgbpE9Q0B5 2583 aa6.73□□□□□ -1.33
Col4a3-201ENSMUST00000113457 Nf1Q04690 2841 aa6.71□□□□□ -1.34
Col4a3-201ENSMUST00000113457 Pdzd2E9Q1M1 2796 aa6.71□□□□□ -1.34
Col4a3-201ENSMUST00000113457 Gm10065F6TJM2 114 aa6.7□□□□□ -1.34
Col4a3-201ENSMUST00000113457 6030445D17RikE9Q8F9 148 aa6.7□□□□□ -1.34
Col4a3-201ENSMUST00000113457 Bod1lE9Q6J5 3032 aa6.69□□□□□ -1.34
Col4a3-201ENSMUST00000113457 Cypt14J3QPF7 87 aa6.69□□□□□ -1.34
Col4a3-201ENSMUST00000113457 Fam104aA2A6P4 185 aa6.68□□□□□ -1.34
Col4a3-201ENSMUST00000113457 Zzef1Q5SSH7 2924 aa6.67□□□□□ -1.34
Col4a3-201ENSMUST00000113457 NbeaQ9EPN1 2936 aa6.66□□□□□ -1.34
Col4a3-201ENSMUST00000113457 Gm19426M0QWC7 77 aa6.66□□□□□ -1.34
Col4a3-201ENSMUST00000113457 NbdyA0A0N4SUI7 68 aa6.66□□□□□ -1.34
Col4a3-201ENSMUST00000113457 Srrm2Q8BTI8 2703 aaKnown RBP6.63□□□□□ -1.35
Col4a3-201ENSMUST00000113457 Usp34Q6ZQ93 3582 aa6.62□□□□□ -1.35
Col4a3-201ENSMUST00000113457 C530025M09RikF6RGA8 229 aa6.61□□□□□ -1.35
Col4a3-201ENSMUST00000113457 Gm7173A0A0G2JEB6 3132 aa6.59□□□□□ -1.35
Col4a3-201ENSMUST00000113457 Fam229bQ8CF36 80 aa6.57□□□□□ -1.36
Col4a3-201ENSMUST00000113457 Smim29Q8R043 75 aa6.57□□□□□ -1.36
Col4a3-201ENSMUST00000113457 Gm3233E9Q2H5 230 aa6.57□□□□□ -1.36
Col4a3-201ENSMUST00000113457 TgO08710 2766 aa6.57□□□□□ -1.36
Col4a3-201ENSMUST00000113457 1700042G07RikB1AUF7 90 aa6.57□□□□□ -1.36
Col4a3-201ENSMUST00000113457 Odf3bQ5M8M2 238 aa6.57□□□□□ -1.36
Col4a3-201ENSMUST00000113457 Gm3646F6S692 53 aa6.55□□□□□ -1.36
Col4a3-201ENSMUST00000113457 Tenm1Q9WTS4 2731 aa6.53□□□□□ -1.36
Col4a3-201ENSMUST00000113457 BC029722A0A0N4SW31 51 aa6.52□□□□□ -1.37
Col4a3-201ENSMUST00000113457 Gm5767A0A0J9YTU8 78 aa6.5□□□□□ -1.37
Col4a3-201ENSMUST00000113457 Gm10382Q3V0T5 144 aa6.49□□□□□ -1.37
Col4a3-201ENSMUST00000113457 Romo1P60603 79 aa6.48□□□□□ -1.37
Col4a3-201ENSMUST00000113457 Gm7138L7N2C3 230 aa6.48□□□□□ -1.37
Col4a3-201ENSMUST00000113457 Gm3238W4VSP7 230 aa6.48□□□□□ -1.37
Col4a3-201ENSMUST00000113457 Rev3lQ61493 3122 aa6.47□□□□□ -1.37
Col4a3-201ENSMUST00000113457 Trank1Q8BV79 2999 aa6.47□□□□□ -1.37
Col4a3-201ENSMUST00000113457 Rpl37Q9D823 97 aa6.47□□□□□ -1.37
Col4a3-201ENSMUST00000113457 Gm7137J3QMW1 236 aa6.43□□□□□ -1.38
Col4a3-201ENSMUST00000113457 4933415A04RikQ9D443 101 aa6.42□□□□□ -1.38
Col4a3-201ENSMUST00000113457 Vps13aQ5H8C4 3166 aa6.42□□□□□ -1.38
Col4a3-201ENSMUST00000113457 UtrnE9Q6R7 3430 aa6.42□□□□□ -1.38
Col4a3-201ENSMUST00000113457 Rps29P62274 56 aa6.42□□□□□ -1.38
Col4a3-201ENSMUST00000113457 Chd9Q8BYH8 2885 aa6.41□□□□□ -1.38
Col4a3-201ENSMUST00000113457 Celsr2Q9R0M0 2920 aa6.41□□□□□ -1.38
Col4a3-201ENSMUST00000113457 BptfA2A654 3036 aaKnown RBP6.41□□□□□ -1.38
Col4a3-201ENSMUST00000113457 Tenm3Q9WTS6 2715 aa6.41□□□□□ -1.38
Col4a3-201ENSMUST00000113457 Gm37013Q8K491 104 aa6.38□□□□□ -1.39
Col4a3-201ENSMUST00000113457 TrioQ0KL02 3102 aa6.37□□□□□ -1.39
Col4a3-201ENSMUST00000113457 Gm17349F7BGH6 99 aa6.36□□□□□ -1.39
Col4a3-201ENSMUST00000113457 Sprr1aQ62266 144 aa6.36□□□□□ -1.39
Col4a3-201ENSMUST00000113457 SmcpP15265 143 aa6.35□□□□□ -1.39
Col4a3-201ENSMUST00000113457 HttP42859 3119 aa6.35□□□□□ -1.39
Col4a3-201ENSMUST00000113457 Cystm1Q8K353 104 aa6.35□□□□□ -1.39
Col4a3-201ENSMUST00000113457 Gm9508A0A1W2P7W0 230 aa6.34□□□□□ -1.39
Col4a3-201ENSMUST00000113457 Mki67E9PVX6 3177 aaKnown RBP6.33□□□□□ -1.4
Col4a3-201ENSMUST00000113457 LrbaQ9ESE1 2856 aa6.32□□□□□ -1.4
Col4a3-201ENSMUST00000113457 Tenm4Q3UHK6 2771 aa6.31□□□□□ -1.4
Col4a3-201ENSMUST00000113457 Gm10139O88245 57 aa6.31□□□□□ -1.4
Col4a3-201ENSMUST00000113457 Cfap54Q8C6S9 3106 aa6.31□□□□□ -1.4
Col4a3-201ENSMUST00000113457 FryE9Q8I9 3020 aa6.3□□□□□ -1.4
Col4a3-201ENSMUST00000113457 Gm16253D3Z167 63 aa6.3□□□□□ -1.4
Col4a3-201ENSMUST00000113457 2310050C09RikG5E8Z3 280 aa6.3□□□□□ -1.4
Col4a3-201ENSMUST00000113457 Ranbp2Q9ERU9 3053 aaKnown RBP6.27□□□□□ -1.41
Col4a3-201ENSMUST00000113457 AtmQ62388 3066 aa6.23□□□□□ -1.41
Col4a3-201ENSMUST00000113457 Krtap29-1A2A5X4 342 aa6.23□□□□□ -1.41
Col4a3-201ENSMUST00000113457 Dmxl2Q8BPN8 3032 aa6.23□□□□□ -1.41
Col4a3-201ENSMUST00000113457 Lama3Q61789 3330 aa6.21□□□□□ -1.41
Col4a3-201ENSMUST00000113457 AspmQ8CJ27 3122 aa6.21□□□□□ -1.42
Col4a3-201ENSMUST00000113457 Col12a1Q60847 3120 aa6.18□□□□□ -1.42
Col4a3-201ENSMUST00000113457 A730071L15RikQ8C4X0 137 aa6.18□□□□□ -1.42
Col4a3-201ENSMUST00000113457 Cox6b2Q80ZN9 88 aa6.17□□□□□ -1.42
Col4a3-201ENSMUST00000113457 Wdfy4E9Q2M9 3149 aa6.17□□□□□ -1.42
Col4a3-201ENSMUST00000113457 Gm21887J3QQ04 176 aa6.15□□□□□ -1.43
Col4a3-201ENSMUST00000113457 Gm36176A0A1W2P8D5 158 aa6.13□□□□□ -1.43
Col4a3-201ENSMUST00000113457 Tnp1P10856 55 aa6.13□□□□□ -1.43
Col4a3-201ENSMUST00000113457 VwfQ8CIZ8 2813 aa6.12□□□□□ -1.43
Col4a3-201ENSMUST00000113457 Ndufaf8A2AMZ4 74 aa6.11□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms