RNA–Protein interactions for RNA: ENSMUST00000113457.8

Col4a3-201, Transcript of Collagen alpha-3(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3, Length 8,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3-201ENSMUST00000113457 Rhox8Q6VSS7 320 aa18.24■□□□□ 0.51
Col4a3-201ENSMUST00000113457 Rtl1Q7M732 1744 aa17.29■□□□□ 0.36
Col4a3-201ENSMUST00000113457 Rpgrip1Q9EPQ2 1331 aa16.94■□□□□ 0.3
Col4a3-201ENSMUST00000113457 NischQ80TM9 1593 aa16.88■□□□□ 0.29
Col4a3-201ENSMUST00000113457 Pelp1Q9DBD5 1123 aaKnown RBP16.84■□□□□ 0.29
Col4a3-201ENSMUST00000113457 Cngb1E1AZ71 1325 aa16.78■□□□□ 0.28
Col4a3-201ENSMUST00000113457 Ube2uB1AUC4 352 aa16.76■□□□□ 0.27
Col4a3-201ENSMUST00000113457 Las1lA2BE28 776 aaKnown RBP16.59■□□□□ 0.25
Col4a3-201ENSMUST00000113457 Ccdc180J3QNE4 1664 aa16.45■□□□□ 0.22
Col4a3-201ENSMUST00000113457 Wdr66E9Q743 1299 aa16.39■□□□□ 0.21
Col4a3-201ENSMUST00000113457 Zeb1Q64318 1117 aa16.39■□□□□ 0.21
Col4a3-201ENSMUST00000113457 Esf1Q3V1V3 845 aaKnown RBP16.37■□□□□ 0.21
Col4a3-201ENSMUST00000113457 Ehmt2Q9Z148 1263 aaKnown RBP16.33■□□□□ 0.21
Col4a3-201ENSMUST00000113457 Amer1Q7TS75 1132 aa16.26■□□□□ 0.19
Col4a3-201ENSMUST00000113457 Gm35339A0A140LHH9 1649 aa16.13■□□□□ 0.17
Col4a3-201ENSMUST00000113457 Npm2Q80W85 207 aa16.09■□□□□ 0.17
Col4a3-201ENSMUST00000113457 Abcc9P70170 1546 aa15.99■□□□□ 0.15
Col4a3-201ENSMUST00000113457 4930567H17RikQ3V0K5 233 aa15.97■□□□□ 0.15
Col4a3-201ENSMUST00000113457 Ccdc136Q3TVA9 1136 aa15.87■□□□□ 0.13
Col4a3-201ENSMUST00000113457 Myt1lP97500 1187 aa15.84■□□□□ 0.13
Col4a3-201ENSMUST00000113457 Trim41Q5NCC3 630 aa15.81■□□□□ 0.12
Col4a3-201ENSMUST00000113457 Gab3Q8BSM5 595 aa15.8■□□□□ 0.12
Col4a3-201ENSMUST00000113457 Slc24a1Q91WD8 1130 aa15.68■□□□□ 0.1
Col4a3-201ENSMUST00000113457 Myt1Q8CFC2 1127 aa15.68■□□□□ 0.1
Col4a3-201ENSMUST00000113457 Stra8P70278 393 aa15.57■□□□□ 0.08
Col4a3-201ENSMUST00000113457 CenpbP27790 599 aa15.55■□□□□ 0.08
Col4a3-201ENSMUST00000113457 Os9Q8K2C7 672 aa15.45■□□□□ 0.06
Col4a3-201ENSMUST00000113457 Abcc8B2RUS7 1588 aa15.44■□□□□ 0.06
Col4a3-201ENSMUST00000113457 Ttbk1Q6PCN3 1308 aa15.43■□□□□ 0.06
Col4a3-201ENSMUST00000113457 Anp32bQ9EST5 272 aaKnown RBP15.35■□□□□ 0.05
Col4a3-201ENSMUST00000113457 4933416C03RikQ3V063 378 aa15.35■□□□□ 0.05
Col4a3-201ENSMUST00000113457 NeflP08551 543 aa15.31■□□□□ 0.04
Col4a3-201ENSMUST00000113457 HrcG5E8J6 738 aa15.3■□□□□ 0.04
Col4a3-201ENSMUST00000113457 UbtfP25976 765 aaKnown RBP15.29■□□□□ 0.04
Col4a3-201ENSMUST00000113457 NrdcQ8BHG1 1161 aa15.2■□□□□ 0.02
Col4a3-201ENSMUST00000113457 Neurod1Q60867 357 aa15.18■□□□□ 0.02
Col4a3-201ENSMUST00000113457 Il27Q8K3I6 234 aa15.16■□□□□ 0.02
Col4a3-201ENSMUST00000113457 NefmP08553 848 aa15.14■□□□□ 0.01
Col4a3-201ENSMUST00000113457 Gm13697A2AK42 830 aa15.11■□□□□ 0.01
Col4a3-201ENSMUST00000113457 Dcaf1Q80TR8 1506 aa15.07■□□□□ 0
Col4a3-201ENSMUST00000113457 Eif5bQ05D44 1216 aaKnown RBP15.04■□□□□ -0
Col4a3-201ENSMUST00000113457 DiexfQ8BTT6 772 aaKnown RBP15.03■□□□□ -0
Col4a3-201ENSMUST00000113457 Fam50aQ9WV03 339 aaKnown RBP15.01□□□□□ -0.01
Col4a3-201ENSMUST00000113457 Acin1Q9JIX8 1338 aaKnown RBP14.99□□□□□ -0.01
Col4a3-201ENSMUST00000113457 Chic1Q8CBW7 227 aa14.99□□□□□ -0.01
Col4a3-201ENSMUST00000113457 Rb1cc1Q9ESK9 1588 aa14.97□□□□□ -0.01
Col4a3-201ENSMUST00000113457 NclP09405 707 aaKnown RBP14.94□□□□□ -0.02
Col4a3-201ENSMUST00000113457 Cdk11bP24788 784 aaKnown RBP14.93□□□□□ -0.02
Col4a3-201ENSMUST00000113457 Ap3b1Q9Z1T1 1105 aa14.91□□□□□ -0.02
Col4a3-201ENSMUST00000113457 Brd4Q9ESU6 1400 aaKnown RBP14.91□□□□□ -0.02
Col4a3-201ENSMUST00000113457 Zcchc6Q5BLK4 1491 aaKnown RBP14.87□□□□□ -0.03
Col4a3-201ENSMUST00000113457 Rtl5Q5DTT4 599 aa14.86□□□□□ -0.03
Col4a3-201ENSMUST00000113457 Zbtb7cQ8VCZ7 619 aa14.85□□□□□ -0.03
Col4a3-201ENSMUST00000113457 Atp1b4Q99ME6 356 aa14.85□□□□□ -0.03
Col4a3-201ENSMUST00000113457 NacadQ5SWP3 1504 aa14.81□□□□□ -0.04
Col4a3-201ENSMUST00000113457 Gm13695A2AK44 830 aa14.81□□□□□ -0.04
Col4a3-201ENSMUST00000113457 Plppr3Q7TPB0 716 aa14.79□□□□□ -0.04
Col4a3-201ENSMUST00000113457 Hnrnpul2Q00PI9 745 aaKnown RBP14.78□□□□□ -0.04
Col4a3-201ENSMUST00000113457 Ifnlr1Q8CGK5 535 aa14.77□□□□□ -0.05
Col4a3-201ENSMUST00000113457 Baz1aO88379 1555 aa14.74□□□□□ -0.05
Col4a3-201ENSMUST00000113457 Tnnt3Q9QZ47 272 aa14.74□□□□□ -0.05
Col4a3-201ENSMUST00000113457 Hdac5Q9Z2V6 1113 aa14.69□□□□□ -0.06
Col4a3-201ENSMUST00000113457 CatipB9EKE5 520 aa14.67□□□□□ -0.06
Col4a3-201ENSMUST00000113457 Nlrp6Q91WS2 869 aa14.64□□□□□ -0.07
Col4a3-201ENSMUST00000113457 Erich6D3Z6S9 713 aa14.64□□□□□ -0.07
Col4a3-201ENSMUST00000113457 Polr3glQ8R0C0 218 aa14.62□□□□□ -0.07
Col4a3-201ENSMUST00000113457 Crybg2B7ZCC2 1516 aa14.58□□□□□ -0.08
Col4a3-201ENSMUST00000113457 Prdm10Q3UTQ7 1184 aa14.57□□□□□ -0.08
Col4a3-201ENSMUST00000113457 Pcgf6Q99NA9 353 aa14.56□□□□□ -0.08
Col4a3-201ENSMUST00000113457 Zbtb4Q5F293 982 aa14.54□□□□□ -0.08
Col4a3-201ENSMUST00000113457 Hsp90aa1P07901 733 aaKnown RBP14.52□□□□□ -0.08
Col4a3-201ENSMUST00000113457 Cep164Q5DU05 1446 aa14.51□□□□□ -0.09
Col4a3-201ENSMUST00000113457 Nop58Q6DFW4 536 aaKnown RBP14.5□□□□□ -0.09
Col4a3-201ENSMUST00000113457 DaxxO35613 739 aa14.49□□□□□ -0.09
Col4a3-201ENSMUST00000113457 Ppargc1bQ8VHJ7 1014 aa14.47□□□□□ -0.09
Col4a3-201ENSMUST00000113457 Znf326O88291 580 aa14.45□□□□□ -0.1
Col4a3-201ENSMUST00000113457 ArxO35085 564 aa14.45□□□□□ -0.1
Col4a3-201ENSMUST00000113457 Safb2Q80YR5 991 aaKnown RBP14.38□□□□□ -0.11
Col4a3-201ENSMUST00000113457 TonslQ6NZL6 1363 aa14.38□□□□□ -0.11
Col4a3-201ENSMUST00000113457 Rangap1P46061 589 aaKnown RBP14.35□□□□□ -0.11
Col4a3-201ENSMUST00000113457 Npm1Q61937 292 aaKnown RBP14.35□□□□□ -0.11
Col4a3-201ENSMUST00000113457 Upf2A2AT37 1269 aaKnown RBP14.35□□□□□ -0.11
Col4a3-201ENSMUST00000113457 Ccer2J3QPU5 274 aa14.34□□□□□ -0.11
Col4a3-201ENSMUST00000113457 Smarca2Q6DIC0 1577 aa14.3□□□□□ -0.12
Col4a3-201ENSMUST00000113457 Lmod2Q3UHZ5 550 aa14.28□□□□□ -0.12
Col4a3-201ENSMUST00000113457 Ythdc1E9Q5K9 736 aaKnown RBP14.27□□□□□ -0.13
Col4a3-201ENSMUST00000113457 Lmod3E9QA62 571 aa14.25□□□□□ -0.13
Col4a3-201ENSMUST00000113457 Kdm5dQ62240 1548 aa14.24□□□□□ -0.13
Col4a3-201ENSMUST00000113457 Fkbp15Q6P9Q6 1216 aaKnown RBP14.23□□□□□ -0.13
Col4a3-201ENSMUST00000113457 Ercc6F8VPZ5 1481 aa14.2□□□□□ -0.14
Col4a3-201ENSMUST00000113457 Anp32aO35381 247 aa14.17□□□□□ -0.14
Col4a3-201ENSMUST00000113457 Ccdc18Q640L5 1455 aa14.15□□□□□ -0.14
Col4a3-201ENSMUST00000113457 P3h3Q8CG70 732 aa14.14□□□□□ -0.15
Col4a3-201ENSMUST00000113457 Fgd1P52734 960 aa14.14□□□□□ -0.15
Col4a3-201ENSMUST00000113457 Ccdc9Q8VC31 543 aaKnown RBP14.12□□□□□ -0.15
Col4a3-201ENSMUST00000113457 Cttnbp2B9EJA2 1648 aa14.11□□□□□ -0.15
Col4a3-201ENSMUST00000113457 Golga3P55937 1487 aa14.09□□□□□ -0.15
Col4a3-201ENSMUST00000113457 DekQ7TNV0 380 aaKnown RBP14.08□□□□□ -0.15
Col4a3-201ENSMUST00000113457 Irx6Q9ER75 438 aa14.07□□□□□ -0.16
Col4a3-201ENSMUST00000113457 Rsf1E9PWW9 1441 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 151.4 ms