RNA–Protein interactions for RNA: ENSMUST00000105595.1

Ssu72-202, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

TSL 1 (best) BASIC

Gene Ssu72, Length 874 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72-202ENSMUST00000105595 Igkv4-58A0A0G2JGI6 119 aa10.16□□□□□ -0.78
Ssu72-202ENSMUST00000105595 Gm5767A0A0J9YTU8 78 aa10.16□□□□□ -0.78
Ssu72-202ENSMUST00000105595 5930422O12RikQ8C4Y4 123 aa10.16□□□□□ -0.78
Ssu72-202ENSMUST00000105595 Hbb-bsA8DUK4 147 aa10.15□□□□□ -0.78
Ssu72-202ENSMUST00000105595 Tmem243B2RVB9 118 aa10.15□□□□□ -0.78
Ssu72-202ENSMUST00000105595 Hbb-b1P02088 147 aa10.15□□□□□ -0.78
Ssu72-202ENSMUST00000105595 LorP18165 486 aa10.15□□□□□ -0.78
Ssu72-202ENSMUST00000105595 Xlr5cQ9JJR2 179 aa10.15□□□□□ -0.78
Ssu72-202ENSMUST00000105595 Trappc1Q5NCF2 145 aa10.14□□□□□ -0.79
Ssu72-202ENSMUST00000105595 A930002H24RikQ8C8Y3 163 aa10.14□□□□□ -0.79
Ssu72-202ENSMUST00000105595 Lamtor3O88653 124 aa10.13□□□□□ -0.79
Ssu72-202ENSMUST00000105595 Plscr4P58196 326 aa10.13□□□□□ -0.79
Ssu72-202ENSMUST00000105595 Defb37Q7TMD2 62 aa10.13□□□□□ -0.79
Ssu72-202ENSMUST00000105595 Rps29P62274 56 aa10.12□□□□□ -0.79
Ssu72-202ENSMUST00000105595 Dnal4Q9DCM4 105 aa10.12□□□□□ -0.79
Ssu72-202ENSMUST00000105595 Gnb1lQ9EQ15 326 aa10.12□□□□□ -0.79
Ssu72-202ENSMUST00000105595 A0A286YE02 88 aa10.11□□□□□ -0.79
Ssu72-202ENSMUST00000105595 Cend1Q9JKC6 149 aa10.1□□□□□ -0.79
Ssu72-202ENSMUST00000105595 Vpreb3D3Z6J4 130 aa10.09□□□□□ -0.79
Ssu72-202ENSMUST00000105595 Crct1Q6PAI5 102 aa10.09□□□□□ -0.79
Ssu72-202ENSMUST00000105595 Gm5142Q8C5X9 133 aa10.08□□□□□ -0.8
Ssu72-202ENSMUST00000105595 2310057N15RikQ9D6T8 200 aa10.08□□□□□ -0.8
Ssu72-202ENSMUST00000105595 SelenowP63300 88 aa10.07□□□□□ -0.8
Ssu72-202ENSMUST00000105595 Defb29Q8BGW9 78 aa10.07□□□□□ -0.8
Ssu72-202ENSMUST00000105595 Gm5868Q8BJG1 145 aa10.07□□□□□ -0.8
Ssu72-202ENSMUST00000105595 Gm10061D3Z714 54 aa10.06□□□□□ -0.8
Ssu72-202ENSMUST00000105595 Gm9821Q8K076 103 aa10.06□□□□□ -0.8
Ssu72-202ENSMUST00000105595 Igkv3-4A0A140T8Q4 119 aa10.04□□□□□ -0.8
Ssu72-202ENSMUST00000105595 Smim1P0C8K7 78 aa10.04□□□□□ -0.8
Ssu72-202ENSMUST00000105595 Gm11569B1AQB1 180 aa10.03□□□□□ -0.8
Ssu72-202ENSMUST00000105595 IqcjQ8BPW0 110 aa10.03□□□□□ -0.8
Ssu72-202ENSMUST00000105595 Rnf213E9Q555 5152 aaKnown RBP10.01□□□□□ -0.81
Ssu72-202ENSMUST00000105595 Gm21886J3QJU9 214 aa10□□□□□ -0.81
Ssu72-202ENSMUST00000105595 A830005F24RikQ8BRT5 167 aa10□□□□□ -0.81
Ssu72-202ENSMUST00000105595 Vmn1r197Q8R265 298 aa10□□□□□ -0.81
Ssu72-202ENSMUST00000105595 Ighv10-1A0A0B4J1J6 119 aa9.99□□□□□ -0.81
Ssu72-202ENSMUST00000105595 BC107364E9Q5A2 140 aa9.99□□□□□ -0.81
Ssu72-202ENSMUST00000105595 Gm2310J3QNJ2 377 aa9.99□□□□□ -0.81
Ssu72-202ENSMUST00000105595 Smim26Q3V460 107 aa9.99□□□□□ -0.81
Ssu72-202ENSMUST00000105595 Defb45Q3V490 66 aa9.98□□□□□ -0.81
Ssu72-202ENSMUST00000105595 Eif4ebp3Q80VV3 101 aa9.98□□□□□ -0.81
Ssu72-202ENSMUST00000105595 Lce1gQ9D195 139 aa9.98□□□□□ -0.81
Ssu72-202ENSMUST00000105595 P0C913 63 aa9.97□□□□□ -0.81
Ssu72-202ENSMUST00000105595 Vamp8O70404 101 aa9.96□□□□□ -0.82
Ssu72-202ENSMUST00000105595 H2al1nQ497L1 109 aa9.96□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Gm10401E9Q3K6 71 aa9.95□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Pam16Q9CQV1 125 aa9.95□□□□□ -0.82
Ssu72-202ENSMUST00000105595 S100a1P56565 94 aa9.94□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Uqcc3Q8K2T4 89 aa9.94□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Sec61bQ9CQS8 96 aaKnown RBP9.94□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Syne2Q6ZWQ0 6874 aaKnown RBP9.94□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Gm37389A0A0A6YW05 95 aa9.93□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Rab37Q9JKM7 223 aa9.93□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Cited4Q9WUL8 182 aa9.93□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Igkv8-21A0A140T8P7 120 aa9.91□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Q8BT88 171 aa9.91□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Rpl39lQ9CQD0 51 aa9.91□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Krtap15-1Q9QZU5 150 aa9.91□□□□□ -0.82
Ssu72-202ENSMUST00000105595 Gemin7Q9CWY4 129 aa9.85□□□□□ -0.83
Ssu72-202ENSMUST00000105595 Igkv1-35A0A0G2JDE5 120 aa9.83□□□□□ -0.84
Ssu72-202ENSMUST00000105595 1700018G05RikA0A1B0GSI2 66 aa9.83□□□□□ -0.84
Ssu72-202ENSMUST00000105595 Gm16253D3Z167 63 aa9.83□□□□□ -0.84
Ssu72-202ENSMUST00000105595 Trav3-4A0A075B654 114 aa9.82□□□□□ -0.84
Ssu72-202ENSMUST00000105595 4930535I16RikQ9CUI2 172 aa9.82□□□□□ -0.84
Ssu72-202ENSMUST00000105595 Igkv8-28A0A0G2JE47 121 aa9.81□□□□□ -0.84
Ssu72-202ENSMUST00000105595 A730071L15RikQ8C4X0 137 aa9.81□□□□□ -0.84
Ssu72-202ENSMUST00000105595 Gm16381A0A1Y7VKT9 73 aa9.8□□□□□ -0.84
Ssu72-202ENSMUST00000105595 P06320 134 aa9.8□□□□□ -0.84
Ssu72-202ENSMUST00000105595 CckP09240 115 aa9.8□□□□□ -0.84
Ssu72-202ENSMUST00000105595 Tal2Q62282 108 aa9.8□□□□□ -0.84
Ssu72-202ENSMUST00000105595 Igkv2-109A0A075B5K6 120 aa9.79□□□□□ -0.84
Ssu72-202ENSMUST00000105595 Gm11939A2A592 99 aa9.78□□□□□ -0.84
Ssu72-202ENSMUST00000105595 G0s2Q61585 103 aa9.78□□□□□ -0.84
Ssu72-202ENSMUST00000105595 Chchd10Q7TNL9 138 aa9.78□□□□□ -0.84
Ssu72-202ENSMUST00000105595 Grcc10O35127 126 aa9.76□□□□□ -0.85
Ssu72-202ENSMUST00000105595 Sigmar1O55242 223 aa9.75□□□□□ -0.85
Ssu72-202ENSMUST00000105595 Tma7Q8K003 64 aaKnown RBP9.74□□□□□ -0.85
Ssu72-202ENSMUST00000105595 1700020N15RikL7MTX3 112 aa9.73□□□□□ -0.85
Ssu72-202ENSMUST00000105595 Sfta2E9PXB6 77 aa9.72□□□□□ -0.85
Ssu72-202ENSMUST00000105595 Vps25Q9CQ80 176 aa9.7□□□□□ -0.86
Ssu72-202ENSMUST00000105595 Ctxnd2A0A1B0GQX3 59 aa9.69□□□□□ -0.86
Ssu72-202ENSMUST00000105595 Cox6a2P43023 97 aa9.69□□□□□ -0.86
Ssu72-202ENSMUST00000105595 9530003J23RikQ8BM26 151 aa9.68□□□□□ -0.86
Ssu72-202ENSMUST00000105595 1700042G07RikB1AUF7 90 aa9.67□□□□□ -0.86
Ssu72-202ENSMUST00000105595 2310034C09RikQ9D746 214 aa9.67□□□□□ -0.86
Ssu72-202ENSMUST00000105595 Gm11563B1AQ90 168 aa9.66□□□□□ -0.86
Ssu72-202ENSMUST00000105595 Krtap4-7Q9D732 168 aa9.66□□□□□ -0.86
Ssu72-202ENSMUST00000105595 Ifitm6A0A1B0GS75 124 aa9.65□□□□□ -0.86
Ssu72-202ENSMUST00000105595 Tac4Q99N14 128 aa9.65□□□□□ -0.86
Ssu72-202ENSMUST00000105595 Gm29423A0A087WRM1 55 aa9.64□□□□□ -0.87
Ssu72-202ENSMUST00000105595 Gm11555B1AQ89 175 aa9.64□□□□□ -0.87
Ssu72-202ENSMUST00000105595 Defb47Q30KN1 79 aa9.64□□□□□ -0.87
Ssu72-202ENSMUST00000105595 Igkv8-30A0A140T8M3 121 aa9.62□□□□□ -0.87
Ssu72-202ENSMUST00000105595 Gm26620Q9CY65 116 aa9.62□□□□□ -0.87
Ssu72-202ENSMUST00000105595 Rpl37Q9D823 97 aa9.62□□□□□ -0.87
Ssu72-202ENSMUST00000105595 Ighv10-3A0A075B5T6 119 aa9.6□□□□□ -0.87
Ssu72-202ENSMUST00000105595 Gm10318A0A1W2P728 225 aa9.6□□□□□ -0.87
Ssu72-202ENSMUST00000105595 Gm12353A2AGJ4 60 aa9.6□□□□□ -0.87
Ssu72-202ENSMUST00000105595 P01843 105 aa9.58□□□□□ -0.88
Ssu72-202ENSMUST00000105595 Cypt15B1AXS0 87 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 86.4 ms