RNA–Protein interactions for RNA: ENSMUST00000098441.9

Col6a6-202, Transcript of Collagen alpha-6(VI) chain, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Col6a6, Length 8,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-202ENSMUST00000098441 Cypt14J3QPF7 87 aa7.23□□□□□ -1.25
Col6a6-202ENSMUST00000098441 Gm3880A0A1B0GSB3 72 aa7.22□□□□□ -1.25
Col6a6-202ENSMUST00000098441 Fam104aA2A6P4 185 aa7.22□□□□□ -1.25
Col6a6-202ENSMUST00000098441 Gm9821Q8K076 103 aa7.22□□□□□ -1.25
Col6a6-202ENSMUST00000098441 Defb9Q8R2I6 67 aa7.2□□□□□ -1.26
Col6a6-202ENSMUST00000098441 Spink7Q6IE32 76 aa7.19□□□□□ -1.26
Col6a6-202ENSMUST00000098441 Bod1lE9Q6J5 3032 aa7.17□□□□□ -1.26
Col6a6-202ENSMUST00000098441 C530025M09RikF6RGA8 229 aa7.17□□□□□ -1.26
Col6a6-202ENSMUST00000098441 KalrnA2CG49 2964 aa7.16□□□□□ -1.26
Col6a6-202ENSMUST00000098441 DspE9Q557 2883 aaKnown RBP7.16□□□□□ -1.26
Col6a6-202ENSMUST00000098441 6030445D17RikE9Q8F9 148 aa7.14□□□□□ -1.27
Col6a6-202ENSMUST00000098441 Fam229bQ8CF36 80 aa7.13□□□□□ -1.27
Col6a6-202ENSMUST00000098441 Dmxl1Q6PNC0 3013 aa7.12□□□□□ -1.27
Col6a6-202ENSMUST00000098441 FrylF8VQ05 3007 aa7.11□□□□□ -1.27
Col6a6-202ENSMUST00000098441 Muc2Q80Z19 2680 aa7.09□□□□□ -1.27
Col6a6-202ENSMUST00000098441 Smim29Q8R043 75 aa7.09□□□□□ -1.28
Col6a6-202ENSMUST00000098441 UtrnE9Q6R7 3430 aa7.09□□□□□ -1.28
Col6a6-202ENSMUST00000098441 OxtP35454 125 aa7.08□□□□□ -1.28
Col6a6-202ENSMUST00000098441 Gm3646F6S692 53 aa7.07□□□□□ -1.28
Col6a6-202ENSMUST00000098441 Ranbp2Q9ERU9 3053 aaKnown RBP7.07□□□□□ -1.28
Col6a6-202ENSMUST00000098441 Gm10065F6TJM2 114 aa7.07□□□□□ -1.28
Col6a6-202ENSMUST00000098441 Anapc11Q9CPX9 84 aa7.07□□□□□ -1.28
Col6a6-202ENSMUST00000098441 1700042G07RikB1AUF7 90 aa7.06□□□□□ -1.28
Col6a6-202ENSMUST00000098441 Fbn2Q61555 2907 aa7.06□□□□□ -1.28
Col6a6-202ENSMUST00000098441 Zzef1Q5SSH7 2924 aa7.04□□□□□ -1.28
Col6a6-202ENSMUST00000098441 MgaA2AWL7 3003 aaKnown RBP7.04□□□□□ -1.28
Col6a6-202ENSMUST00000098441 Gm4491E0CX42 125 aa7.03□□□□□ -1.28
Col6a6-202ENSMUST00000098441 TrioQ0KL02 3102 aa7.02□□□□□ -1.29
Col6a6-202ENSMUST00000098441 NbdyA0A0N4SUI7 68 aa7.01□□□□□ -1.29
Col6a6-202ENSMUST00000098441 Plac8Q9JI48 112 aa7.01□□□□□ -1.29
Col6a6-202ENSMUST00000098441 Hivep1Q03172 2688 aa7□□□□□ -1.29
Col6a6-202ENSMUST00000098441 Romo1P60603 79 aa7□□□□□ -1.29
Col6a6-202ENSMUST00000098441 Srrm2Q8BTI8 2703 aaKnown RBP6.98□□□□□ -1.29
Col6a6-202ENSMUST00000098441 Odf3bQ5M8M2 238 aa6.98□□□□□ -1.29
Col6a6-202ENSMUST00000098441 Vps13aQ5H8C4 3166 aa6.96□□□□□ -1.29
Col6a6-202ENSMUST00000098441 Sec61bQ9CQS8 96 aaKnown RBP6.96□□□□□ -1.29
Col6a6-202ENSMUST00000098441 FlncQ8VHX6 2726 aaKnown RBP6.96□□□□□ -1.3
Col6a6-202ENSMUST00000098441 Gm37013Q8K491 104 aa6.96□□□□□ -1.3
Col6a6-202ENSMUST00000098441 FcgbpE9Q0B5 2583 aa6.95□□□□□ -1.3
Col6a6-202ENSMUST00000098441 Gm3285A0A1W2P7U0 201 aa6.95□□□□□ -1.3
Col6a6-202ENSMUST00000098441 Rpl37Q9D823 97 aa6.95□□□□□ -1.3
Col6a6-202ENSMUST00000098441 Fam229aB2KGE5 128 aa6.95□□□□□ -1.3
Col6a6-202ENSMUST00000098441 FryE9Q8I9 3020 aa6.92□□□□□ -1.3
Col6a6-202ENSMUST00000098441 Gm7173A0A0G2JEB6 3132 aa6.92□□□□□ -1.3
Col6a6-202ENSMUST00000098441 Chd7A2AJK6 2986 aaKnown RBP6.91□□□□□ -1.3
Col6a6-202ENSMUST00000098441 Cfap54Q8C6S9 3106 aa6.9□□□□□ -1.3
Col6a6-202ENSMUST00000098441 Igfn1Q3KNY0 2849 aa6.89□□□□□ -1.31
Col6a6-202ENSMUST00000098441 Nf1Q04690 2841 aa6.87□□□□□ -1.31
Col6a6-202ENSMUST00000098441 BptfA2A654 3036 aaKnown RBP6.86□□□□□ -1.31
Col6a6-202ENSMUST00000098441 Gm10139O88245 57 aa6.86□□□□□ -1.31
Col6a6-202ENSMUST00000098441 Lama3Q61789 3330 aa6.86□□□□□ -1.31
Col6a6-202ENSMUST00000098441 Gm10382Q3V0T5 144 aa6.85□□□□□ -1.31
Col6a6-202ENSMUST00000098441 Myo15bI7HPW8 3033 aa6.84□□□□□ -1.31
Col6a6-202ENSMUST00000098441 Gm10320E9PW43 113 aa6.84□□□□□ -1.31
Col6a6-202ENSMUST00000098441 Ndufaf8A2AMZ4 74 aa6.83□□□□□ -1.32
Col6a6-202ENSMUST00000098441 4933415A04RikQ9D443 101 aa6.83□□□□□ -1.32
Col6a6-202ENSMUST00000098441 Gm16253D3Z167 63 aa6.83□□□□□ -1.32
Col6a6-202ENSMUST00000098441 Rev3lQ61493 3122 aa6.83□□□□□ -1.32
Col6a6-202ENSMUST00000098441 TgO08710 2766 aa6.83□□□□□ -1.32
Col6a6-202ENSMUST00000098441 Chd9Q8BYH8 2885 aa6.82□□□□□ -1.32
Col6a6-202ENSMUST00000098441 Mki67E9PVX6 3177 aaKnown RBP6.82□□□□□ -1.32
Col6a6-202ENSMUST00000098441 Cystm1Q8K353 104 aa6.82□□□□□ -1.32
Col6a6-202ENSMUST00000098441 Gm3250E9Q1M3 230 aa6.81□□□□□ -1.32
Col6a6-202ENSMUST00000098441 Tenm1Q9WTS4 2731 aa6.8□□□□□ -1.32
Col6a6-202ENSMUST00000098441 Pdzd2E9Q1M1 2796 aa6.79□□□□□ -1.32
Col6a6-202ENSMUST00000098441 BC029722A0A0N4SW31 51 aa6.79□□□□□ -1.32
Col6a6-202ENSMUST00000098441 Unc80Q8BLN6 3261 aa6.77□□□□□ -1.33
Col6a6-202ENSMUST00000098441 Krtap15-1Q9QZU5 150 aa6.77□□□□□ -1.33
Col6a6-202ENSMUST00000098441 Cox6b2Q80ZN9 88 aa6.77□□□□□ -1.33
Col6a6-202ENSMUST00000098441 AtmQ62388 3066 aa6.76□□□□□ -1.33
Col6a6-202ENSMUST00000098441 A730071L15RikQ8C4X0 137 aa6.75□□□□□ -1.33
Col6a6-202ENSMUST00000098441 Frem2Q6NVD0 3160 aa6.75□□□□□ -1.33
Col6a6-202ENSMUST00000098441 Sprr1aQ62266 144 aa6.75□□□□□ -1.33
Col6a6-202ENSMUST00000098441 Lama1P19137 3084 aa6.73□□□□□ -1.33
Col6a6-202ENSMUST00000098441 Gm9112A2AI92 75 aa6.73□□□□□ -1.33
Col6a6-202ENSMUST00000098441 Usp34Q6ZQ93 3582 aa6.72□□□□□ -1.33
Col6a6-202ENSMUST00000098441 Wdfy4E9Q2M9 3149 aa6.72□□□□□ -1.33
Col6a6-202ENSMUST00000098441 Trank1Q8BV79 2999 aa6.71□□□□□ -1.34
Col6a6-202ENSMUST00000098441 Gm19426M0QWC7 77 aa6.7□□□□□ -1.34
Col6a6-202ENSMUST00000098441 LrbaQ9ESE1 2856 aa6.69□□□□□ -1.34
Col6a6-202ENSMUST00000098441 Dmxl2Q8BPN8 3032 aa6.67□□□□□ -1.34
Col6a6-202ENSMUST00000098441 Celsr2Q9R0M0 2920 aa6.67□□□□□ -1.34
Col6a6-202ENSMUST00000098441 NbeaQ9EPN1 2936 aa6.67□□□□□ -1.34
Col6a6-202ENSMUST00000098441 AspmQ8CJ27 3122 aa6.66□□□□□ -1.34
Col6a6-202ENSMUST00000098441 Gm11565A2A4M7 156 aa6.66□□□□□ -1.34
Col6a6-202ENSMUST00000098441 Gm5767A0A0J9YTU8 78 aa6.65□□□□□ -1.34
Col6a6-202ENSMUST00000098441 HttP42859 3119 aa6.63□□□□□ -1.35
Col6a6-202ENSMUST00000098441 Krtap29-1A2A5X4 342 aa6.61□□□□□ -1.35
Col6a6-202ENSMUST00000098441 Celsr1O35161 3034 aa6.6□□□□□ -1.35
Col6a6-202ENSMUST00000098441 Col12a1Q60847 3120 aa6.59□□□□□ -1.35
Col6a6-202ENSMUST00000098441 SmcpP15265 143 aa6.57□□□□□ -1.36
Col6a6-202ENSMUST00000098441 2310050C09RikG5E8Z3 280 aa6.55□□□□□ -1.36
Col6a6-202ENSMUST00000098441 Gm40193A0A1B0GT39 78 aa6.54□□□□□ -1.36
Col6a6-202ENSMUST00000098441 Rps29P62274 56 aa6.54□□□□□ -1.36
Col6a6-202ENSMUST00000098441 Tenm3Q9WTS6 2715 aa6.54□□□□□ -1.36
Col6a6-202ENSMUST00000098441 Gm2310J3QNJ2 377 aa6.49□□□□□ -1.37
Col6a6-202ENSMUST00000098441 Celsr3Q91ZI0 3301 aa6.46□□□□□ -1.38
Col6a6-202ENSMUST00000098441 Gm21887J3QQ04 176 aa6.44□□□□□ -1.38
Col6a6-202ENSMUST00000098441 Gm3233E9Q2H5 230 aa6.44□□□□□ -1.38
Col6a6-202ENSMUST00000098441 Lrrc37aB1AWG4 3215 aa6.42□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 58.3 ms