RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Anapc11Q9CPX9 84 aa9.23□□□□□ -0.93
Col2a1-202ENSMUST00000088355 Zcchc13Q9D548 170 aa9.22□□□□□ -0.93
Col2a1-202ENSMUST00000088355 Ranbp2Q9ERU9 3053 aaKnown RBP9.22□□□□□ -0.93
Col2a1-202ENSMUST00000088355 A330070K13RikQ8CA53 115 aa9.22□□□□□ -0.93
Col2a1-202ENSMUST00000088355 9530053A07RikE9PVG8 2581 aa9.22□□□□□ -0.93
Col2a1-202ENSMUST00000088355 Gm12216A0A1W2P827 62 aa9.2□□□□□ -0.94
Col2a1-202ENSMUST00000088355 7530416G11RikJ3QJX6 159 aa9.2□□□□□ -0.94
Col2a1-202ENSMUST00000088355 Tep1P97499 2629 aa9.19□□□□□ -0.94
Col2a1-202ENSMUST00000088355 Muc2Q80Z19 2680 aa9.19□□□□□ -0.94
Col2a1-202ENSMUST00000088355 Cypt15B1AXS0 87 aa9.19□□□□□ -0.94
Col2a1-202ENSMUST00000088355 Gm20661K7N787 53 aa9.18□□□□□ -0.94
Col2a1-202ENSMUST00000088355 Fam104aA2A6P4 185 aa9.17□□□□□ -0.94
Col2a1-202ENSMUST00000088355 Pkd1l1Q8R526 2615 aa9.17□□□□□ -0.94
Col2a1-202ENSMUST00000088355 Unc80Q8BLN6 3261 aa9.16□□□□□ -0.94
Col2a1-202ENSMUST00000088355 Col6a5A6H584 2640 aa9.15□□□□□ -0.95
Col2a1-202ENSMUST00000088355 Rps28P62858 69 aaKnown RBP9.15□□□□□ -0.95
Col2a1-202ENSMUST00000088355 Coa5Q99M07 74 aa9.13□□□□□ -0.95
Col2a1-202ENSMUST00000088355 Nbeal2Q6ZQA0 2742 aa9.13□□□□□ -0.95
Col2a1-202ENSMUST00000088355 Gm10065F6TJM2 114 aa9.12□□□□□ -0.95
Col2a1-202ENSMUST00000088355 Lrrc37aB1AWG4 3215 aa9.1□□□□□ -0.95
Col2a1-202ENSMUST00000088355 Gm26620Q9CY65 116 aa9.09□□□□□ -0.95
Col2a1-202ENSMUST00000088355 Stab2Q8R4U0 2559 aa9.08□□□□□ -0.96
Col2a1-202ENSMUST00000088355 NbdyA0A0N4SUI7 68 aa9.07□□□□□ -0.96
Col2a1-202ENSMUST00000088355 Cdc42se1Q8BHL7 80 aa9.07□□□□□ -0.96
Col2a1-202ENSMUST00000088355 Prr13Q9CQJ5 137 aa9.05□□□□□ -0.96
Col2a1-202ENSMUST00000088355 Smim29Q8R043 75 aa9.04□□□□□ -0.96
Col2a1-202ENSMUST00000088355 Cypt14J3QPF7 87 aa9.02□□□□□ -0.96
Col2a1-202ENSMUST00000088355 Gm17349F7BGH6 99 aa9□□□□□ -0.97
Col2a1-202ENSMUST00000088355 Celsr1O35161 3034 aa9□□□□□ -0.97
Col2a1-202ENSMUST00000088355 Hivep1Q03172 2688 aa8.99□□□□□ -0.97
Col2a1-202ENSMUST00000088355 Rnase13Q5GAM7 153 aa8.99□□□□□ -0.97
Col2a1-202ENSMUST00000088355 Phxr4P15974 95 aa8.97□□□□□ -0.97
Col2a1-202ENSMUST00000088355 Chtf8P0CG14 533 aa8.95□□□□□ -0.98
Col2a1-202ENSMUST00000088355 Gm36176A0A1W2P8D5 158 aa8.94□□□□□ -0.98
Col2a1-202ENSMUST00000088355 Gm9821Q8K076 103 aa8.93□□□□□ -0.98
Col2a1-202ENSMUST00000088355 Frem2Q6NVD0 3160 aa8.91□□□□□ -0.98
Col2a1-202ENSMUST00000088355 Uqcr11Q9CPX8 56 aa8.9□□□□□ -0.98
Col2a1-202ENSMUST00000088355 BptfA2A654 3036 aaKnown RBP8.9□□□□□ -0.98
Col2a1-202ENSMUST00000088355 FrylF8VQ05 3007 aa8.9□□□□□ -0.98
Col2a1-202ENSMUST00000088355 Fam229bQ8CF36 80 aa8.9□□□□□ -0.99
Col2a1-202ENSMUST00000088355 Tex15F8VPN2 2785 aa8.89□□□□□ -0.99
Col2a1-202ENSMUST00000088355 Col6a3E9PWQ3 3284 aa8.88□□□□□ -0.99
Col2a1-202ENSMUST00000088355 Gm10320E9PW43 113 aa8.87□□□□□ -0.99
Col2a1-202ENSMUST00000088355 2310034C09RikQ9D746 214 aa8.86□□□□□ -0.99
Col2a1-202ENSMUST00000088355 Lama1P19137 3084 aa8.86□□□□□ -0.99
Col2a1-202ENSMUST00000088355 Mp68P56379 58 aa8.86□□□□□ -0.99
Col2a1-202ENSMUST00000088355 Gm9508A0A1W2P7W0 230 aa8.84□□□□□ -0.99
Col2a1-202ENSMUST00000088355 Sprr1aQ62266 144 aa8.84□□□□□ -0.99
Col2a1-202ENSMUST00000088355 FryE9Q8I9 3020 aa8.83□□□□□ -1
Col2a1-202ENSMUST00000088355 Celsr3Q91ZI0 3301 aa8.82□□□□□ -1
Col2a1-202ENSMUST00000088355 NbeaQ9EPN1 2936 aa8.82□□□□□ -1
Col2a1-202ENSMUST00000088355 Wdfy4E9Q2M9 3149 aa8.81□□□□□ -1
Col2a1-202ENSMUST00000088355 Brca2P97929 3329 aa8.81□□□□□ -1
Col2a1-202ENSMUST00000088355 6030445D17RikE9Q8F9 148 aa8.79□□□□□ -1
Col2a1-202ENSMUST00000088355 Odf3bQ5M8M2 238 aa8.79□□□□□ -1
Col2a1-202ENSMUST00000088355 Dmxl2Q8BPN8 3032 aa8.78□□□□□ -1
Col2a1-202ENSMUST00000088355 Gm10139O88245 57 aa8.78□□□□□ -1
Col2a1-202ENSMUST00000088355 Gm21798J3QNU5 87 aa8.77□□□□□ -1.01
Col2a1-202ENSMUST00000088355 Gm10643Q3URG9 111 aa8.76□□□□□ -1.01
Col2a1-202ENSMUST00000088355 Utp20Q5XG71 2788 aaKnown RBP8.75□□□□□ -1.01
Col2a1-202ENSMUST00000088355 Adgrg4B7ZCC9 3073 aa8.75□□□□□ -1.01
Col2a1-202ENSMUST00000088355 DspE9Q557 2883 aaKnown RBP8.75□□□□□ -1.01
Col2a1-202ENSMUST00000088355 Itpr2Q9Z329 2701 aa8.72□□□□□ -1.01
Col2a1-202ENSMUST00000088355 FlncQ8VHX6 2726 aaKnown RBP8.7□□□□□ -1.02
Col2a1-202ENSMUST00000088355 VcanQ62059 3357 aa8.69□□□□□ -1.02
Col2a1-202ENSMUST00000088355 FcgbpE9Q0B5 2583 aa8.67□□□□□ -1.02
Col2a1-202ENSMUST00000088355 Igfn1Q3KNY0 2849 aa8.66□□□□□ -1.02
Col2a1-202ENSMUST00000088355 Dchs2A0A0A6YW72 3346 aa8.66□□□□□ -1.02
Col2a1-202ENSMUST00000088355 Gm4491E0CX42 125 aa8.65□□□□□ -1.02
Col2a1-202ENSMUST00000088355 Krtap29-1A2A5X4 342 aa8.63□□□□□ -1.03
Col2a1-202ENSMUST00000088355 Gm16253D3Z167 63 aa8.63□□□□□ -1.03
Col2a1-202ENSMUST00000088355 Krtap15-1Q9QZU5 150 aa8.63□□□□□ -1.03
Col2a1-202ENSMUST00000088355 Zzef1Q5SSH7 2924 aa8.6□□□□□ -1.03
Col2a1-202ENSMUST00000088355 Spink7Q6IE32 76 aa8.59□□□□□ -1.03
Col2a1-202ENSMUST00000088355 Celsr2Q9R0M0 2920 aa8.57□□□□□ -1.04
Col2a1-202ENSMUST00000088355 Pla2g10Q9QXX3 151 aa8.56□□□□□ -1.04
Col2a1-202ENSMUST00000088355 A730071L15RikQ8C4X0 137 aa8.55□□□□□ -1.04
Col2a1-202ENSMUST00000088355 Cystm1Q8K353 104 aa8.55□□□□□ -1.04
Col2a1-202ENSMUST00000088355 Krtap13O88375 197 aa8.55□□□□□ -1.04
Col2a1-202ENSMUST00000088355 Sec61bQ9CQS8 96 aaKnown RBP8.55□□□□□ -1.04
Col2a1-202ENSMUST00000088355 Fam229aB2KGE5 128 aa8.55□□□□□ -1.04
Col2a1-202ENSMUST00000088355 Chd9Q8BYH8 2885 aa8.54□□□□□ -1.04
Col2a1-202ENSMUST00000088355 Gm9955Q8CEJ8 102 aa8.54□□□□□ -1.04
Col2a1-202ENSMUST00000088355 Gm9507D3Z5T3 223 aa8.53□□□□□ -1.04
Col2a1-202ENSMUST00000088355 2310050C09RikG5E8Z3 280 aa8.53□□□□□ -1.04
Col2a1-202ENSMUST00000088355 Gm20538F6Z9R1 75 aa8.52□□□□□ -1.04
Col2a1-202ENSMUST00000088355 Gm3880A0A1B0GSB3 72 aa8.52□□□□□ -1.05
Col2a1-202ENSMUST00000088355 CriptO70333 101 aa8.51□□□□□ -1.05
Col2a1-202ENSMUST00000088355 Dchs1E9PVD3 3291 aa8.49□□□□□ -1.05
Col2a1-202ENSMUST00000088355 2310061N02RikQ9D6S9 174 aa8.47□□□□□ -1.05
Col2a1-202ENSMUST00000088355 Gm5767A0A0J9YTU8 78 aa8.46□□□□□ -1.06
Col2a1-202ENSMUST00000088355 Tenm4Q3UHK6 2771 aa8.45□□□□□ -1.06
Col2a1-202ENSMUST00000088355 Gm37013Q8K491 104 aa8.44□□□□□ -1.06
Col2a1-202ENSMUST00000088355 Trank1Q8BV79 2999 aa8.43□□□□□ -1.06
Col2a1-202ENSMUST00000088355 Wdfy3Q6VNB8 3508 aa8.42□□□□□ -1.06
Col2a1-202ENSMUST00000088355 Krtap10-4Q08EG8 221 aa8.42□□□□□ -1.06
Col2a1-202ENSMUST00000088355 Nf1Q04690 2841 aa8.4□□□□□ -1.07
Col2a1-202ENSMUST00000088355 SpegQ62407 3262 aa8.4□□□□□ -1.07
Col2a1-202ENSMUST00000088355 Srrm2Q8BTI8 2703 aaKnown RBP8.36□□□□□ -1.07
Col2a1-202ENSMUST00000088355 Krtap14O08640 167 aa8.34□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 89.6 ms