RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Zcchc13Q9D548 170 aa5.95□□□□□ -1.46
Prpf40a-201ENSMUST00000076313 Cystm1Q8K353 104 aa5.95□□□□□ -1.46
Prpf40a-201ENSMUST00000076313 AtmQ62388 3066 aa5.94□□□□□ -1.46
Prpf40a-201ENSMUST00000076313 Fn1P11276 2477 aaKnown RBP5.92□□□□□ -1.46
Prpf40a-201ENSMUST00000076313 Gm26620Q9CY65 116 aa5.92□□□□□ -1.46
Prpf40a-201ENSMUST00000076313 Tnrc18Q80WC3 2878 aa5.91□□□□□ -1.46
Prpf40a-201ENSMUST00000076313 Ash1lQ99MY8 2958 aa5.91□□□□□ -1.46
Prpf40a-201ENSMUST00000076313 6030445D17RikE9Q8F9 148 aa5.91□□□□□ -1.46
Prpf40a-201ENSMUST00000076313 Itpr1P11881 2749 aa5.9□□□□□ -1.46
Prpf40a-201ENSMUST00000076313 Gm3880A0A1B0GSB3 72 aa5.9□□□□□ -1.47
Prpf40a-201ENSMUST00000076313 Dmxl1Q6PNC0 3013 aa5.89□□□□□ -1.47
Prpf40a-201ENSMUST00000076313 Notch1Q01705 2531 aa5.89□□□□□ -1.47
Prpf40a-201ENSMUST00000076313 Cypt14J3QPF7 87 aa5.88□□□□□ -1.47
Prpf40a-201ENSMUST00000076313 MgaA2AWL7 3003 aaKnown RBP5.87□□□□□ -1.47
Prpf40a-201ENSMUST00000076313 Akap13E9Q394 2776 aa5.87□□□□□ -1.47
Prpf40a-201ENSMUST00000076313 Fbn2Q61555 2907 aa5.87□□□□□ -1.47
Prpf40a-201ENSMUST00000076313 CriptO70333 101 aa5.87□□□□□ -1.47
Prpf40a-201ENSMUST00000076313 Szt2A2A9C3 3431 aa5.85□□□□□ -1.47
Prpf40a-201ENSMUST00000076313 Myo15bI7HPW8 3033 aa5.83□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 NbdyA0A0N4SUI7 68 aa5.83□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 Stab1Q8R4Y4 2571 aa5.82□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 KalrnA2CG49 2964 aa5.82□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 Unc80Q8BLN6 3261 aa5.81□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 AspmQ8CJ27 3122 aa5.81□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 BptfA2A654 3036 aaKnown RBP5.8□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 Gm4491E0CX42 125 aa5.8□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 Celsr3Q91ZI0 3301 aa5.8□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 Gm20538F6Z9R1 75 aa5.79□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 A730071L15RikQ8C4X0 137 aa5.79□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 Gm9955Q8CEJ8 102 aa5.79□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 Gm9508A0A1W2P7W0 230 aa5.79□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 Gm10065F6TJM2 114 aa5.79□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 Gm36176A0A1W2P8D5 158 aa5.78□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 Pla2g10Q9QXX3 151 aa5.78□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 OxtP35454 125 aa5.78□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 Gm10139O88245 57 aa5.78□□□□□ -1.48
Prpf40a-201ENSMUST00000076313 Frem2Q6NVD0 3160 aa5.77□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 Ubr5Q80TP3 2792 aa5.77□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 Odf3bQ5M8M2 238 aa5.76□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 Lrrc37aB1AWG4 3215 aa5.75□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 Mast4Q811L6 2618 aa5.75□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 Gm11565A2A4M7 156 aa5.75□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 Gm37013Q8K491 104 aa5.74□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 NipblQ6KCD5 2798 aaKnown RBP5.74□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 Gm3646F6S692 53 aa5.74□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 Sprr1aQ62266 144 aa5.73□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 Itpr3P70227 2670 aa5.73□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 Gm9821Q8K076 103 aa5.72□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 Celsr1O35161 3034 aa5.72□□□□□ -1.49
Prpf40a-201ENSMUST00000076313 Chd6A3KFM7 2711 aa5.7□□□□□ -1.5
Prpf40a-201ENSMUST00000076313 Spink7Q6IE32 76 aa5.7□□□□□ -1.5
Prpf40a-201ENSMUST00000076313 Gm17349F7BGH6 99 aa5.68□□□□□ -1.5
Prpf40a-201ENSMUST00000076313 Col6a3E9PWQ3 3284 aa5.68□□□□□ -1.5
Prpf40a-201ENSMUST00000076313 Brca2P97929 3329 aa5.68□□□□□ -1.5
Prpf40a-201ENSMUST00000076313 Igsf10Q3V1M1 2594 aa5.67□□□□□ -1.5
Prpf40a-201ENSMUST00000076313 Nbeal2Q6ZQA0 2742 aa5.66□□□□□ -1.5
Prpf40a-201ENSMUST00000076313 Gm16253D3Z167 63 aa5.65□□□□□ -1.51
Prpf40a-201ENSMUST00000076313 Krtap15-1Q9QZU5 150 aa5.64□□□□□ -1.51
Prpf40a-201ENSMUST00000076313 Lama1P19137 3084 aa5.63□□□□□ -1.51
Prpf40a-201ENSMUST00000076313 FrylF8VQ05 3007 aa5.63□□□□□ -1.51
Prpf40a-201ENSMUST00000076313 4933415A04RikQ9D443 101 aa5.6□□□□□ -1.51
Prpf40a-201ENSMUST00000076313 Muc2Q80Z19 2680 aa5.59□□□□□ -1.51
Prpf40a-201ENSMUST00000076313 SmcpP15265 143 aa5.59□□□□□ -1.51
Prpf40a-201ENSMUST00000076313 9530053A07RikE9PVG8 2581 aa5.59□□□□□ -1.52
Prpf40a-201ENSMUST00000076313 Tep1P97499 2629 aa5.58□□□□□ -1.52
Prpf40a-201ENSMUST00000076313 1700042G07RikB1AUF7 90 aa5.57□□□□□ -1.52
Prpf40a-201ENSMUST00000076313 Gm9507D3Z5T3 223 aa5.55□□□□□ -1.52
Prpf40a-201ENSMUST00000076313 Adgrg4B7ZCC9 3073 aa5.55□□□□□ -1.52
Prpf40a-201ENSMUST00000076313 Pkd1l1Q8R526 2615 aa5.55□□□□□ -1.52
Prpf40a-201ENSMUST00000076313 Krtap29-1A2A5X4 342 aa5.54□□□□□ -1.52
Prpf40a-201ENSMUST00000076313 FryE9Q8I9 3020 aa5.54□□□□□ -1.52
Prpf40a-201ENSMUST00000076313 Dchs2A0A0A6YW72 3346 aa5.54□□□□□ -1.52
Prpf40a-201ENSMUST00000076313 DspE9Q557 2883 aaKnown RBP5.53□□□□□ -1.52
Prpf40a-201ENSMUST00000076313 Romo1P60603 79 aa5.53□□□□□ -1.52
Prpf40a-201ENSMUST00000076313 Col6a5A6H584 2640 aa5.53□□□□□ -1.52
Prpf40a-201ENSMUST00000076313 Rpl37Q9D823 97 aa5.52□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 Wdfy4E9Q2M9 3149 aa5.52□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 VcanQ62059 3357 aa5.51□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 Camk2n1Q6QWF9 78 aa5.51□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 Krtap13O88375 197 aa5.5□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 Dchs1E9PVD3 3291 aa5.5□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 Dmxl2Q8BPN8 3032 aa5.49□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 Krtap10-4Q08EG8 221 aa5.49□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 2310050C09RikG5E8Z3 280 aa5.49□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 Stab2Q8R4U0 2559 aa5.49□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 Utp20Q5XG71 2788 aaKnown RBP5.47□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 NbeaQ9EPN1 2936 aa5.47□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 Gm2310J3QNJ2 377 aa5.47□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 Gm10382Q3V0T5 144 aa5.47□□□□□ -1.53
Prpf40a-201ENSMUST00000076313 Hivep1Q03172 2688 aa5.46□□□□□ -1.54
Prpf40a-201ENSMUST00000076313 Myo15aQ9QZZ4 3511 aa5.44□□□□□ -1.54
Prpf40a-201ENSMUST00000076313 Fam229aB2KGE5 128 aa5.44□□□□□ -1.54
Prpf40a-201ENSMUST00000076313 Gm5767A0A0J9YTU8 78 aa5.44□□□□□ -1.54
Prpf40a-201ENSMUST00000076313 ApcQ61315 2845 aa5.44□□□□□ -1.54
Prpf40a-201ENSMUST00000076313 Zfhx3Q61329 3726 aa5.43□□□□□ -1.54
Prpf40a-201ENSMUST00000076313 Tex15F8VPN2 2785 aa5.42□□□□□ -1.54
Prpf40a-201ENSMUST00000076313 Krtap10-10A0A1W2P7T6 217 aa5.41□□□□□ -1.54
Prpf40a-201ENSMUST00000076313 Itpr2Q9Z329 2701 aa5.4□□□□□ -1.55
Prpf40a-201ENSMUST00000076313 Zzef1Q5SSH7 2924 aa5.4□□□□□ -1.55
Prpf40a-201ENSMUST00000076313 BC029722A0A0N4SW31 51 aa5.38□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 77.9 ms