RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Gm9955Q8CEJ8 102 aa7.86□□□□□ -1.15
Ccdc88c-201ENSMUST00000068411 NbdyA0A0N4SUI7 68 aa7.86□□□□□ -1.15
Ccdc88c-201ENSMUST00000068411 Akap13E9Q394 2776 aa7.86□□□□□ -1.15
Ccdc88c-201ENSMUST00000068411 Mki67E9PVX6 3177 aaKnown RBP7.82□□□□□ -1.16
Ccdc88c-201ENSMUST00000068411 Cystm1Q8K353 104 aa7.81□□□□□ -1.16
Ccdc88c-201ENSMUST00000068411 Notch1Q01705 2531 aa7.81□□□□□ -1.16
Ccdc88c-201ENSMUST00000068411 Camk2n1Q6QWF9 78 aa7.8□□□□□ -1.16
Ccdc88c-201ENSMUST00000068411 Ranbp2Q9ERU9 3053 aaKnown RBP7.8□□□□□ -1.16
Ccdc88c-201ENSMUST00000068411 Kmt2bO08550 2713 aa7.78□□□□□ -1.16
Ccdc88c-201ENSMUST00000068411 Col12a1Q60847 3120 aa7.78□□□□□ -1.16
Ccdc88c-201ENSMUST00000068411 Gm9195A0A140LHT4 2805 aa7.76□□□□□ -1.17
Ccdc88c-201ENSMUST00000068411 Gm10065F6TJM2 114 aa7.75□□□□□ -1.17
Ccdc88c-201ENSMUST00000068411 Gm36176A0A1W2P8D5 158 aa7.74□□□□□ -1.17
Ccdc88c-201ENSMUST00000068411 Gm7173A0A0G2JEB6 3132 aa7.74□□□□□ -1.17
Ccdc88c-201ENSMUST00000068411 Fam229aB2KGE5 128 aa7.72□□□□□ -1.17
Ccdc88c-201ENSMUST00000068411 Odf3bQ5M8M2 238 aa7.7□□□□□ -1.18
Ccdc88c-201ENSMUST00000068411 HttP42859 3119 aa7.7□□□□□ -1.18
Ccdc88c-201ENSMUST00000068411 Gm17349F7BGH6 99 aa7.69□□□□□ -1.18
Ccdc88c-201ENSMUST00000068411 Usp34Q6ZQ93 3582 aa7.69□□□□□ -1.18
Ccdc88c-201ENSMUST00000068411 Gm10139O88245 57 aa7.68□□□□□ -1.18
Ccdc88c-201ENSMUST00000068411 Ash1lQ99MY8 2958 aa7.67□□□□□ -1.18
Ccdc88c-201ENSMUST00000068411 Gm37013Q8K491 104 aa7.67□□□□□ -1.18
Ccdc88c-201ENSMUST00000068411 Stab1Q8R4Y4 2571 aa7.64□□□□□ -1.19
Ccdc88c-201ENSMUST00000068411 Hectd1Q69ZR2 2618 aaKnown RBP7.63□□□□□ -1.19
Ccdc88c-201ENSMUST00000068411 Dmxl1Q6PNC0 3013 aa7.63□□□□□ -1.19
Ccdc88c-201ENSMUST00000068411 Frem2Q6NVD0 3160 aa7.61□□□□□ -1.19
Ccdc88c-201ENSMUST00000068411 Gm3646F6S692 53 aa7.6□□□□□ -1.19
Ccdc88c-201ENSMUST00000068411 A730071L15RikQ8C4X0 137 aa7.59□□□□□ -1.19
Ccdc88c-201ENSMUST00000068411 Sprr1aQ62266 144 aa7.59□□□□□ -1.19
Ccdc88c-201ENSMUST00000068411 Cfap54Q8C6S9 3106 aa7.58□□□□□ -1.2
Ccdc88c-201ENSMUST00000068411 Mast4Q811L6 2618 aa7.58□□□□□ -1.2
Ccdc88c-201ENSMUST00000068411 Unc80Q8BLN6 3261 aa7.56□□□□□ -1.2
Ccdc88c-201ENSMUST00000068411 Gm9507D3Z5T3 223 aa7.56□□□□□ -1.2
Ccdc88c-201ENSMUST00000068411 Rev3lQ61493 3122 aa7.56□□□□□ -1.2
Ccdc88c-201ENSMUST00000068411 Cdh23Q99PF4 3354 aa7.55□□□□□ -1.2
Ccdc88c-201ENSMUST00000068411 Map1aQ9QYR6 2776 aa7.55□□□□□ -1.2
Ccdc88c-201ENSMUST00000068411 Ubr5Q80TP3 2792 aa7.54□□□□□ -1.2
Ccdc88c-201ENSMUST00000068411 Krtap13O88375 197 aa7.54□□□□□ -1.2
Ccdc88c-201ENSMUST00000068411 BptfA2A654 3036 aaKnown RBP7.54□□□□□ -1.2
Ccdc88c-201ENSMUST00000068411 Krtap10-4Q08EG8 221 aa7.53□□□□□ -1.2
Ccdc88c-201ENSMUST00000068411 Gm16253D3Z167 63 aa7.52□□□□□ -1.21
Ccdc88c-201ENSMUST00000068411 MgaA2AWL7 3003 aaKnown RBP7.52□□□□□ -1.21
Ccdc88c-201ENSMUST00000068411 AtmQ62388 3066 aa7.52□□□□□ -1.21
Ccdc88c-201ENSMUST00000068411 Gm19426M0QWC7 77 aa7.51□□□□□ -1.21
Ccdc88c-201ENSMUST00000068411 Vps13aQ5H8C4 3166 aa7.5□□□□□ -1.21
Ccdc88c-201ENSMUST00000068411 Sec61bQ9CQS8 96 aaKnown RBP7.5□□□□□ -1.21
Ccdc88c-201ENSMUST00000068411 NipblQ6KCD5 2798 aaKnown RBP7.48□□□□□ -1.21
Ccdc88c-201ENSMUST00000068411 Itpr3P70227 2670 aa7.48□□□□□ -1.21
Ccdc88c-201ENSMUST00000068411 Celsr3Q91ZI0 3301 aa7.48□□□□□ -1.21
Ccdc88c-201ENSMUST00000068411 Rpl37Q9D823 97 aa7.47□□□□□ -1.21
Ccdc88c-201ENSMUST00000068411 Krtap10-10A0A1W2P7T6 217 aa7.46□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 Romo1P60603 79 aa7.46□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 Fbn2Q61555 2907 aa7.45□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 Nbeal2Q6ZQA0 2742 aa7.45□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 Tep1P97499 2629 aa7.45□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 9530053A07RikE9PVG8 2581 aa7.44□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 Igsf10Q3V1M1 2594 aa7.44□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 Chd7A2AJK6 2986 aaKnown RBP7.44□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 Chd6A3KFM7 2711 aa7.43□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 Itpr1P11881 2749 aa7.43□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 2310050C09RikG5E8Z3 280 aa7.43□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 Gm10382Q3V0T5 144 aa7.41□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 Krtap29-1A2A5X4 342 aa7.41□□□□□ -1.22
Ccdc88c-201ENSMUST00000068411 Gm5767A0A0J9YTU8 78 aa7.39□□□□□ -1.23
Ccdc88c-201ENSMUST00000068411 Gm11565A2A4M7 156 aa7.39□□□□□ -1.23
Ccdc88c-201ENSMUST00000068411 Celsr1O35161 3034 aa7.38□□□□□ -1.23
Ccdc88c-201ENSMUST00000068411 AspmQ8CJ27 3122 aa7.37□□□□□ -1.23
Ccdc88c-201ENSMUST00000068411 BC029722A0A0N4SW31 51 aa7.36□□□□□ -1.23
Ccdc88c-201ENSMUST00000068411 KalrnA2CG49 2964 aa7.33□□□□□ -1.24
Ccdc88c-201ENSMUST00000068411 Tnrc18Q80WC3 2878 aa7.32□□□□□ -1.24
Ccdc88c-201ENSMUST00000068411 4933415A04RikQ9D443 101 aa7.3□□□□□ -1.24
Ccdc88c-201ENSMUST00000068411 Stab2Q8R4U0 2559 aa7.29□□□□□ -1.24
Ccdc88c-201ENSMUST00000068411 Pkd1l1Q8R526 2615 aa7.29□□□□□ -1.24
Ccdc88c-201ENSMUST00000068411 1700042G07RikB1AUF7 90 aa7.28□□□□□ -1.24
Ccdc88c-201ENSMUST00000068411 Krtap14O08640 167 aa7.25□□□□□ -1.25
Ccdc88c-201ENSMUST00000068411 Lama1P19137 3084 aa7.24□□□□□ -1.25
Ccdc88c-201ENSMUST00000068411 Szt2A2A9C3 3431 aa7.23□□□□□ -1.25
Ccdc88c-201ENSMUST00000068411 Brca2P97929 3329 aa7.21□□□□□ -1.26
Ccdc88c-201ENSMUST00000068411 FryE9Q8I9 3020 aa7.19□□□□□ -1.26
Ccdc88c-201ENSMUST00000068411 Lrrc37aB1AWG4 3215 aa7.19□□□□□ -1.26
Ccdc88c-201ENSMUST00000068411 Myo15bI7HPW8 3033 aa7.19□□□□□ -1.26
Ccdc88c-201ENSMUST00000068411 Gm2696A0A1W2P709 240 aa7.18□□□□□ -1.26
Ccdc88c-201ENSMUST00000068411 Gm2310J3QNJ2 377 aa7.17□□□□□ -1.26
Ccdc88c-201ENSMUST00000068411 Col6a5A6H584 2640 aa7.17□□□□□ -1.26
Ccdc88c-201ENSMUST00000068411 DspE9Q557 2883 aaKnown RBP7.17□□□□□ -1.26
Ccdc88c-201ENSMUST00000068411 2310057N15RikQ9D6T8 200 aa7.16□□□□□ -1.26
Ccdc88c-201ENSMUST00000068411 FrylF8VQ05 3007 aa7.15□□□□□ -1.26
Ccdc88c-201ENSMUST00000068411 Zfhx3Q61329 3726 aa7.14□□□□□ -1.27
Ccdc88c-201ENSMUST00000068411 Tnp2P11378 117 aa7.13□□□□□ -1.27
Ccdc88c-201ENSMUST00000068411 Col6a3E9PWQ3 3284 aa7.13□□□□□ -1.27
Ccdc88c-201ENSMUST00000068411 2310061N02RikQ9D6S9 174 aa7.12□□□□□ -1.27
Ccdc88c-201ENSMUST00000068411 Adgrg4B7ZCC9 3073 aa7.11□□□□□ -1.27
Ccdc88c-201ENSMUST00000068411 Muc2Q80Z19 2680 aa7.1□□□□□ -1.27
Ccdc88c-201ENSMUST00000068411 Tex15F8VPN2 2785 aa7.09□□□□□ -1.27
Ccdc88c-201ENSMUST00000068411 Dmxl2Q8BPN8 3032 aa7.09□□□□□ -1.27
Ccdc88c-201ENSMUST00000068411 Wdfy4E9Q2M9 3149 aa7.09□□□□□ -1.27
Ccdc88c-201ENSMUST00000068411 Cox6b2Q80ZN9 88 aa7.07□□□□□ -1.28
Ccdc88c-201ENSMUST00000068411 ApcQ61315 2845 aa7.07□□□□□ -1.28
Ccdc88c-201ENSMUST00000068411 SmcpP15265 143 aa7.04□□□□□ -1.28
Ccdc88c-201ENSMUST00000068411 Ndufaf8A2AMZ4 74 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms