RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Rhox8Q6VSS7 320 aa22.4■■□□□ 1.18
Ccdc88c-201ENSMUST00000068411 Ehmt2Q9Z148 1263 aaKnown RBP20.68■□□□□ 0.9
Ccdc88c-201ENSMUST00000068411 Rpgrip1Q9EPQ2 1331 aa20.12■□□□□ 0.81
Ccdc88c-201ENSMUST00000068411 Wdr66E9Q743 1299 aa19.97■□□□□ 0.79
Ccdc88c-201ENSMUST00000068411 Ccdc136Q3TVA9 1136 aa19.85■□□□□ 0.77
Ccdc88c-201ENSMUST00000068411 Ube2uB1AUC4 352 aa19.79■□□□□ 0.76
Ccdc88c-201ENSMUST00000068411 Zeb1Q64318 1117 aa19.77■□□□□ 0.76
Ccdc88c-201ENSMUST00000068411 Cngb1E1AZ71 1325 aa19.75■□□□□ 0.75
Ccdc88c-201ENSMUST00000068411 Las1lA2BE28 776 aaKnown RBP19.7■□□□□ 0.74
Ccdc88c-201ENSMUST00000068411 Esf1Q3V1V3 845 aaKnown RBP19.69■□□□□ 0.74
Ccdc88c-201ENSMUST00000068411 Gab3Q8BSM5 595 aa19.64■□□□□ 0.73
Ccdc88c-201ENSMUST00000068411 Pelp1Q9DBD5 1123 aaKnown RBP19.42■□□□□ 0.7
Ccdc88c-201ENSMUST00000068411 Npm2Q80W85 207 aa19.34■□□□□ 0.69
Ccdc88c-201ENSMUST00000068411 Myt1lP97500 1187 aa19.33■□□□□ 0.68
Ccdc88c-201ENSMUST00000068411 Amer1Q7TS75 1132 aa19.17■□□□□ 0.66
Ccdc88c-201ENSMUST00000068411 Trim41Q5NCC3 630 aa19.11■□□□□ 0.65
Ccdc88c-201ENSMUST00000068411 Slc24a1Q91WD8 1130 aa19.04■□□□□ 0.64
Ccdc88c-201ENSMUST00000068411 UbtfP25976 765 aaKnown RBP18.94■□□□□ 0.62
Ccdc88c-201ENSMUST00000068411 CenpbP27790 599 aa18.85■□□□□ 0.61
Ccdc88c-201ENSMUST00000068411 Ttbk1Q6PCN3 1308 aa18.71■□□□□ 0.59
Ccdc88c-201ENSMUST00000068411 Acin1Q9JIX8 1338 aaKnown RBP18.69■□□□□ 0.58
Ccdc88c-201ENSMUST00000068411 NefmP08553 848 aa18.56■□□□□ 0.56
Ccdc88c-201ENSMUST00000068411 Ppargc1bQ8VHJ7 1014 aa18.54■□□□□ 0.56
Ccdc88c-201ENSMUST00000068411 Stra8P70278 393 aa18.51■□□□□ 0.55
Ccdc88c-201ENSMUST00000068411 Il27Q8K3I6 234 aa18.51■□□□□ 0.55
Ccdc88c-201ENSMUST00000068411 Neurod1Q60867 357 aa18.46■□□□□ 0.55
Ccdc88c-201ENSMUST00000068411 Ap3b1Q9Z1T1 1105 aa18.41■□□□□ 0.54
Ccdc88c-201ENSMUST00000068411 Cdk11bP24788 784 aaKnown RBP18.37■□□□□ 0.53
Ccdc88c-201ENSMUST00000068411 Eif5bQ05D44 1216 aaKnown RBP18.37■□□□□ 0.53
Ccdc88c-201ENSMUST00000068411 NischQ80TM9 1593 aa18.35■□□□□ 0.53
Ccdc88c-201ENSMUST00000068411 4933416C03RikQ3V063 378 aa18.34■□□□□ 0.53
Ccdc88c-201ENSMUST00000068411 Fam50aQ9WV03 339 aaKnown RBP18.32■□□□□ 0.52
Ccdc88c-201ENSMUST00000068411 Pcgf6Q99NA9 353 aa18.26■□□□□ 0.51
Ccdc88c-201ENSMUST00000068411 NrdcQ8BHG1 1161 aa18.23■□□□□ 0.51
Ccdc88c-201ENSMUST00000068411 NclP09405 707 aaKnown RBP18.22■□□□□ 0.51
Ccdc88c-201ENSMUST00000068411 4930567H17RikQ3V0K5 233 aa18.2■□□□□ 0.5
Ccdc88c-201ENSMUST00000068411 Os9Q8K2C7 672 aa18.19■□□□□ 0.5
Ccdc88c-201ENSMUST00000068411 Nop58Q6DFW4 536 aaKnown RBP18.17■□□□□ 0.5
Ccdc88c-201ENSMUST00000068411 NeflP08551 543 aa18.1■□□□□ 0.49
Ccdc88c-201ENSMUST00000068411 HrcG5E8J6 738 aa18.07■□□□□ 0.48
Ccdc88c-201ENSMUST00000068411 Anp32bQ9EST5 272 aaKnown RBP18.06■□□□□ 0.48
Ccdc88c-201ENSMUST00000068411 Zbtb7cQ8VCZ7 619 aa18.04■□□□□ 0.48
Ccdc88c-201ENSMUST00000068411 Supt5hO55201 1082 aaKnown RBP18.03■□□□□ 0.48
Ccdc88c-201ENSMUST00000068411 Chic1Q8CBW7 227 aa18.03■□□□□ 0.48
Ccdc88c-201ENSMUST00000068411 Tnnt3Q9QZ47 272 aa17.95■□□□□ 0.46
Ccdc88c-201ENSMUST00000068411 Ifnlr1Q8CGK5 535 aa17.93■□□□□ 0.46
Ccdc88c-201ENSMUST00000068411 Ccdc180J3QNE4 1664 aa17.91■□□□□ 0.46
Ccdc88c-201ENSMUST00000068411 Plppr3Q7TPB0 716 aa17.91■□□□□ 0.46
Ccdc88c-201ENSMUST00000068411 TonslQ6NZL6 1363 aa17.87■□□□□ 0.45
Ccdc88c-201ENSMUST00000068411 Zbtb4Q5F293 982 aa17.82■□□□□ 0.44
Ccdc88c-201ENSMUST00000068411 Gm13697A2AK42 830 aa17.77■□□□□ 0.43
Ccdc88c-201ENSMUST00000068411 Mier1Q5UAK0 511 aa17.76■□□□□ 0.43
Ccdc88c-201ENSMUST00000068411 Zcchc6Q5BLK4 1491 aaKnown RBP17.76■□□□□ 0.43
Ccdc88c-201ENSMUST00000068411 Lmod2Q3UHZ5 550 aa17.74■□□□□ 0.43
Ccdc88c-201ENSMUST00000068411 Mapk8ip2Q9ERE9 830 aa17.74■□□□□ 0.43
Ccdc88c-201ENSMUST00000068411 Prdm10Q3UTQ7 1184 aa17.72■□□□□ 0.43
Ccdc88c-201ENSMUST00000068411 Hnrnpul2Q00PI9 745 aaKnown RBP17.7■□□□□ 0.42
Ccdc88c-201ENSMUST00000068411 Myt1Q8CFC2 1127 aa17.69■□□□□ 0.42
Ccdc88c-201ENSMUST00000068411 Gm35339A0A140LHH9 1649 aa17.66■□□□□ 0.42
Ccdc88c-201ENSMUST00000068411 Gm38655A0A286YDK6 273 aa17.66■□□□□ 0.42
Ccdc88c-201ENSMUST00000068411 Plekhg3Q4VAC9 1341 aa17.64■□□□□ 0.41
Ccdc88c-201ENSMUST00000068411 ArxO35085 564 aa17.61■□□□□ 0.41
Ccdc88c-201ENSMUST00000068411 DaxxO35613 739 aa17.6■□□□□ 0.41
Ccdc88c-201ENSMUST00000068411 Atp1b4Q99ME6 356 aa17.6■□□□□ 0.41
Ccdc88c-201ENSMUST00000068411 Abcc9P70170 1546 aa17.57■□□□□ 0.4
Ccdc88c-201ENSMUST00000068411 Polr3glQ8R0C0 218 aa17.55■□□□□ 0.4
Ccdc88c-201ENSMUST00000068411 Erich6D3Z6S9 713 aa17.54■□□□□ 0.4
Ccdc88c-201ENSMUST00000068411 Rtl1Q7M732 1744 aa17.5■□□□□ 0.39
Ccdc88c-201ENSMUST00000068411 Csrnp3P59055 597 aa17.47■□□□□ 0.39
Ccdc88c-201ENSMUST00000068411 Eid3Q3V124 375 aa17.46■□□□□ 0.39
Ccdc88c-201ENSMUST00000068411 Nlrp6Q91WS2 869 aa17.45■□□□□ 0.38
Ccdc88c-201ENSMUST00000068411 Rtl5Q5DTT4 599 aa17.43■□□□□ 0.38
Ccdc88c-201ENSMUST00000068411 Rangap1P46061 589 aaKnown RBP17.42■□□□□ 0.38
Ccdc88c-201ENSMUST00000068411 Anp32aO35381 247 aa17.4■□□□□ 0.38
Ccdc88c-201ENSMUST00000068411 ClspnQ80YR7 1315 aa17.39■□□□□ 0.37
Ccdc88c-201ENSMUST00000068411 Gm13695A2AK44 830 aa17.39■□□□□ 0.37
Ccdc88c-201ENSMUST00000068411 Npm1Q61937 292 aaKnown RBP17.37■□□□□ 0.37
Ccdc88c-201ENSMUST00000068411 Fkbp15Q6P9Q6 1216 aaKnown RBP17.35■□□□□ 0.37
Ccdc88c-201ENSMUST00000068411 DiexfQ8BTT6 772 aaKnown RBP17.32■□□□□ 0.36
Ccdc88c-201ENSMUST00000068411 Sall2Q9QX96 1004 aa17.21■□□□□ 0.35
Ccdc88c-201ENSMUST00000068411 Ythdc1E9Q5K9 736 aaKnown RBP17.17■□□□□ 0.34
Ccdc88c-201ENSMUST00000068411 Rad21Q61550 635 aaKnown RBP17.16■□□□□ 0.34
Ccdc88c-201ENSMUST00000068411 Ppp4r2Q0VGB7 417 aa17.14■□□□□ 0.33
Ccdc88c-201ENSMUST00000068411 Vsig10D3YX43 558 aa17.07■□□□□ 0.32
Ccdc88c-201ENSMUST00000068411 CatipB9EKE5 520 aa17.05■□□□□ 0.32
Ccdc88c-201ENSMUST00000068411 Lmod3E9QA62 571 aa17.04■□□□□ 0.32
Ccdc88c-201ENSMUST00000068411 Calr4Q3TQS0 420 aa17.03■□□□□ 0.32
Ccdc88c-201ENSMUST00000068411 Chic2Q9D9G3 165 aa17.02■□□□□ 0.32
Ccdc88c-201ENSMUST00000068411 Clip1Q922J3 1391 aa17■□□□□ 0.31
Ccdc88c-201ENSMUST00000068411 Anks4bQ8K3X6 423 aa16.97■□□□□ 0.31
Ccdc88c-201ENSMUST00000068411 Trim26Q99PN3 545 aa16.96■□□□□ 0.31
Ccdc88c-201ENSMUST00000068411 Irx6Q9ER75 438 aa16.95■□□□□ 0.3
Ccdc88c-201ENSMUST00000068411 Upf2A2AT37 1269 aaKnown RBP16.95■□□□□ 0.3
Ccdc88c-201ENSMUST00000068411 DekQ7TNV0 380 aaKnown RBP16.94■□□□□ 0.3
Ccdc88c-201ENSMUST00000068411 Mrs2Q5NCE8 434 aa16.9■□□□□ 0.3
Ccdc88c-201ENSMUST00000068411 Safb2Q80YR5 991 aaKnown RBP16.9■□□□□ 0.3
Ccdc88c-201ENSMUST00000068411 Arid4bA2CG63 1314 aaKnown RBP16.85■□□□□ 0.29
Ccdc88c-201ENSMUST00000068411 P3h3Q8CG70 732 aa16.85■□□□□ 0.29
Ccdc88c-201ENSMUST00000068411 Wdr43Q6ZQL4 677 aaKnown RBP16.83■□□□□ 0.29
Ccdc88c-201ENSMUST00000068411 Hsp90aa1P07901 733 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 8.1 ms