RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Itpr2Q9Z329 2701 aa7.9□□□□□ -1.15
Vcpip1-201ENSMUST00000057438 Pkd1l1Q8R526 2615 aa7.89□□□□□ -1.15
Vcpip1-201ENSMUST00000057438 Nbeal2Q6ZQA0 2742 aa7.89□□□□□ -1.15
Vcpip1-201ENSMUST00000057438 Ash1lQ99MY8 2958 aa7.88□□□□□ -1.15
Vcpip1-201ENSMUST00000057438 Spink7Q6IE32 76 aa7.88□□□□□ -1.15
Vcpip1-201ENSMUST00000057438 Anapc11Q9CPX9 84 aa7.87□□□□□ -1.15
Vcpip1-201ENSMUST00000057438 Gm10065F6TJM2 114 aa7.87□□□□□ -1.15
Vcpip1-201ENSMUST00000057438 NbdyA0A0N4SUI7 68 aa7.83□□□□□ -1.16
Vcpip1-201ENSMUST00000057438 Gm4491E0CX42 125 aa7.81□□□□□ -1.16
Vcpip1-201ENSMUST00000057438 ApcQ61315 2845 aa7.8□□□□□ -1.16
Vcpip1-201ENSMUST00000057438 Plac8Q9JI48 112 aa7.79□□□□□ -1.16
Vcpip1-201ENSMUST00000057438 Smim29Q8R043 75 aa7.79□□□□□ -1.16
Vcpip1-201ENSMUST00000057438 Utp20Q5XG71 2788 aaKnown RBP7.78□□□□□ -1.16
Vcpip1-201ENSMUST00000057438 Lama2Q60675 3118 aaKnown RBP7.75□□□□□ -1.17
Vcpip1-201ENSMUST00000057438 UtrnE9Q6R7 3430 aa7.75□□□□□ -1.17
Vcpip1-201ENSMUST00000057438 Odf3bQ5M8M2 238 aa7.74□□□□□ -1.17
Vcpip1-201ENSMUST00000057438 Camk2n1Q6QWF9 78 aa7.71□□□□□ -1.18
Vcpip1-201ENSMUST00000057438 Bod1lE9Q6J5 3032 aa7.71□□□□□ -1.18
Vcpip1-201ENSMUST00000057438 Gm3646F6S692 53 aa7.7□□□□□ -1.18
Vcpip1-201ENSMUST00000057438 Ubr5Q80TP3 2792 aa7.7□□□□□ -1.18
Vcpip1-201ENSMUST00000057438 Gm3250E9Q1M3 230 aa7.68□□□□□ -1.18
Vcpip1-201ENSMUST00000057438 Dmxl1Q6PNC0 3013 aa7.68□□□□□ -1.18
Vcpip1-201ENSMUST00000057438 Gm10139O88245 57 aa7.67□□□□□ -1.18
Vcpip1-201ENSMUST00000057438 Ranbp2Q9ERU9 3053 aaKnown RBP7.67□□□□□ -1.18
Vcpip1-201ENSMUST00000057438 Gm37013Q8K491 104 aa7.66□□□□□ -1.18
Vcpip1-201ENSMUST00000057438 Romo1P60603 79 aa7.66□□□□□ -1.18
Vcpip1-201ENSMUST00000057438 Tex15F8VPN2 2785 aa7.65□□□□□ -1.19
Vcpip1-201ENSMUST00000057438 Fam229aB2KGE5 128 aa7.64□□□□□ -1.19
Vcpip1-201ENSMUST00000057438 MgaA2AWL7 3003 aaKnown RBP7.62□□□□□ -1.19
Vcpip1-201ENSMUST00000057438 Rpl37Q9D823 97 aa7.61□□□□□ -1.19
Vcpip1-201ENSMUST00000057438 Gm11565A2A4M7 156 aa7.6□□□□□ -1.19
Vcpip1-201ENSMUST00000057438 Gm10320E9PW43 113 aa7.59□□□□□ -1.19
Vcpip1-201ENSMUST00000057438 Cystm1Q8K353 104 aa7.59□□□□□ -1.19
Vcpip1-201ENSMUST00000057438 Fbn2Q61555 2907 aa7.59□□□□□ -1.19
Vcpip1-201ENSMUST00000057438 1700042G07RikB1AUF7 90 aa7.59□□□□□ -1.2
Vcpip1-201ENSMUST00000057438 FlncQ8VHX6 2726 aaKnown RBP7.58□□□□□ -1.2
Vcpip1-201ENSMUST00000057438 Gm16253D3Z167 63 aa7.58□□□□□ -1.2
Vcpip1-201ENSMUST00000057438 Sprr1aQ62266 144 aa7.56□□□□□ -1.2
Vcpip1-201ENSMUST00000057438 Igfn1Q3KNY0 2849 aa7.56□□□□□ -1.2
Vcpip1-201ENSMUST00000057438 Muc2Q80Z19 2680 aa7.56□□□□□ -1.2
Vcpip1-201ENSMUST00000057438 DspE9Q557 2883 aaKnown RBP7.54□□□□□ -1.2
Vcpip1-201ENSMUST00000057438 Chd7A2AJK6 2986 aaKnown RBP7.54□□□□□ -1.2
Vcpip1-201ENSMUST00000057438 Sec61bQ9CQS8 96 aaKnown RBP7.53□□□□□ -1.2
Vcpip1-201ENSMUST00000057438 A730071L15RikQ8C4X0 137 aa7.52□□□□□ -1.21
Vcpip1-201ENSMUST00000057438 Krtap15-1Q9QZU5 150 aa7.51□□□□□ -1.21
Vcpip1-201ENSMUST00000057438 KalrnA2CG49 2964 aa7.51□□□□□ -1.21
Vcpip1-201ENSMUST00000057438 FrylF8VQ05 3007 aa7.5□□□□□ -1.21
Vcpip1-201ENSMUST00000057438 Gm10382Q3V0T5 144 aa7.5□□□□□ -1.21
Vcpip1-201ENSMUST00000057438 TrioQ0KL02 3102 aa7.49□□□□□ -1.21
Vcpip1-201ENSMUST00000057438 4933415A04RikQ9D443 101 aa7.49□□□□□ -1.21
Vcpip1-201ENSMUST00000057438 Vps13aQ5H8C4 3166 aa7.47□□□□□ -1.21
Vcpip1-201ENSMUST00000057438 BptfA2A654 3036 aaKnown RBP7.46□□□□□ -1.22
Vcpip1-201ENSMUST00000057438 BC029722A0A0N4SW31 51 aa7.46□□□□□ -1.22
Vcpip1-201ENSMUST00000057438 Srrm2Q8BTI8 2703 aaKnown RBP7.45□□□□□ -1.22
Vcpip1-201ENSMUST00000057438 Zzef1Q5SSH7 2924 aa7.42□□□□□ -1.22
Vcpip1-201ENSMUST00000057438 Krtap29-1A2A5X4 342 aa7.42□□□□□ -1.22
Vcpip1-201ENSMUST00000057438 Cox6b2Q80ZN9 88 aa7.42□□□□□ -1.22
Vcpip1-201ENSMUST00000057438 Gm7173A0A0G2JEB6 3132 aa7.41□□□□□ -1.22
Vcpip1-201ENSMUST00000057438 Hivep1Q03172 2688 aa7.4□□□□□ -1.22
Vcpip1-201ENSMUST00000057438 Mki67E9PVX6 3177 aaKnown RBP7.4□□□□□ -1.22
Vcpip1-201ENSMUST00000057438 Usp34Q6ZQ93 3582 aa7.39□□□□□ -1.23
Vcpip1-201ENSMUST00000057438 Gm5767A0A0J9YTU8 78 aa7.39□□□□□ -1.23
Vcpip1-201ENSMUST00000057438 FcgbpE9Q0B5 2583 aa7.39□□□□□ -1.23
Vcpip1-201ENSMUST00000057438 Lama3Q61789 3330 aa7.38□□□□□ -1.23
Vcpip1-201ENSMUST00000057438 FryE9Q8I9 3020 aa7.37□□□□□ -1.23
Vcpip1-201ENSMUST00000057438 Gm19426M0QWC7 77 aa7.37□□□□□ -1.23
Vcpip1-201ENSMUST00000057438 Cfap54Q8C6S9 3106 aa7.37□□□□□ -1.23
Vcpip1-201ENSMUST00000057438 Rev3lQ61493 3122 aa7.34□□□□□ -1.23
Vcpip1-201ENSMUST00000057438 AtmQ62388 3066 aa7.32□□□□□ -1.24
Vcpip1-201ENSMUST00000057438 Gm3233E9Q2H5 230 aa7.32□□□□□ -1.24
Vcpip1-201ENSMUST00000057438 Myo15bI7HPW8 3033 aa7.31□□□□□ -1.24
Vcpip1-201ENSMUST00000057438 Tenm1Q9WTS4 2731 aa7.31□□□□□ -1.24
Vcpip1-201ENSMUST00000057438 TgO08710 2766 aa7.31□□□□□ -1.24
Vcpip1-201ENSMUST00000057438 Rps29P62274 56 aa7.28□□□□□ -1.24
Vcpip1-201ENSMUST00000057438 Chd9Q8BYH8 2885 aa7.28□□□□□ -1.24
Vcpip1-201ENSMUST00000057438 Trank1Q8BV79 2999 aa7.28□□□□□ -1.24
Vcpip1-201ENSMUST00000057438 SmcpP15265 143 aa7.27□□□□□ -1.25
Vcpip1-201ENSMUST00000057438 Gm2310J3QNJ2 377 aa7.26□□□□□ -1.25
Vcpip1-201ENSMUST00000057438 Col12a1Q60847 3120 aa7.26□□□□□ -1.25
Vcpip1-201ENSMUST00000057438 Wdfy4E9Q2M9 3149 aa7.22□□□□□ -1.25
Vcpip1-201ENSMUST00000057438 Gm7138L7N2C3 230 aa7.21□□□□□ -1.25
Vcpip1-201ENSMUST00000057438 Gm3238W4VSP7 230 aa7.21□□□□□ -1.25
Vcpip1-201ENSMUST00000057438 2310050C09RikG5E8Z3 280 aa7.2□□□□□ -1.26
Vcpip1-201ENSMUST00000057438 Pdzd2E9Q1M1 2796 aa7.2□□□□□ -1.26
Vcpip1-201ENSMUST00000057438 Nf1Q04690 2841 aa7.19□□□□□ -1.26
Vcpip1-201ENSMUST00000057438 Lelp1Q9DAE3 120 aa7.19□□□□□ -1.26
Vcpip1-201ENSMUST00000057438 Unc80Q8BLN6 3261 aa7.19□□□□□ -1.26
Vcpip1-201ENSMUST00000057438 Gm17349F7BGH6 99 aa7.17□□□□□ -1.26
Vcpip1-201ENSMUST00000057438 HttP42859 3119 aa7.15□□□□□ -1.27
Vcpip1-201ENSMUST00000057438 Gm40193A0A1B0GT39 78 aa7.12□□□□□ -1.27
Vcpip1-201ENSMUST00000057438 Celsr1O35161 3034 aa7.12□□□□□ -1.27
Vcpip1-201ENSMUST00000057438 NbeaQ9EPN1 2936 aa7.11□□□□□ -1.27
Vcpip1-201ENSMUST00000057438 Frem2Q6NVD0 3160 aa7.11□□□□□ -1.27
Vcpip1-201ENSMUST00000057438 Lama1P19137 3084 aa7.11□□□□□ -1.27
Vcpip1-201ENSMUST00000057438 Gm9508A0A1W2P7W0 230 aa7.1□□□□□ -1.27
Vcpip1-201ENSMUST00000057438 AspmQ8CJ27 3122 aa7.09□□□□□ -1.27
Vcpip1-201ENSMUST00000057438 Ndufaf8A2AMZ4 74 aa7.08□□□□□ -1.28
Vcpip1-201ENSMUST00000057438 Gm7137J3QMW1 236 aa7.08□□□□□ -1.28
Vcpip1-201ENSMUST00000057438 Dmxl2Q8BPN8 3032 aa7.07□□□□□ -1.28
Vcpip1-201ENSMUST00000057438 Celsr2Q9R0M0 2920 aa7.06□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 72.3 ms