RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Sprr4Q8CGN8 76 aa3.68□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 Gm9821Q8K076 103 aa3.68□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 Nf1Q04690 2841 aa3.68□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 Gm37013Q8K491 104 aa3.67□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 NipblQ6KCD5 2798 aaKnown RBP3.67□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 HrnrQ8VHD8 2496 aa3.67□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 D730001G18RikA0A087WQU7 115 aa3.67□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 Gm28230A0A0A0MQ91 144 aa3.67□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 Krtap10-10A0A1W2P7T6 217 aa3.67□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 PtprqP0C5E4 2300 aa3.66□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 Defb2P82020 71 aa3.66□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 FlncQ8VHX6 2726 aaKnown RBP3.65□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 Ighv8-13A0A075B5Y0 101 aa3.65□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 PolqQ8CGS6 2544 aa3.65□□□□□ -1.82
Rc3h1-201ENSMUST00000035911 Igkv3-12A0A140T8P0 119 aa3.65□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Limd2Q8BGB5 128 aa3.65□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Spata3Q9D9T6 193 aa3.65□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Chchd10Q7TNL9 138 aa3.64□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Fam168bQ80XQ8 194 aa3.64□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Mast4Q811L6 2618 aa3.63□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Prol1E9PYQ4 312 aa3.63□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Snhg11Q4G0K9 87 aa3.63□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Gm16485Q8C4B7 115 aa3.63□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Usp9yF8VPU6 2556 aa3.63□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Epg5Q80TA9 2572 aa3.63□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Muc2Q80Z19 2680 aa3.61□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 OtogO55225 2910 aa3.61□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Myo18bE9PV66 2605 aa3.61□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Gm12216A0A1W2P827 62 aa3.6□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Uqcr11Q9CPX8 56 aa3.6□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Gm11627A6PWP4 55 aa3.6□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 TrrapQ80YV3 2565 aaKnown RBP3.6□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Tex15F8VPN2 2785 aa3.59□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Unc79Q0KK59 2596 aa3.59□□□□□ -1.83
Rc3h1-201ENSMUST00000035911 Cypt15B1AXS0 87 aa3.58□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Notch2O35516 2470 aa3.58□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 ApcQ61315 2845 aa3.58□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 FlnaQ8BTM8 2647 aaKnown RBP3.58□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Q8BGJ3 129 aa3.58□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 2310034C09RikQ9D746 214 aa3.58□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Krtap3-2Q9D638 99 aa3.57□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Krtap3-3Q9D7P0 99 aa3.57□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 1700012A03RikQ9DAF1 130 aa3.57□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 2210017I01RikA0A0A6YVV1 95 aa3.57□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Gm4707V9GXN5 68 aa3.57□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Col7a1Q63870 2944 aa3.56□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Csmd2V9GX34 3611 aa3.56□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Gm2310J3QNJ2 377 aa3.56□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Odf3bQ5M8M2 238 aa3.56□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Plac8Q9JI48 112 aa3.56□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 TgO08710 2766 aa3.55□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Nbeal2Q6ZQA0 2742 aa3.55□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Igkv3-5A0A140T8M6 119 aa3.54□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Cypt14J3QPF7 87 aa3.54□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Wfdc10Q3V2J9 124 aa3.54□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Sec61bQ9CQS8 96 aaKnown RBP3.54□□□□□ -1.84
Rc3h1-201ENSMUST00000035911 Gm21798J3QNU5 87 aa3.52□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Krtap24-1G3X9A2 248 aa3.52□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Defb13Q8R2I4 64 aa3.52□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Notch1Q01705 2531 aa3.52□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Sprr1aQ62266 144 aa3.51□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 SycnQ8VCK7 134 aa3.51□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Gm10139O88245 57 aa3.5□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 AplnQ9R0R4 77 aa3.5□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 CubnQ9JLB4 3623 aa3.49□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Pdzd2E9Q1M1 2796 aa3.49□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Tenm3Q9WTS6 2715 aa3.49□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Xirp2Q4U4S6 3784 aa3.49□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Mp68P56379 58 aa3.48□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Znf706Q9D115 76 aaKnown RBP3.48□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Sslp1Q3UN54 99 aa3.47□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Ank2Q8C8R3 3898 aa3.47□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 6030445D17RikE9Q8F9 148 aa3.46□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Gm20538F6Z9R1 75 aa3.46□□□□□ -1.85
Rc3h1-201ENSMUST00000035911 Gm10999F6Q4M4 69 aa3.46□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Gm3250E9Q1M3 230 aa3.45□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Defb1P56386 69 aa3.45□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Q8K1L6 76 aa3.45□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Nsd1O88491 2588 aaKnown RBP3.44□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Srrm2Q8BTI8 2703 aaKnown RBP3.44□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 AtrQ9JKK8 2635 aa3.44□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Pla2g10Q9QXX3 151 aa3.43□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 FlnbQ80X90 2602 aaKnown RBP3.43□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 FasnP19096 2504 aaKnown RBP3.43□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Fbn1Q61554 2873 aaKnown RBP3.42□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Gm10642Q3TWM1 71 aa3.42□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Gm27235Q3UW50 83 aa3.42□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Tenm4Q3UHK6 2771 aa3.42□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 9530053A07RikE9PVG8 2581 aa3.42□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 CicQ924A2 2510 aa3.41□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Defb9Q8R2I6 67 aa3.41□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Tenm2Q9WTS5 2764 aa3.41□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Col6a5A6H584 2640 aa3.41□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Gm3233E9Q2H5 230 aa3.41□□□□□ -1.86
Rc3h1-201ENSMUST00000035911 Wfdc3Q14AE4 130 aa3.39□□□□□ -1.87
Rc3h1-201ENSMUST00000035911 Romo1P60603 79 aa3.38□□□□□ -1.87
Rc3h1-201ENSMUST00000035911 Defb10Q8R2I8 73 aa3.38□□□□□ -1.87
Rc3h1-201ENSMUST00000035911 Anapc11Q9CPX9 84 aa3.38□□□□□ -1.87
Rc3h1-201ENSMUST00000035911 Fn1P11276 2477 aaKnown RBP3.37□□□□□ -1.87
Rc3h1-201ENSMUST00000035911 Itpr2Q9Z329 2701 aa3.37□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 119.5 ms