RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Hivep1Q03172 2688 aa6.65□□□□□ -1.34
Ldlr-201ENSMUST00000034713 Snhg11Q4G0K9 87 aa6.65□□□□□ -1.34
Ldlr-201ENSMUST00000034713 Igkv8-28A0A0G2JE47 121 aa6.64□□□□□ -1.35
Ldlr-201ENSMUST00000034713 Gm7276Q3TYW4 209 aa6.64□□□□□ -1.35
Ldlr-201ENSMUST00000034713 Celsr2Q9R0M0 2920 aa6.64□□□□□ -1.35
Ldlr-201ENSMUST00000034713 Pkd1l1Q8R526 2615 aa6.64□□□□□ -1.35
Ldlr-201ENSMUST00000034713 Adm2Q7TNK8 150 aa6.63□□□□□ -1.35
Ldlr-201ENSMUST00000034713 Coa5Q99M07 74 aa6.63□□□□□ -1.35
Ldlr-201ENSMUST00000034713 AW011738F6S7Q2 159 aa6.62□□□□□ -1.35
Ldlr-201ENSMUST00000034713 Sprr4Q8CGN8 76 aa6.62□□□□□ -1.35
Ldlr-201ENSMUST00000034713 Gm10643Q3URG9 111 aa6.61□□□□□ -1.35
Ldlr-201ENSMUST00000034713 Phxr4P15974 95 aa6.61□□□□□ -1.35
Ldlr-201ENSMUST00000034713 A930002H24RikQ8C8Y3 163 aa6.61□□□□□ -1.35
Ldlr-201ENSMUST00000034713 Igsf10Q3V1M1 2594 aa6.6□□□□□ -1.35
Ldlr-201ENSMUST00000034713 Gm11213A0A1B0GR83 88 aa6.6□□□□□ -1.35
Ldlr-201ENSMUST00000034713 Gm21887J3QQ04 176 aa6.59□□□□□ -1.35
Ldlr-201ENSMUST00000034713 Igkv3-7A0A0G2JE31 119 aa6.58□□□□□ -1.36
Ldlr-201ENSMUST00000034713 CnbpP53996 178 aaKnown RBP6.58□□□□□ -1.36
Ldlr-201ENSMUST00000034713 Nf1Q04690 2841 aa6.57□□□□□ -1.36
Ldlr-201ENSMUST00000034713 Krtap11-1E9Q2E9 183 aa6.57□□□□□ -1.36
Ldlr-201ENSMUST00000034713 Q8BT88 171 aa6.56□□□□□ -1.36
Ldlr-201ENSMUST00000034713 C530025M09RikF6RGA8 229 aa6.56□□□□□ -1.36
Ldlr-201ENSMUST00000034713 Znf414Q9DCK4 299 aa6.56□□□□□ -1.36
Ldlr-201ENSMUST00000034713 Akap9Q70FJ1 3797 aa6.55□□□□□ -1.36
Ldlr-201ENSMUST00000034713 Gm20661K7N787 53 aa6.55□□□□□ -1.36
Ldlr-201ENSMUST00000034713 AplnQ9R0R4 77 aa6.55□□□□□ -1.36
Ldlr-201ENSMUST00000034713 LrbaQ9ESE1 2856 aa6.54□□□□□ -1.36
Ldlr-201ENSMUST00000034713 Gm27235Q3UW50 83 aa6.54□□□□□ -1.36
Ldlr-201ENSMUST00000034713 Gm5617Q91VN2 117 aa6.54□□□□□ -1.36
Ldlr-201ENSMUST00000034713 1600014C23RikQ9DAX4 101 aa6.53□□□□□ -1.36
Ldlr-201ENSMUST00000034713 Wfdc3Q14AE4 130 aa6.52□□□□□ -1.37
Ldlr-201ENSMUST00000034713 Gm10642Q3TWM1 71 aa6.52□□□□□ -1.37
Ldlr-201ENSMUST00000034713 A330070K13RikQ8CA53 115 aa6.52□□□□□ -1.37
Ldlr-201ENSMUST00000034713 Phf5aP83870 110 aaKnown RBP6.5□□□□□ -1.37
Ldlr-201ENSMUST00000034713 Rpl37aP61514 92 aa6.49□□□□□ -1.37
Ldlr-201ENSMUST00000034713 Uqcr11Q9CPX8 56 aa6.49□□□□□ -1.37
Ldlr-201ENSMUST00000034713 9530053A07RikE9PVG8 2581 aa6.49□□□□□ -1.37
Ldlr-201ENSMUST00000034713 Stab2Q8R4U0 2559 aa6.49□□□□□ -1.37
Ldlr-201ENSMUST00000034713 Phxr5P08399 672 aa6.48□□□□□ -1.37
Ldlr-201ENSMUST00000034713 4930507D05RikQ8C9C9 103 aa6.48□□□□□ -1.37
Ldlr-201ENSMUST00000034713 Defb39Q70KL3 74 aa6.48□□□□□ -1.37
Ldlr-201ENSMUST00000034713 Gm7138L7N2C3 230 aa6.48□□□□□ -1.37
Ldlr-201ENSMUST00000034713 Gm3238W4VSP7 230 aa6.48□□□□□ -1.37
Ldlr-201ENSMUST00000034713 SpenQ62504 3644 aaKnown RBP6.47□□□□□ -1.37
Ldlr-201ENSMUST00000034713 Fam168bQ80XQ8 194 aa6.46□□□□□ -1.38
Ldlr-201ENSMUST00000034713 Gm10999F6Q4M4 69 aa6.45□□□□□ -1.38
Ldlr-201ENSMUST00000034713 Fam229bQ8CF36 80 aa6.45□□□□□ -1.38
Ldlr-201ENSMUST00000034713 Gm7137J3QMW1 236 aa6.43□□□□□ -1.38
Ldlr-201ENSMUST00000034713 OxtP35454 125 aa6.42□□□□□ -1.38
Ldlr-201ENSMUST00000034713 Fam104aA2A6P4 185 aa6.42□□□□□ -1.38
Ldlr-201ENSMUST00000034713 Gm17606F6ZL36 78 aa6.41□□□□□ -1.38
Ldlr-201ENSMUST00000034713 Gm12216A0A1W2P827 62 aa6.39□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Chtf8P0CG14 533 aa6.39□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Itpr2Q9Z329 2701 aa6.39□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Csmd1Q923L3 3564 aa6.38□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Vps13cQ8BX70 3748 aa6.38□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Gpr15lA0A0B4J1N3 78 aa6.37□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Muc5acE9QAQ8 3455 aa6.37□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Helz2E9QAM5 2947 aaKnown RBP6.36□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Gm36176A0A1W2P8D5 158 aa6.36□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Q8BGJ3 129 aa6.36□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Zcchc13Q9D548 170 aa6.36□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Smg1Q8BKX6 3658 aaKnown RBP6.35□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Gm10320E9PW43 113 aa6.35□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Spaca4Q80ZQ0 127 aa6.34□□□□□ -1.39
Ldlr-201ENSMUST00000034713 Cystm1Q8K353 104 aa6.33□□□□□ -1.4
Ldlr-201ENSMUST00000034713 Cypt15B1AXS0 87 aa6.33□□□□□ -1.4
Ldlr-201ENSMUST00000034713 Pdzd2E9Q1M1 2796 aa6.32□□□□□ -1.4
Ldlr-201ENSMUST00000034713 Zfhx4Q9JJN2 3550 aa6.3□□□□□ -1.4
Ldlr-201ENSMUST00000034713 Tenm4Q3UHK6 2771 aa6.3□□□□□ -1.4
Ldlr-201ENSMUST00000034713 Gm17349F7BGH6 99 aa6.29□□□□□ -1.4
Ldlr-201ENSMUST00000034713 Tenm3Q9WTS6 2715 aa6.29□□□□□ -1.4
Ldlr-201ENSMUST00000034713 Mp68P56379 58 aa6.29□□□□□ -1.4
Ldlr-201ENSMUST00000034713 Defb9Q8R2I6 67 aa6.29□□□□□ -1.4
Ldlr-201ENSMUST00000034713 SmcpP15265 143 aa6.27□□□□□ -1.41
Ldlr-201ENSMUST00000034713 Zfhx3Q61329 3726 aa6.27□□□□□ -1.41
Ldlr-201ENSMUST00000034713 Plac8Q9JI48 112 aa6.26□□□□□ -1.41
Ldlr-201ENSMUST00000034713 A730071L15RikQ8C4X0 137 aa6.26□□□□□ -1.41
Ldlr-201ENSMUST00000034713 Smim29Q8R043 75 aa6.25□□□□□ -1.41
Ldlr-201ENSMUST00000034713 Cypt14J3QPF7 87 aa6.25□□□□□ -1.41
Ldlr-201ENSMUST00000034713 Defb1P56386 69 aa6.24□□□□□ -1.41
Ldlr-201ENSMUST00000034713 Lama5Q61001 3718 aa6.24□□□□□ -1.41
Ldlr-201ENSMUST00000034713 ApcQ61315 2845 aa6.23□□□□□ -1.41
Ldlr-201ENSMUST00000034713 Gm10065F6TJM2 114 aa6.21□□□□□ -1.42
Ldlr-201ENSMUST00000034713 Gm21798J3QNU5 87 aa6.19□□□□□ -1.42
Ldlr-201ENSMUST00000034713 Sec61bQ9CQS8 96 aaKnown RBP6.19□□□□□ -1.42
Ldlr-201ENSMUST00000034713 Gm10139O88245 57 aa6.19□□□□□ -1.42
Ldlr-201ENSMUST00000034713 Sprr1aQ62266 144 aa6.19□□□□□ -1.42
Ldlr-201ENSMUST00000034713 RetnlbQ99P86 105 aa6.18□□□□□ -1.42
Ldlr-201ENSMUST00000034713 Gm26620Q9CY65 116 aa6.18□□□□□ -1.42
Ldlr-201ENSMUST00000034713 2310034C09RikQ9D746 214 aa6.18□□□□□ -1.42
Ldlr-201ENSMUST00000034713 Gm37013Q8K491 104 aa6.17□□□□□ -1.42
Ldlr-201ENSMUST00000034713 Srrm2Q8BTI8 2703 aaKnown RBP6.16□□□□□ -1.42
Ldlr-201ENSMUST00000034713 NbdyA0A0N4SUI7 68 aa6.16□□□□□ -1.42
Ldlr-201ENSMUST00000034713 Anapc11Q9CPX9 84 aa6.15□□□□□ -1.43
Ldlr-201ENSMUST00000034713 OtogO55225 2910 aa6.13□□□□□ -1.43
Ldlr-201ENSMUST00000034713 1700042G07RikB1AUF7 90 aa6.13□□□□□ -1.43
Ldlr-201ENSMUST00000034713 Gm884A2A9H6 3643 aa6.13□□□□□ -1.43
Ldlr-201ENSMUST00000034713 Pla2g10Q9QXX3 151 aa6.12□□□□□ -1.43
Ldlr-201ENSMUST00000034713 Muc4Q8JZM8 3443 aa6.12□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms