RNA–Protein interactions for RNA: ENSMUST00000029444.12

Trim33-201, Transcript of E3 ubiquitin-protein ligase TRIM33, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim33, Length 8,875 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33-201ENSMUST00000029444 Gm37013Q8K491 104 aa12,99□□□□□ -0,33
Trim33-201ENSMUST00000029444 Rpl37Q9D823 97 aa12,94□□□□□ -0,34
Trim33-201ENSMUST00000029444 Jbts17Q8CE72 3214 aa12,92□□□□□ -0,34
Trim33-201ENSMUST00000029444 Stab2Q8R4U0 2559 aa12,9□□□□□ -0,34
Trim33-201ENSMUST00000029444 Gm3646F6S692 53 aa12,89□□□□□ -0,35
Trim33-201ENSMUST00000029444 Gm10139O88245 57 aa12,89□□□□□ -0,35
Trim33-201ENSMUST00000029444 Gm11565A2A4M7 156 aa12,89□□□□□ -0,35
Trim33-201ENSMUST00000029444 Sec61bQ9CQS8 96 aaKnown RBP12,88□□□□□ -0,35
Trim33-201ENSMUST00000029444 Golgb1E9PVZ8 3238 aa12,87□□□□□ -0,35
Trim33-201ENSMUST00000029444 Ep400Q8CHI8 3072 aaKnown RBP12,86□□□□□ -0,35
Trim33-201ENSMUST00000029444 SrcapA0A087WQ44 3271 aa12,86□□□□□ -0,35
Trim33-201ENSMUST00000029444 Itpr1P11881 2749 aa12,84□□□□□ -0,35
Trim33-201ENSMUST00000029444 Pkd1l1Q8R526 2615 aa12,83□□□□□ -0,36
Trim33-201ENSMUST00000029444 Dnah12Q3V0Q1 3086 aa12,82□□□□□ -0,36
Trim33-201ENSMUST00000029444 Gm16253D3Z167 63 aa12,81□□□□□ -0,36
Trim33-201ENSMUST00000029444 Gm42715A0A087WP63 3095 aaKnown RBP12,77□□□□□ -0,37
Trim33-201ENSMUST00000029444 Gm10320E9PW43 113 aa12,77□□□□□ -0,37
Trim33-201ENSMUST00000029444 Itpr2Q9Z329 2701 aa12,77□□□□□ -0,37
Trim33-201ENSMUST00000029444 1700042G07RikB1AUF7 90 aa12,74□□□□□ -0,37
Trim33-201ENSMUST00000029444 Utp20Q5XG71 2788 aaKnown RBP12,72□□□□□ -0,37
Trim33-201ENSMUST00000029444 BC029722A0A0N4SW31 51 aa12,72□□□□□ -0,37
Trim33-201ENSMUST00000029444 ApcQ61315 2845 aa12,71□□□□□ -0,37
Trim33-201ENSMUST00000029444 Cox6b2Q80ZN9 88 aa12,7□□□□□ -0,38
Trim33-201ENSMUST00000029444 Tnrc18Q80WC3 2878 aa12,7□□□□□ -0,38
Trim33-201ENSMUST00000029444 Sprr1aQ62266 144 aa12,69□□□□□ -0,38
Trim33-201ENSMUST00000029444 Gm10382Q3V0T5 144 aa12,68□□□□□ -0,38
Trim33-201ENSMUST00000029444 Krtap15-1Q9QZU5 150 aa12,61□□□□□ -0,39
Trim33-201ENSMUST00000029444 Cep350E9Q309 3095 aa12,61□□□□□ -0,39
Trim33-201ENSMUST00000029444 Tex15F8VPN2 2785 aa12,56□□□□□ -0,4
Trim33-201ENSMUST00000029444 Nbeal2Q6ZQA0 2742 aa12,54□□□□□ -0,4
Trim33-201ENSMUST00000029444 Gm5767A0A0J9YTU8 78 aa12,54□□□□□ -0,4
Trim33-201ENSMUST00000029444 Ubr5Q80TP3 2792 aa12,54□□□□□ -0,4
Trim33-201ENSMUST00000029444 4933415A04RikQ9D443 101 aa12,53□□□□□ -0,4
Trim33-201ENSMUST00000029444 Prune2Q52KR3 3084 aa12,53□□□□□ -0,4
Trim33-201ENSMUST00000029444 Gm19426M0QWC7 77 aa12,52□□□□□ -0,4
Trim33-201ENSMUST00000029444 Gm3250E9Q1M3 230 aa12,51□□□□□ -0,41
Trim33-201ENSMUST00000029444 A730071L15RikQ8C4X0 137 aa12,5□□□□□ -0,41
Trim33-201ENSMUST00000029444 Krtap29-1A2A5X4 342 aa12,48□□□□□ -0,41
Trim33-201ENSMUST00000029444 Rps29P62274 56 aa12,48□□□□□ -0,41
Trim33-201ENSMUST00000029444 Cystm1Q8K353 104 aa12,47□□□□□ -0,41
Trim33-201ENSMUST00000029444 Ash1lQ99MY8 2958 aa12,39□□□□□ -0,43
Trim33-201ENSMUST00000029444 Gm40193A0A1B0GT39 78 aa12,27□□□□□ -0,45
Trim33-201ENSMUST00000029444 Ndufaf8A2AMZ4 74 aa12,26□□□□□ -0,45
Trim33-201ENSMUST00000029444 Srrm2Q8BTI8 2703 aaKnown RBP12,23□□□□□ -0,45
Trim33-201ENSMUST00000029444 Muc2Q80Z19 2680 aa12,23□□□□□ -0,45
Trim33-201ENSMUST00000029444 MgaA2AWL7 3003 aaKnown RBP12,21□□□□□ -0,45
Trim33-201ENSMUST00000029444 Dmxl1Q6PNC0 3013 aa12,21□□□□□ -0,45
Trim33-201ENSMUST00000029444 2310050C09RikG5E8Z3 280 aa12,2□□□□□ -0,46
Trim33-201ENSMUST00000029444 Gm2310J3QNJ2 377 aa12,15□□□□□ -0,46
Trim33-201ENSMUST00000029444 Fbn2Q61555 2907 aa12,1□□□□□ -0,47
Trim33-201ENSMUST00000029444 Lama2Q60675 3118 aaKnown RBP12,09□□□□□ -0,47
Trim33-201ENSMUST00000029444 Zzef1Q5SSH7 2924 aa12,09□□□□□ -0,47
Trim33-201ENSMUST00000029444 Bod1lE9Q6J5 3032 aa12,06□□□□□ -0,48
Trim33-201ENSMUST00000029444 FrylF8VQ05 3007 aa12,05□□□□□ -0,48
Trim33-201ENSMUST00000029444 FcgbpE9Q0B5 2583 aa12,05□□□□□ -0,48
Trim33-201ENSMUST00000029444 SmcpP15265 143 aa12,01□□□□□ -0,49
Trim33-201ENSMUST00000029444 TgO08710 2766 aa12,01□□□□□ -0,49
Trim33-201ENSMUST00000029444 Hivep1Q03172 2688 aa11,98□□□□□ -0,49
Trim33-201ENSMUST00000029444 KalrnA2CG49 2964 aa11,97□□□□□ -0,49
Trim33-201ENSMUST00000029444 Tnp1P10856 55 aa11,97□□□□□ -0,49
Trim33-201ENSMUST00000029444 DspE9Q557 2883 aaKnown RBP11,95□□□□□ -0,5
Trim33-201ENSMUST00000029444 Ranbp2Q9ERU9 3053 aaKnown RBP11,94□□□□□ -0,5
Trim33-201ENSMUST00000029444 Gm17349F7BGH6 99 aa11,91□□□□□ -0,5
Trim33-201ENSMUST00000029444 Chd7A2AJK6 2986 aaKnown RBP11,91□□□□□ -0,5
Trim33-201ENSMUST00000029444 BptfA2A654 3036 aaKnown RBP11,89□□□□□ -0,51
Trim33-201ENSMUST00000029444 UtrnE9Q6R7 3430 aa11,89□□□□□ -0,51
Trim33-201ENSMUST00000029444 Gm9112A2AI92 75 aa11,88□□□□□ -0,51
Trim33-201ENSMUST00000029444 Gm3233E9Q2H5 230 aa11,87□□□□□ -0,51
Trim33-201ENSMUST00000029444 Igfn1Q3KNY0 2849 aa11,87□□□□□ -0,51
Trim33-201ENSMUST00000029444 Gm21887J3QQ04 176 aa11,81□□□□□ -0,52
Trim33-201ENSMUST00000029444 Pdzd2E9Q1M1 2796 aa11,81□□□□□ -0,52
Trim33-201ENSMUST00000029444 Gm7138L7N2C3 230 aa11,75□□□□□ -0,53
Trim33-201ENSMUST00000029444 Gm3238W4VSP7 230 aa11,75□□□□□ -0,53
Trim33-201ENSMUST00000029444 Tenm1Q9WTS4 2731 aa11,73□□□□□ -0,53
Trim33-201ENSMUST00000029444 Krtap14O08640 167 aa11,73□□□□□ -0,53
Trim33-201ENSMUST00000029444 Myo15bI7HPW8 3033 aa11,73□□□□□ -0,53
Trim33-201ENSMUST00000029444 D6Ertd527eA0A0N4SWI3 464 aa11,71□□□□□ -0,53
Trim33-201ENSMUST00000029444 Tnp2P11378 117 aa11,71□□□□□ -0,53
Trim33-201ENSMUST00000029444 FlncQ8VHX6 2726 aaKnown RBP11,7□□□□□ -0,54
Trim33-201ENSMUST00000029444 Krtap13O88375 197 aa11,7□□□□□ -0,54
Trim33-201ENSMUST00000029444 Vps13aQ5H8C4 3166 aa11,67□□□□□ -0,54
Trim33-201ENSMUST00000029444 Lelp1Q9DAE3 120 aa11,65□□□□□ -0,54
Trim33-201ENSMUST00000029444 Rev3lQ61493 3122 aa11,65□□□□□ -0,55
Trim33-201ENSMUST00000029444 FryE9Q8I9 3020 aa11,63□□□□□ -0,55
Trim33-201ENSMUST00000029444 Wdfy4E9Q2M9 3149 aa11,6□□□□□ -0,55
Trim33-201ENSMUST00000029444 Nf1Q04690 2841 aa11,59□□□□□ -0,55
Trim33-201ENSMUST00000029444 Usp34Q6ZQ93 3582 aa11,58□□□□□ -0,56
Trim33-201ENSMUST00000029444 Gm9508A0A1W2P7W0 230 aa11,55□□□□□ -0,56
Trim33-201ENSMUST00000029444 Gm7173A0A0G2JEB6 3132 aa11,55□□□□□ -0,56
Trim33-201ENSMUST00000029444 Chd9Q8BYH8 2885 aa11,54□□□□□ -0,56
Trim33-201ENSMUST00000029444 Cfap54Q8C6S9 3106 aa11,52□□□□□ -0,57
Trim33-201ENSMUST00000029444 TrioQ0KL02 3102 aa11,5□□□□□ -0,57
Trim33-201ENSMUST00000029444 Gm7137J3QMW1 236 aa11,47□□□□□ -0,57
Trim33-201ENSMUST00000029444 AtmQ62388 3066 aa11,44□□□□□ -0,58
Trim33-201ENSMUST00000029444 2310061N02RikQ9D6S9 174 aa11,42□□□□□ -0,58
Trim33-201ENSMUST00000029444 Mki67E9PVX6 3177 aaKnown RBP11,41□□□□□ -0,58
Trim33-201ENSMUST00000029444 Lama3Q61789 3330 aa11,36□□□□□ -0,59
Trim33-201ENSMUST00000029444 LrbaQ9ESE1 2856 aa11,33□□□□□ -0,6
Trim33-201ENSMUST00000029444 NbeaQ9EPN1 2936 aa11,33□□□□□ -0,6
Trim33-201ENSMUST00000029444 Lama1P19137 3084 aa11,31□□□□□ -0,6
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms