RNA–Protein interactions for RNA: ENSMUST00000029444.12

Trim33-201, Transcript of E3 ubiquitin-protein ligase TRIM33, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim33, Length 8,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33-201ENSMUST00000029444 Gm37013Q8K491 104 aa12.99□□□□□ -0.33
Trim33-201ENSMUST00000029444 Rpl37Q9D823 97 aa12.94□□□□□ -0.34
Trim33-201ENSMUST00000029444 Jbts17Q8CE72 3214 aa12.92□□□□□ -0.34
Trim33-201ENSMUST00000029444 Stab2Q8R4U0 2559 aa12.9□□□□□ -0.34
Trim33-201ENSMUST00000029444 Gm3646F6S692 53 aa12.89□□□□□ -0.35
Trim33-201ENSMUST00000029444 Gm10139O88245 57 aa12.89□□□□□ -0.35
Trim33-201ENSMUST00000029444 Gm11565A2A4M7 156 aa12.89□□□□□ -0.35
Trim33-201ENSMUST00000029444 Sec61bQ9CQS8 96 aaKnown RBP12.88□□□□□ -0.35
Trim33-201ENSMUST00000029444 Golgb1E9PVZ8 3238 aa12.87□□□□□ -0.35
Trim33-201ENSMUST00000029444 Ep400Q8CHI8 3072 aaKnown RBP12.86□□□□□ -0.35
Trim33-201ENSMUST00000029444 SrcapA0A087WQ44 3271 aa12.86□□□□□ -0.35
Trim33-201ENSMUST00000029444 Itpr1P11881 2749 aa12.84□□□□□ -0.35
Trim33-201ENSMUST00000029444 Pkd1l1Q8R526 2615 aa12.83□□□□□ -0.36
Trim33-201ENSMUST00000029444 Dnah12Q3V0Q1 3086 aa12.82□□□□□ -0.36
Trim33-201ENSMUST00000029444 Gm16253D3Z167 63 aa12.81□□□□□ -0.36
Trim33-201ENSMUST00000029444 Gm42715A0A087WP63 3095 aaKnown RBP12.77□□□□□ -0.37
Trim33-201ENSMUST00000029444 Gm10320E9PW43 113 aa12.77□□□□□ -0.37
Trim33-201ENSMUST00000029444 Itpr2Q9Z329 2701 aa12.77□□□□□ -0.37
Trim33-201ENSMUST00000029444 1700042G07RikB1AUF7 90 aa12.74□□□□□ -0.37
Trim33-201ENSMUST00000029444 Utp20Q5XG71 2788 aaKnown RBP12.72□□□□□ -0.37
Trim33-201ENSMUST00000029444 BC029722A0A0N4SW31 51 aa12.72□□□□□ -0.37
Trim33-201ENSMUST00000029444 ApcQ61315 2845 aa12.71□□□□□ -0.37
Trim33-201ENSMUST00000029444 Cox6b2Q80ZN9 88 aa12.7□□□□□ -0.38
Trim33-201ENSMUST00000029444 Tnrc18Q80WC3 2878 aa12.7□□□□□ -0.38
Trim33-201ENSMUST00000029444 Sprr1aQ62266 144 aa12.69□□□□□ -0.38
Trim33-201ENSMUST00000029444 Gm10382Q3V0T5 144 aa12.68□□□□□ -0.38
Trim33-201ENSMUST00000029444 Krtap15-1Q9QZU5 150 aa12.61□□□□□ -0.39
Trim33-201ENSMUST00000029444 Cep350E9Q309 3095 aa12.61□□□□□ -0.39
Trim33-201ENSMUST00000029444 Tex15F8VPN2 2785 aa12.56□□□□□ -0.4
Trim33-201ENSMUST00000029444 Nbeal2Q6ZQA0 2742 aa12.54□□□□□ -0.4
Trim33-201ENSMUST00000029444 Gm5767A0A0J9YTU8 78 aa12.54□□□□□ -0.4
Trim33-201ENSMUST00000029444 Ubr5Q80TP3 2792 aa12.54□□□□□ -0.4
Trim33-201ENSMUST00000029444 4933415A04RikQ9D443 101 aa12.53□□□□□ -0.4
Trim33-201ENSMUST00000029444 Prune2Q52KR3 3084 aa12.53□□□□□ -0.4
Trim33-201ENSMUST00000029444 Gm19426M0QWC7 77 aa12.52□□□□□ -0.4
Trim33-201ENSMUST00000029444 Gm3250E9Q1M3 230 aa12.51□□□□□ -0.41
Trim33-201ENSMUST00000029444 A730071L15RikQ8C4X0 137 aa12.5□□□□□ -0.41
Trim33-201ENSMUST00000029444 Krtap29-1A2A5X4 342 aa12.48□□□□□ -0.41
Trim33-201ENSMUST00000029444 Rps29P62274 56 aa12.48□□□□□ -0.41
Trim33-201ENSMUST00000029444 Cystm1Q8K353 104 aa12.47□□□□□ -0.41
Trim33-201ENSMUST00000029444 Ash1lQ99MY8 2958 aa12.39□□□□□ -0.43
Trim33-201ENSMUST00000029444 Gm40193A0A1B0GT39 78 aa12.27□□□□□ -0.45
Trim33-201ENSMUST00000029444 Ndufaf8A2AMZ4 74 aa12.26□□□□□ -0.45
Trim33-201ENSMUST00000029444 Srrm2Q8BTI8 2703 aaKnown RBP12.23□□□□□ -0.45
Trim33-201ENSMUST00000029444 Muc2Q80Z19 2680 aa12.23□□□□□ -0.45
Trim33-201ENSMUST00000029444 MgaA2AWL7 3003 aaKnown RBP12.21□□□□□ -0.45
Trim33-201ENSMUST00000029444 Dmxl1Q6PNC0 3013 aa12.21□□□□□ -0.45
Trim33-201ENSMUST00000029444 2310050C09RikG5E8Z3 280 aa12.2□□□□□ -0.46
Trim33-201ENSMUST00000029444 Gm2310J3QNJ2 377 aa12.15□□□□□ -0.46
Trim33-201ENSMUST00000029444 Fbn2Q61555 2907 aa12.1□□□□□ -0.47
Trim33-201ENSMUST00000029444 Lama2Q60675 3118 aaKnown RBP12.09□□□□□ -0.47
Trim33-201ENSMUST00000029444 Zzef1Q5SSH7 2924 aa12.09□□□□□ -0.47
Trim33-201ENSMUST00000029444 Bod1lE9Q6J5 3032 aa12.06□□□□□ -0.48
Trim33-201ENSMUST00000029444 FrylF8VQ05 3007 aa12.05□□□□□ -0.48
Trim33-201ENSMUST00000029444 FcgbpE9Q0B5 2583 aa12.05□□□□□ -0.48
Trim33-201ENSMUST00000029444 SmcpP15265 143 aa12.01□□□□□ -0.49
Trim33-201ENSMUST00000029444 TgO08710 2766 aa12.01□□□□□ -0.49
Trim33-201ENSMUST00000029444 Hivep1Q03172 2688 aa11.98□□□□□ -0.49
Trim33-201ENSMUST00000029444 KalrnA2CG49 2964 aa11.97□□□□□ -0.49
Trim33-201ENSMUST00000029444 Tnp1P10856 55 aa11.97□□□□□ -0.49
Trim33-201ENSMUST00000029444 DspE9Q557 2883 aaKnown RBP11.95□□□□□ -0.5
Trim33-201ENSMUST00000029444 Ranbp2Q9ERU9 3053 aaKnown RBP11.94□□□□□ -0.5
Trim33-201ENSMUST00000029444 Gm17349F7BGH6 99 aa11.91□□□□□ -0.5
Trim33-201ENSMUST00000029444 Chd7A2AJK6 2986 aaKnown RBP11.91□□□□□ -0.5
Trim33-201ENSMUST00000029444 BptfA2A654 3036 aaKnown RBP11.89□□□□□ -0.51
Trim33-201ENSMUST00000029444 UtrnE9Q6R7 3430 aa11.89□□□□□ -0.51
Trim33-201ENSMUST00000029444 Gm9112A2AI92 75 aa11.88□□□□□ -0.51
Trim33-201ENSMUST00000029444 Gm3233E9Q2H5 230 aa11.87□□□□□ -0.51
Trim33-201ENSMUST00000029444 Igfn1Q3KNY0 2849 aa11.87□□□□□ -0.51
Trim33-201ENSMUST00000029444 Gm21887J3QQ04 176 aa11.81□□□□□ -0.52
Trim33-201ENSMUST00000029444 Pdzd2E9Q1M1 2796 aa11.81□□□□□ -0.52
Trim33-201ENSMUST00000029444 Gm7138L7N2C3 230 aa11.75□□□□□ -0.53
Trim33-201ENSMUST00000029444 Gm3238W4VSP7 230 aa11.75□□□□□ -0.53
Trim33-201ENSMUST00000029444 Tenm1Q9WTS4 2731 aa11.73□□□□□ -0.53
Trim33-201ENSMUST00000029444 Krtap14O08640 167 aa11.73□□□□□ -0.53
Trim33-201ENSMUST00000029444 Myo15bI7HPW8 3033 aa11.73□□□□□ -0.53
Trim33-201ENSMUST00000029444 D6Ertd527eA0A0N4SWI3 464 aa11.71□□□□□ -0.53
Trim33-201ENSMUST00000029444 Tnp2P11378 117 aa11.71□□□□□ -0.53
Trim33-201ENSMUST00000029444 FlncQ8VHX6 2726 aaKnown RBP11.7□□□□□ -0.54
Trim33-201ENSMUST00000029444 Krtap13O88375 197 aa11.7□□□□□ -0.54
Trim33-201ENSMUST00000029444 Vps13aQ5H8C4 3166 aa11.67□□□□□ -0.54
Trim33-201ENSMUST00000029444 Lelp1Q9DAE3 120 aa11.65□□□□□ -0.54
Trim33-201ENSMUST00000029444 Rev3lQ61493 3122 aa11.65□□□□□ -0.55
Trim33-201ENSMUST00000029444 FryE9Q8I9 3020 aa11.63□□□□□ -0.55
Trim33-201ENSMUST00000029444 Wdfy4E9Q2M9 3149 aa11.6□□□□□ -0.55
Trim33-201ENSMUST00000029444 Nf1Q04690 2841 aa11.59□□□□□ -0.55
Trim33-201ENSMUST00000029444 Usp34Q6ZQ93 3582 aa11.58□□□□□ -0.56
Trim33-201ENSMUST00000029444 Gm9508A0A1W2P7W0 230 aa11.55□□□□□ -0.56
Trim33-201ENSMUST00000029444 Gm7173A0A0G2JEB6 3132 aa11.55□□□□□ -0.56
Trim33-201ENSMUST00000029444 Chd9Q8BYH8 2885 aa11.54□□□□□ -0.56
Trim33-201ENSMUST00000029444 Cfap54Q8C6S9 3106 aa11.52□□□□□ -0.57
Trim33-201ENSMUST00000029444 TrioQ0KL02 3102 aa11.5□□□□□ -0.57
Trim33-201ENSMUST00000029444 Gm7137J3QMW1 236 aa11.47□□□□□ -0.57
Trim33-201ENSMUST00000029444 AtmQ62388 3066 aa11.44□□□□□ -0.58
Trim33-201ENSMUST00000029444 2310061N02RikQ9D6S9 174 aa11.42□□□□□ -0.58
Trim33-201ENSMUST00000029444 Mki67E9PVX6 3177 aaKnown RBP11.41□□□□□ -0.58
Trim33-201ENSMUST00000029444 Lama3Q61789 3330 aa11.36□□□□□ -0.59
Trim33-201ENSMUST00000029444 LrbaQ9ESE1 2856 aa11.33□□□□□ -0.6
Trim33-201ENSMUST00000029444 NbeaQ9EPN1 2936 aa11.33□□□□□ -0.6
Trim33-201ENSMUST00000029444 Lama1P19137 3084 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms