RNA–Protein interactions for RNA: ENSMUST00000029444.12

Trim33-201, Transcript of E3 ubiquitin-protein ligase TRIM33, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim33, Length 8,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33-201ENSMUST00000029444 Rhox8Q6VSS7 320 aa35,31■■■■□ 3,24
Trim33-201ENSMUST00000029444 Rpgrip1Q9EPQ2 1331 aa34,53■■■■□ 3,12
Trim33-201ENSMUST00000029444 Cngb1E1AZ71 1325 aa33,98■■■■□ 3,03
Trim33-201ENSMUST00000029444 Las1lA2BE28 776 aaKnown RBP33,54■■■□□ 2,96
Trim33-201ENSMUST00000029444 Pelp1Q9DBD5 1123 aaKnown RBP33,46■■■□□ 2,95
Trim33-201ENSMUST00000029444 Wdr66E9Q743 1299 aa32,06■■■□□ 2,72
Trim33-201ENSMUST00000029444 Rtl1Q7M732 1744 aa31,98■■■□□ 2,71
Trim33-201ENSMUST00000029444 Stra8P70278 393 aa31,58■■■□□ 2,65
Trim33-201ENSMUST00000029444 Ube2uB1AUC4 352 aa31,54■■■□□ 2,64
Trim33-201ENSMUST00000029444 CenpbP27790 599 aa31,4■■■□□ 2,62
Trim33-201ENSMUST00000029444 Esf1Q3V1V3 845 aaKnown RBP31,36■■■□□ 2,61
Trim33-201ENSMUST00000029444 Amer1Q7TS75 1132 aa31,31■■■□□ 2,6
Trim33-201ENSMUST00000029444 Ehmt2Q9Z148 1263 aaKnown RBP31,28■■■□□ 2,6
Trim33-201ENSMUST00000029444 Ccdc180J3QNE4 1664 aa31,26■■■□□ 2,59
Trim33-201ENSMUST00000029444 4930567H17RikQ3V0K5 233 aa31,22■■■□□ 2,59
Trim33-201ENSMUST00000029444 Trim41Q5NCC3 630 aa31,15■■■□□ 2,58
Trim33-201ENSMUST00000029444 Zeb1Q64318 1117 aa31,13■■■□□ 2,57
Trim33-201ENSMUST00000029444 Myt1Q8CFC2 1127 aa31,09■■■□□ 2,57
Trim33-201ENSMUST00000029444 NefmP08553 848 aa30,94■■■□□ 2,54
Trim33-201ENSMUST00000029444 Npm2Q80W85 207 aa30,92■■■□□ 2,54
Trim33-201ENSMUST00000029444 Ccdc136Q3TVA9 1136 aa30,81■■■□□ 2,52
Trim33-201ENSMUST00000029444 Acin1Q9JIX8 1338 aaKnown RBP30,52■■■□□ 2,48
Trim33-201ENSMUST00000029444 NischQ80TM9 1593 aa30,45■■■□□ 2,46
Trim33-201ENSMUST00000029444 Gab3Q8BSM5 595 aa30,36■■■□□ 2,45
Trim33-201ENSMUST00000029444 Tnnt3Q9QZ47 272 aa30,34■■■□□ 2,45
Trim33-201ENSMUST00000029444 Anp32bQ9EST5 272 aaKnown RBP30,32■■■□□ 2,44
Trim33-201ENSMUST00000029444 Myt1lP97500 1187 aa30,28■■■□□ 2,44
Trim33-201ENSMUST00000029444 NeflP08551 543 aa30,19■■■□□ 2,42
Trim33-201ENSMUST00000029444 Rtl5Q5DTT4 599 aa30,16■■■□□ 2,42
Trim33-201ENSMUST00000029444 4933416C03RikQ3V063 378 aa29,99■■■□□ 2,39
Trim33-201ENSMUST00000029444 Cdk11bP24788 784 aaKnown RBP29,98■■■□□ 2,39
Trim33-201ENSMUST00000029444 NrdcQ8BHG1 1161 aa29,94■■■□□ 2,38
Trim33-201ENSMUST00000029444 UbtfP25976 765 aaKnown RBP29,79■■■□□ 2,36
Trim33-201ENSMUST00000029444 Slc24a1Q91WD8 1130 aa29,79■■■□□ 2,36
Trim33-201ENSMUST00000029444 Ttbk1Q6PCN3 1308 aa29,65■■■□□ 2,34
Trim33-201ENSMUST00000029444 HrcG5E8J6 738 aa29,62■■■□□ 2,33
Trim33-201ENSMUST00000029444 Nop58Q6DFW4 536 aaKnown RBP29,41■■■□□ 2,3
Trim33-201ENSMUST00000029444 NclP09405 707 aaKnown RBP29,36■■■□□ 2,29
Trim33-201ENSMUST00000029444 Neurod1Q60867 357 aa29,15■■■□□ 2,26
Trim33-201ENSMUST00000029444 Os9Q8K2C7 672 aa29,13■■■□□ 2,25
Trim33-201ENSMUST00000029444 Pcgf6Q99NA9 353 aa29,12■■■□□ 2,25
Trim33-201ENSMUST00000029444 Fam50aQ9WV03 339 aaKnown RBP29,04■■■□□ 2,24
Trim33-201ENSMUST00000029444 TonslQ6NZL6 1363 aa29,04■■■□□ 2,24
Trim33-201ENSMUST00000029444 Hdac5Q9Z2V6 1113 aa28,96■■■□□ 2,23
Trim33-201ENSMUST00000029444 Eif5bQ05D44 1216 aaKnown RBP28,95■■■□□ 2,22
Trim33-201ENSMUST00000029444 Anp32aO35381 247 aa28,83■■■□□ 2,21
Trim33-201ENSMUST00000029444 Il27Q8K3I6 234 aa28,66■■■□□ 2,18
Trim33-201ENSMUST00000029444 DiexfQ8BTT6 772 aaKnown RBP28,63■■■□□ 2,17
Trim33-201ENSMUST00000029444 DaxxO35613 739 aa28,61■■■□□ 2,17
Trim33-201ENSMUST00000029444 ClspnQ80YR7 1315 aa28,57■■■□□ 2,16
Trim33-201ENSMUST00000029444 Zcchc6Q5BLK4 1491 aaKnown RBP28,55■■■□□ 2,16
Trim33-201ENSMUST00000029444 Ccdc9Q8VC31 543 aaKnown RBP28,5■■■□□ 2,15
Trim33-201ENSMUST00000029444 Ythdc1E9Q5K9 736 aaKnown RBP28,43■■■□□ 2,14
Trim33-201ENSMUST00000029444 Upf2A2AT37 1269 aaKnown RBP28,34■■■□□ 2,13
Trim33-201ENSMUST00000029444 Ap3b1Q9Z1T1 1105 aa28,33■■■□□ 2,13
Trim33-201ENSMUST00000029444 Nlrp6Q91WS2 869 aa28,3■■■□□ 2,12
Trim33-201ENSMUST00000029444 CatipB9EKE5 520 aa28,25■■■□□ 2,11
Trim33-201ENSMUST00000029444 Supt5hO55201 1082 aaKnown RBP28,25■■■□□ 2,11
Trim33-201ENSMUST00000029444 Ccer2J3QPU5 274 aa28,13■■■□□ 2,09
Trim33-201ENSMUST00000029444 Mier1Q5UAK0 511 aa28,09■■■□□ 2,09
Trim33-201ENSMUST00000029444 Hsp90aa1P07901 733 aaKnown RBP28,07■■■□□ 2,08
Trim33-201ENSMUST00000029444 Gm13697A2AK42 830 aa28,07■■■□□ 2,08
Trim33-201ENSMUST00000029444 Abcc9P70170 1546 aa27,98■■■□□ 2,07
Trim33-201ENSMUST00000029444 Hnrnpul2Q00PI9 745 aaKnown RBP27,91■■■□□ 2,06
Trim33-201ENSMUST00000029444 Npm1Q61937 292 aaKnown RBP27,9■■■□□ 2,06
Trim33-201ENSMUST00000029444 Aplp2Q06335 707 aa27,87■■■□□ 2,05
Trim33-201ENSMUST00000029444 Anks4bQ8K3X6 423 aa27,85■■■□□ 2,05
Trim33-201ENSMUST00000029444 Dcaf1Q80TR8 1506 aa27,79■■■□□ 2,04
Trim33-201ENSMUST00000029444 Polr3glQ8R0C0 218 aa27,77■■■□□ 2,04
Trim33-201ENSMUST00000029444 Trim44Q9QXA7 346 aa27,75■■■□□ 2,03
Trim33-201ENSMUST00000029444 Brd4Q9ESU6 1400 aaKnown RBP27,72■■■□□ 2,03
Trim33-201ENSMUST00000029444 Atp1b4Q99ME6 356 aa27,71■■■□□ 2,03
Trim33-201ENSMUST00000029444 Gm13695A2AK44 830 aa27,68■■■□□ 2,02
Trim33-201ENSMUST00000029444 Ppargc1bQ8VHJ7 1014 aa27,67■■■□□ 2,02
Trim33-201ENSMUST00000029444 Calr4Q3TQS0 420 aa27,65■■■□□ 2,02
Trim33-201ENSMUST00000029444 Adam1bQ8R534 806 aa27,64■■■□□ 2,02
Trim33-201ENSMUST00000029444 Erich6D3Z6S9 713 aa27,6■■■□□ 2,01
Trim33-201ENSMUST00000029444 Gm35339A0A140LHH9 1649 aa27,59■■■□□ 2,01
Trim33-201ENSMUST00000029444 Clstn2Q9ER65 966 aa27,53■■■□□ 2
Trim33-201ENSMUST00000029444 Cep164Q5DU05 1446 aa27,52■■■□□ 2
Trim33-201ENSMUST00000029444 Plekhg3Q4VAC9 1341 aa27,52■■■□□ 2
Trim33-201ENSMUST00000029444 Wdr43Q6ZQL4 677 aaKnown RBP27,52■■■□□ 2
Trim33-201ENSMUST00000029444 Zbtb7cQ8VCZ7 619 aa27,51■■□□□ 1,99
Trim33-201ENSMUST00000029444 Htatsf1Q8BGC0 757 aa27,49■■□□□ 1,99
Trim33-201ENSMUST00000029444 Lmod2Q3UHZ5 550 aa27,47■■□□□ 1,99
Trim33-201ENSMUST00000029444 Chic1Q8CBW7 227 aa27,47■■□□□ 1,99
Trim33-201ENSMUST00000029444 Clip1Q922J3 1391 aa27,46■■□□□ 1,99
Trim33-201ENSMUST00000029444 DekQ7TNV0 380 aaKnown RBP27,45■■□□□ 1,98
Trim33-201ENSMUST00000029444 Ppp4r2Q0VGB7 417 aa27,43■■□□□ 1,98
Trim33-201ENSMUST00000029444 ArxO35085 564 aa27,39■■□□□ 1,98
Trim33-201ENSMUST00000029444 Chmp4bQ9D8B3 224 aaKnown RBP27,35■■□□□ 1,97
Trim33-201ENSMUST00000029444 Lmod3E9QA62 571 aa27,33■■□□□ 1,97
Trim33-201ENSMUST00000029444 Fgd1P52734 960 aa27,32■■□□□ 1,96
Trim33-201ENSMUST00000029444 Zfp777B9EKF4 885 aa27,29■■□□□ 1,96
Trim33-201ENSMUST00000029444 Znf326O88291 580 aa27,28■■□□□ 1,96
Trim33-201ENSMUST00000029444 Hsp90ab1P11499 724 aaKnown RBP27,22■■□□□ 1,95
Trim33-201ENSMUST00000029444 Rb1cc1Q9ESK9 1588 aa27,22■■□□□ 1,95
Trim33-201ENSMUST00000029444 PtmaP26350 111 aa27,2■■□□□ 1,94
Trim33-201ENSMUST00000029444 Csrnp3P59055 597 aa27,15■■□□□ 1,94
Trim33-201ENSMUST00000029444 Zbtb4Q5F293 982 aa27,14■■□□□ 1,94
Retrieved 100 of 22,080 RNA–protein pairs in 19,4 ms