RNA–Protein interactions for RNA: ENSMUST00000028386.11

Nckap1-201, Transcript of Nck-associated protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nckap1, Length 4,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-201ENSMUST00000028386 Trank1Q8BV79 2999 aa13,9□□□□□ -0,18
Nckap1-201ENSMUST00000028386 Gm17689B3GLJ4 109 aa13,9□□□□□ -0,18
Nckap1-201ENSMUST00000028386 Gm10570F6VB42 170 aa13,89□□□□□ -0,19
Nckap1-201ENSMUST00000028386 Sprr1bQ62267 153 aa13,89□□□□□ -0,19
Nckap1-201ENSMUST00000028386 4930518I15RikQ3V2W7 57 aa13,88□□□□□ -0,19
Nckap1-201ENSMUST00000028386 Nf1Q04690 2841 aa13,88□□□□□ -0,19
Nckap1-201ENSMUST00000028386 Rpl37aP61514 92 aa13,87□□□□□ -0,19
Nckap1-201ENSMUST00000028386 Ighv2-2A0A075B5P8 116 aa13,83□□□□□ -0,2
Nckap1-201ENSMUST00000028386 P01821 116 aa13,83□□□□□ -0,2
Nckap1-201ENSMUST00000028386 Igkv8-19A0A0G2JFN8 121 aa13,82□□□□□ -0,2
Nckap1-201ENSMUST00000028386 Ndufb1P0DN34 57 aa13,82□□□□□ -0,2
Nckap1-201ENSMUST00000028386 RelnQ60841 3461 aa13,8□□□□□ -0,2
Nckap1-201ENSMUST00000028386 Serp1Q9Z1W5 66 aa13,8□□□□□ -0,2
Nckap1-201ENSMUST00000028386 Gm27235Q3UW50 83 aa13,78□□□□□ -0,2
Nckap1-201ENSMUST00000028386 Gm36176A0A1W2P8D5 158 aa13,77□□□□□ -0,21
Nckap1-201ENSMUST00000028386 9230102O04RikA2ASX7 82 aa13,76□□□□□ -0,21
Nckap1-201ENSMUST00000028386 LrbaQ9ESE1 2856 aa13,74□□□□□ -0,21
Nckap1-201ENSMUST00000028386 Sox16Q62247 57 aa13,73□□□□□ -0,21
Nckap1-201ENSMUST00000028386 Myo15aQ9QZZ4 3511 aa13,73□□□□□ -0,21
Nckap1-201ENSMUST00000028386 Gm10160F6Y577 67 aa13,72□□□□□ -0,21
Nckap1-201ENSMUST00000028386 Phxr5P08399 672 aa13,72□□□□□ -0,21
Nckap1-201ENSMUST00000028386 Anapc11Q9CPX9 84 aa13,72□□□□□ -0,21
Nckap1-201ENSMUST00000028386 Defb9Q8R2I6 67 aa13,71□□□□□ -0,21
Nckap1-201ENSMUST00000028386 Gm10197F6QEY5 67 aa13,71□□□□□ -0,22
Nckap1-201ENSMUST00000028386 Gm10308Q9CVR5 141 aa13,7□□□□□ -0,22
Nckap1-201ENSMUST00000028386 Bean1Q9EQG5 255 aa13,7□□□□□ -0,22
Nckap1-201ENSMUST00000028386 Smim29Q8R043 75 aa13,68□□□□□ -0,22
Nckap1-201ENSMUST00000028386 A330070K13RikQ8CA53 115 aa13,67□□□□□ -0,22
Nckap1-201ENSMUST00000028386 Krtap16-1A2A5X5 502 aa13,67□□□□□ -0,22
Nckap1-201ENSMUST00000028386 Gm10999F6Q4M4 69 aa13,67□□□□□ -0,22
Nckap1-201ENSMUST00000028386 7530416G11RikJ3QJX6 159 aa13,65□□□□□ -0,22
Nckap1-201ENSMUST00000028386 H2al1mQ9DAD9 105 aa13,65□□□□□ -0,22
Nckap1-201ENSMUST00000028386 A930002H24RikQ8C8Y3 163 aa13,64□□□□□ -0,23
Nckap1-201ENSMUST00000028386 Gm11213A0A1B0GR83 88 aa13,62□□□□□ -0,23
Nckap1-201ENSMUST00000028386 Wdfy3Q6VNB8 3508 aa13,62□□□□□ -0,23
Nckap1-201ENSMUST00000028386 FcgbpE9Q0B5 2583 aa13,59□□□□□ -0,23
Nckap1-201ENSMUST00000028386 H2al1kJ3QP08 105 aa13,58□□□□□ -0,23
Nckap1-201ENSMUST00000028386 Tenm4Q3UHK6 2771 aa13,56□□□□□ -0,24
Nckap1-201ENSMUST00000028386 CnbpP53996 178 aaKnown RBP13,56□□□□□ -0,24
Nckap1-201ENSMUST00000028386 AW011738F6S7Q2 159 aa13,56□□□□□ -0,24
Nckap1-201ENSMUST00000028386 Gm7276Q3TYW4 209 aa13,54□□□□□ -0,24
Nckap1-201ENSMUST00000028386 Pdzd2E9Q1M1 2796 aa13,53□□□□□ -0,24
Nckap1-201ENSMUST00000028386 Gm10337F7DEP7 55 aa13,53□□□□□ -0,24
Nckap1-201ENSMUST00000028386 Prr13Q9CQJ5 137 aa13,53□□□□□ -0,24
Nckap1-201ENSMUST00000028386 Gm9508A0A1W2P7W0 230 aa13,48□□□□□ -0,25
Nckap1-201ENSMUST00000028386 A530084C06RikQ3UTW2 186 aa13,48□□□□□ -0,25
Nckap1-201ENSMUST00000028386 Defb1P56386 69 aa13,47□□□□□ -0,25
Nckap1-201ENSMUST00000028386 Spint4Q9D263 159 aa13,47□□□□□ -0,25
Nckap1-201ENSMUST00000028386 Q8BGJ3 129 aa13,45□□□□□ -0,26
Nckap1-201ENSMUST00000028386 Tenm3Q9WTS6 2715 aa13,45□□□□□ -0,26
Nckap1-201ENSMUST00000028386 Gm10320E9PW43 113 aa13,45□□□□□ -0,26
Nckap1-201ENSMUST00000028386 Gm17349F7BGH6 99 aa13,43□□□□□ -0,26
Nckap1-201ENSMUST00000028386 OxtP35454 125 aa13,42□□□□□ -0,26
Nckap1-201ENSMUST00000028386 Zcchc13Q9D548 170 aa13,41□□□□□ -0,26
Nckap1-201ENSMUST00000028386 Helz2E9QAM5 2947 aaKnown RBP13,41□□□□□ -0,26
Nckap1-201ENSMUST00000028386 Fam104aA2A6P4 185 aa13,38□□□□□ -0,27
Nckap1-201ENSMUST00000028386 Fam229bQ8CF36 80 aa13,38□□□□□ -0,27
Nckap1-201ENSMUST00000028386 Cypt15B1AXS0 87 aa13,38□□□□□ -0,27
Nckap1-201ENSMUST00000028386 Gm17606F6ZL36 78 aa13,35□□□□□ -0,27
Nckap1-201ENSMUST00000028386 ApcQ61315 2845 aa13,34□□□□□ -0,27
Nckap1-201ENSMUST00000028386 Akap9Q70FJ1 3797 aa13,32□□□□□ -0,28
Nckap1-201ENSMUST00000028386 Srrm2Q8BTI8 2703 aaKnown RBP13,32□□□□□ -0,28
Nckap1-201ENSMUST00000028386 Coa5Q99M07 74 aa13,31□□□□□ -0,28
Nckap1-201ENSMUST00000028386 Muc5acE9QAQ8 3455 aa13,3□□□□□ -0,28
Nckap1-201ENSMUST00000028386 DmdP11531 3678 aa13,29□□□□□ -0,28
Nckap1-201ENSMUST00000028386 Gm20661K7N787 53 aa13,28□□□□□ -0,28
Nckap1-201ENSMUST00000028386 4930507D05RikQ8C9C9 103 aa13,27□□□□□ -0,28
Nckap1-201ENSMUST00000028386 Rps28P62858 69 aaKnown RBP13,25□□□□□ -0,29
Nckap1-201ENSMUST00000028386 TgO08710 2766 aa13,22□□□□□ -0,29
Nckap1-201ENSMUST00000028386 Gm10065F6TJM2 114 aa13,19□□□□□ -0,3
Nckap1-201ENSMUST00000028386 Cdc42se1Q8BHL7 80 aa13,18□□□□□ -0,3
Nckap1-201ENSMUST00000028386 NbdyA0A0N4SUI7 68 aa13,17□□□□□ -0,3
Nckap1-201ENSMUST00000028386 Chtf8P0CG14 533 aa13,16□□□□□ -0,3
Nckap1-201ENSMUST00000028386 Limd2Q8BGB5 128 aa13,11□□□□□ -0,31
Nckap1-201ENSMUST00000028386 Sprr1aQ62266 144 aa13,09□□□□□ -0,31
Nckap1-201ENSMUST00000028386 Gm9507D3Z5T3 223 aa13,07□□□□□ -0,32
Nckap1-201ENSMUST00000028386 6030445D17RikE9Q8F9 148 aa13,06□□□□□ -0,32
Nckap1-201ENSMUST00000028386 Cypt14J3QPF7 87 aa13,06□□□□□ -0,32
Nckap1-201ENSMUST00000028386 Cystm1Q8K353 104 aa13,01□□□□□ -0,33
Nckap1-201ENSMUST00000028386 Phxr4P15974 95 aa13□□□□□ -0,33
Nckap1-201ENSMUST00000028386 Gm26620Q9CY65 116 aa13□□□□□ -0,33
Nckap1-201ENSMUST00000028386 Tenm1Q9WTS4 2731 aa12,98□□□□□ -0,33
Nckap1-201ENSMUST00000028386 OtogO55225 2910 aa12,98□□□□□ -0,33
Nckap1-201ENSMUST00000028386 Krtap10-4Q08EG8 221 aa12,92□□□□□ -0,34
Nckap1-201ENSMUST00000028386 A730071L15RikQ8C4X0 137 aa12,92□□□□□ -0,34
Nckap1-201ENSMUST00000028386 Gm10139O88245 57 aa12,92□□□□□ -0,34
Nckap1-201ENSMUST00000028386 2310034C09RikQ9D746 214 aa12,9□□□□□ -0,34
Nckap1-201ENSMUST00000028386 Gm12216A0A1W2P827 62 aa12,9□□□□□ -0,34
Nckap1-201ENSMUST00000028386 Odf3bQ5M8M2 238 aa12,9□□□□□ -0,34
Nckap1-201ENSMUST00000028386 Vps13cQ8BX70 3748 aa12,9□□□□□ -0,35
Nckap1-201ENSMUST00000028386 Krtap13O88375 197 aa12,88□□□□□ -0,35
Nckap1-201ENSMUST00000028386 SpenQ62504 3644 aaKnown RBP12,83□□□□□ -0,36
Nckap1-201ENSMUST00000028386 Zfhx3Q61329 3726 aa12,82□□□□□ -0,36
Nckap1-201ENSMUST00000028386 Rnase13Q5GAM7 153 aa12,81□□□□□ -0,36
Nckap1-201ENSMUST00000028386 Smg1Q8BKX6 3658 aaKnown RBP12,79□□□□□ -0,36
Nckap1-201ENSMUST00000028386 2310050C09RikG5E8Z3 280 aa12,78□□□□□ -0,36
Nckap1-201ENSMUST00000028386 Uqcr11Q9CPX8 56 aa12,75□□□□□ -0,37
Nckap1-201ENSMUST00000028386 Csmd1Q923L3 3564 aa12,75□□□□□ -0,37
Nckap1-201ENSMUST00000028386 2310061N02RikQ9D6S9 174 aa12,73□□□□□ -0,37
Nckap1-201ENSMUST00000028386 Zfhx4Q9JJN2 3550 aa12,71□□□□□ -0,38
Retrieved 100 of 22,080 RNA–protein pairs in 38,6 ms