RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 6030445D17RikE9Q8F9 148 aa9,18□□□□□ -0,94
Col7a1-201ENSMUST00000026740 Cep350E9Q309 3095 aa9,17□□□□□ -0,94
Col7a1-201ENSMUST00000026740 NbdyA0A0N4SUI7 68 aa9,17□□□□□ -0,94
Col7a1-201ENSMUST00000026740 Utp20Q5XG71 2788 aaKnown RBP9,17□□□□□ -0,94
Col7a1-201ENSMUST00000026740 Gm4491E0CX42 125 aa9,14□□□□□ -0,95
Col7a1-201ENSMUST00000026740 Plac8Q9JI48 112 aa9,14□□□□□ -0,95
Col7a1-201ENSMUST00000026740 Odf3bQ5M8M2 238 aa9,12□□□□□ -0,95
Col7a1-201ENSMUST00000026740 Nbeal2Q6ZQA0 2742 aa9,1□□□□□ -0,95
Col7a1-201ENSMUST00000026740 ApcQ61315 2845 aa9,1□□□□□ -0,95
Col7a1-201ENSMUST00000026740 Fam229aB2KGE5 128 aa9,1□□□□□ -0,95
Col7a1-201ENSMUST00000026740 Anapc11Q9CPX9 84 aa9,09□□□□□ -0,95
Col7a1-201ENSMUST00000026740 Gm3285A0A1W2P7U0 201 aa9,05□□□□□ -0,96
Col7a1-201ENSMUST00000026740 Tex15F8VPN2 2785 aa9,03□□□□□ -0,96
Col7a1-201ENSMUST00000026740 Smim29Q8R043 75 aa9,01□□□□□ -0,97
Col7a1-201ENSMUST00000026740 Sec61bQ9CQS8 96 aaKnown RBP9□□□□□ -0,97
Col7a1-201ENSMUST00000026740 Fam229bQ8CF36 80 aa9□□□□□ -0,97
Col7a1-201ENSMUST00000026740 Romo1P60603 79 aa9□□□□□ -0,97
Col7a1-201ENSMUST00000026740 Ubr5Q80TP3 2792 aa8,98□□□□□ -0,97
Col7a1-201ENSMUST00000026740 Prune2Q52KR3 3084 aa8,97□□□□□ -0,97
Col7a1-201ENSMUST00000026740 Rpl37Q9D823 97 aa8,95□□□□□ -0,98
Col7a1-201ENSMUST00000026740 Gm10320E9PW43 113 aa8,94□□□□□ -0,98
Col7a1-201ENSMUST00000026740 Gm37013Q8K491 104 aa8,94□□□□□ -0,98
Col7a1-201ENSMUST00000026740 Ash1lQ99MY8 2958 aa8,93□□□□□ -0,98
Col7a1-201ENSMUST00000026740 UtrnE9Q6R7 3430 aa8,92□□□□□ -0,98
Col7a1-201ENSMUST00000026740 Lama2Q60675 3118 aaKnown RBP8,91□□□□□ -0,98
Col7a1-201ENSMUST00000026740 Gm10139O88245 57 aa8,89□□□□□ -0,99
Col7a1-201ENSMUST00000026740 Gm3646F6S692 53 aa8,86□□□□□ -0,99
Col7a1-201ENSMUST00000026740 BC029722A0A0N4SW31 51 aa8,85□□□□□ -0,99
Col7a1-201ENSMUST00000026740 Gm16253D3Z167 63 aa8,84□□□□□ -0,99
Col7a1-201ENSMUST00000026740 Krtap15-1Q9QZU5 150 aa8,83□□□□□ -1
Col7a1-201ENSMUST00000026740 Chd7A2AJK6 2986 aaKnown RBP8,83□□□□□ -1
Col7a1-201ENSMUST00000026740 Muc2Q80Z19 2680 aa8,82□□□□□ -1
Col7a1-201ENSMUST00000026740 Gm11565A2A4M7 156 aa8,82□□□□□ -1
Col7a1-201ENSMUST00000026740 Gm10382Q3V0T5 144 aa8,79□□□□□ -1
Col7a1-201ENSMUST00000026740 Fbn2Q61555 2907 aa8,78□□□□□ -1
Col7a1-201ENSMUST00000026740 1700042G07RikB1AUF7 90 aa8,77□□□□□ -1
Col7a1-201ENSMUST00000026740 Gm19426M0QWC7 77 aa8,77□□□□□ -1,01
Col7a1-201ENSMUST00000026740 Gm5767A0A0J9YTU8 78 aa8,76□□□□□ -1,01
Col7a1-201ENSMUST00000026740 Cox6b2Q80ZN9 88 aa8,76□□□□□ -1,01
Col7a1-201ENSMUST00000026740 Sprr1aQ62266 144 aa8,75□□□□□ -1,01
Col7a1-201ENSMUST00000026740 Gm3250E9Q1M3 230 aa8,75□□□□□ -1,01
Col7a1-201ENSMUST00000026740 MgaA2AWL7 3003 aaKnown RBP8,74□□□□□ -1,01
Col7a1-201ENSMUST00000026740 Dmxl1Q6PNC0 3013 aa8,73□□□□□ -1,01
Col7a1-201ENSMUST00000026740 Ranbp2Q9ERU9 3053 aaKnown RBP8,73□□□□□ -1,01
Col7a1-201ENSMUST00000026740 Srrm2Q8BTI8 2703 aaKnown RBP8,72□□□□□ -1,01
Col7a1-201ENSMUST00000026740 TrioQ0KL02 3102 aa8,72□□□□□ -1,01
Col7a1-201ENSMUST00000026740 Zzef1Q5SSH7 2924 aa8,71□□□□□ -1,02
Col7a1-201ENSMUST00000026740 Hivep1Q03172 2688 aa8,69□□□□□ -1,02
Col7a1-201ENSMUST00000026740 Bod1lE9Q6J5 3032 aa8,69□□□□□ -1,02
Col7a1-201ENSMUST00000026740 KalrnA2CG49 2964 aa8,67□□□□□ -1,02
Col7a1-201ENSMUST00000026740 Krtap29-1A2A5X4 342 aa8,65□□□□□ -1,02
Col7a1-201ENSMUST00000026740 FrylF8VQ05 3007 aa8,65□□□□□ -1,02
Col7a1-201ENSMUST00000026740 Vps13aQ5H8C4 3166 aa8,64□□□□□ -1,03
Col7a1-201ENSMUST00000026740 Rps29P62274 56 aa8,63□□□□□ -1,03
Col7a1-201ENSMUST00000026740 Gm7173A0A0G2JEB6 3132 aa8,62□□□□□ -1,03
Col7a1-201ENSMUST00000026740 DspE9Q557 2883 aaKnown RBP8,62□□□□□ -1,03
Col7a1-201ENSMUST00000026740 FcgbpE9Q0B5 2583 aa8,61□□□□□ -1,03
Col7a1-201ENSMUST00000026740 Igfn1Q3KNY0 2849 aa8,59□□□□□ -1,03
Col7a1-201ENSMUST00000026740 Usp34Q6ZQ93 3582 aa8,57□□□□□ -1,04
Col7a1-201ENSMUST00000026740 Mki67E9PVX6 3177 aaKnown RBP8,57□□□□□ -1,04
Col7a1-201ENSMUST00000026740 FlncQ8VHX6 2726 aaKnown RBP8,57□□□□□ -1,04
Col7a1-201ENSMUST00000026740 Myo15bI7HPW8 3033 aa8,56□□□□□ -1,04
Col7a1-201ENSMUST00000026740 4933415A04RikQ9D443 101 aa8,56□□□□□ -1,04
Col7a1-201ENSMUST00000026740 A730071L15RikQ8C4X0 137 aa8,56□□□□□ -1,04
Col7a1-201ENSMUST00000026740 Ndufaf8A2AMZ4 74 aa8,55□□□□□ -1,04
Col7a1-201ENSMUST00000026740 Cystm1Q8K353 104 aa8,54□□□□□ -1,04
Col7a1-201ENSMUST00000026740 Lama3Q61789 3330 aa8,53□□□□□ -1,04
Col7a1-201ENSMUST00000026740 TgO08710 2766 aa8,51□□□□□ -1,05
Col7a1-201ENSMUST00000026740 BptfA2A654 3036 aaKnown RBP8,5□□□□□ -1,05
Col7a1-201ENSMUST00000026740 Cfap54Q8C6S9 3106 aa8,48□□□□□ -1,05
Col7a1-201ENSMUST00000026740 Tenm1Q9WTS4 2731 aa8,47□□□□□ -1,05
Col7a1-201ENSMUST00000026740 2310050C09RikG5E8Z3 280 aa8,47□□□□□ -1,05
Col7a1-201ENSMUST00000026740 Pdzd2E9Q1M1 2796 aa8,47□□□□□ -1,05
Col7a1-201ENSMUST00000026740 Gm40193A0A1B0GT39 78 aa8,46□□□□□ -1,05
Col7a1-201ENSMUST00000026740 FryE9Q8I9 3020 aa8,46□□□□□ -1,06
Col7a1-201ENSMUST00000026740 Rev3lQ61493 3122 aa8,45□□□□□ -1,06
Col7a1-201ENSMUST00000026740 AtmQ62388 3066 aa8,43□□□□□ -1,06
Col7a1-201ENSMUST00000026740 Nf1Q04690 2841 aa8,41□□□□□ -1,06
Col7a1-201ENSMUST00000026740 SmcpP15265 143 aa8,37□□□□□ -1,07
Col7a1-201ENSMUST00000026740 Chd9Q8BYH8 2885 aa8,36□□□□□ -1,07
Col7a1-201ENSMUST00000026740 Gm2310J3QNJ2 377 aa8,35□□□□□ -1,07
Col7a1-201ENSMUST00000026740 Tnp1P10856 55 aa8,33□□□□□ -1,08
Col7a1-201ENSMUST00000026740 Col12a1Q60847 3120 aa8,31□□□□□ -1,08
Col7a1-201ENSMUST00000026740 Gm17349F7BGH6 99 aa8,3□□□□□ -1,08
Col7a1-201ENSMUST00000026740 Wdfy4E9Q2M9 3149 aa8,29□□□□□ -1,08
Col7a1-201ENSMUST00000026740 NbeaQ9EPN1 2936 aa8,29□□□□□ -1,08
Col7a1-201ENSMUST00000026740 Gm3233E9Q2H5 230 aa8,28□□□□□ -1,08
Col7a1-201ENSMUST00000026740 Gm21887J3QQ04 176 aa8,22□□□□□ -1,09
Col7a1-201ENSMUST00000026740 Gm9112A2AI92 75 aa8,22□□□□□ -1,09
Col7a1-201ENSMUST00000026740 HttP42859 3119 aa8,22□□□□□ -1,09
Col7a1-201ENSMUST00000026740 AspmQ8CJ27 3122 aa8,19□□□□□ -1,1
Col7a1-201ENSMUST00000026740 Gm7138L7N2C3 230 aa8,18□□□□□ -1,1
Col7a1-201ENSMUST00000026740 Gm3238W4VSP7 230 aa8,18□□□□□ -1,1
Col7a1-201ENSMUST00000026740 Cdh23Q99PF4 3354 aa8,17□□□□□ -1,1
Col7a1-201ENSMUST00000026740 LrbaQ9ESE1 2856 aa8,16□□□□□ -1,1
Col7a1-201ENSMUST00000026740 Celsr2Q9R0M0 2920 aa8,16□□□□□ -1,1
Col7a1-201ENSMUST00000026740 Unc80Q8BLN6 3261 aa8,12□□□□□ -1,11
Col7a1-201ENSMUST00000026740 Trank1Q8BV79 2999 aa8,1□□□□□ -1,11
Col7a1-201ENSMUST00000026740 Celsr1O35161 3034 aa8,09□□□□□ -1,11
Col7a1-201ENSMUST00000026740 Krtap14O08640 167 aa8,09□□□□□ -1,11
Retrieved 100 of 22,080 RNA–protein pairs in 11,4 ms