RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 6030445D17RikE9Q8F9 148 aa9.18□□□□□ -0.94
Col7a1-201ENSMUST00000026740 Cep350E9Q309 3095 aa9.17□□□□□ -0.94
Col7a1-201ENSMUST00000026740 NbdyA0A0N4SUI7 68 aa9.17□□□□□ -0.94
Col7a1-201ENSMUST00000026740 Utp20Q5XG71 2788 aaKnown RBP9.17□□□□□ -0.94
Col7a1-201ENSMUST00000026740 Gm4491E0CX42 125 aa9.14□□□□□ -0.95
Col7a1-201ENSMUST00000026740 Plac8Q9JI48 112 aa9.14□□□□□ -0.95
Col7a1-201ENSMUST00000026740 Odf3bQ5M8M2 238 aa9.12□□□□□ -0.95
Col7a1-201ENSMUST00000026740 Nbeal2Q6ZQA0 2742 aa9.1□□□□□ -0.95
Col7a1-201ENSMUST00000026740 ApcQ61315 2845 aa9.1□□□□□ -0.95
Col7a1-201ENSMUST00000026740 Fam229aB2KGE5 128 aa9.1□□□□□ -0.95
Col7a1-201ENSMUST00000026740 Anapc11Q9CPX9 84 aa9.09□□□□□ -0.95
Col7a1-201ENSMUST00000026740 Gm3285A0A1W2P7U0 201 aa9.05□□□□□ -0.96
Col7a1-201ENSMUST00000026740 Tex15F8VPN2 2785 aa9.03□□□□□ -0.96
Col7a1-201ENSMUST00000026740 Smim29Q8R043 75 aa9.01□□□□□ -0.97
Col7a1-201ENSMUST00000026740 Sec61bQ9CQS8 96 aaKnown RBP9□□□□□ -0.97
Col7a1-201ENSMUST00000026740 Fam229bQ8CF36 80 aa9□□□□□ -0.97
Col7a1-201ENSMUST00000026740 Romo1P60603 79 aa9□□□□□ -0.97
Col7a1-201ENSMUST00000026740 Ubr5Q80TP3 2792 aa8.98□□□□□ -0.97
Col7a1-201ENSMUST00000026740 Prune2Q52KR3 3084 aa8.97□□□□□ -0.97
Col7a1-201ENSMUST00000026740 Rpl37Q9D823 97 aa8.95□□□□□ -0.98
Col7a1-201ENSMUST00000026740 Gm10320E9PW43 113 aa8.94□□□□□ -0.98
Col7a1-201ENSMUST00000026740 Gm37013Q8K491 104 aa8.94□□□□□ -0.98
Col7a1-201ENSMUST00000026740 Ash1lQ99MY8 2958 aa8.93□□□□□ -0.98
Col7a1-201ENSMUST00000026740 UtrnE9Q6R7 3430 aa8.92□□□□□ -0.98
Col7a1-201ENSMUST00000026740 Lama2Q60675 3118 aaKnown RBP8.91□□□□□ -0.98
Col7a1-201ENSMUST00000026740 Gm10139O88245 57 aa8.89□□□□□ -0.99
Col7a1-201ENSMUST00000026740 Gm3646F6S692 53 aa8.86□□□□□ -0.99
Col7a1-201ENSMUST00000026740 BC029722A0A0N4SW31 51 aa8.85□□□□□ -0.99
Col7a1-201ENSMUST00000026740 Gm16253D3Z167 63 aa8.84□□□□□ -0.99
Col7a1-201ENSMUST00000026740 Krtap15-1Q9QZU5 150 aa8.83□□□□□ -1
Col7a1-201ENSMUST00000026740 Chd7A2AJK6 2986 aaKnown RBP8.83□□□□□ -1
Col7a1-201ENSMUST00000026740 Muc2Q80Z19 2680 aa8.82□□□□□ -1
Col7a1-201ENSMUST00000026740 Gm11565A2A4M7 156 aa8.82□□□□□ -1
Col7a1-201ENSMUST00000026740 Gm10382Q3V0T5 144 aa8.79□□□□□ -1
Col7a1-201ENSMUST00000026740 Fbn2Q61555 2907 aa8.78□□□□□ -1
Col7a1-201ENSMUST00000026740 1700042G07RikB1AUF7 90 aa8.77□□□□□ -1
Col7a1-201ENSMUST00000026740 Gm19426M0QWC7 77 aa8.77□□□□□ -1.01
Col7a1-201ENSMUST00000026740 Gm5767A0A0J9YTU8 78 aa8.76□□□□□ -1.01
Col7a1-201ENSMUST00000026740 Cox6b2Q80ZN9 88 aa8.76□□□□□ -1.01
Col7a1-201ENSMUST00000026740 Sprr1aQ62266 144 aa8.75□□□□□ -1.01
Col7a1-201ENSMUST00000026740 Gm3250E9Q1M3 230 aa8.75□□□□□ -1.01
Col7a1-201ENSMUST00000026740 MgaA2AWL7 3003 aaKnown RBP8.74□□□□□ -1.01
Col7a1-201ENSMUST00000026740 Dmxl1Q6PNC0 3013 aa8.73□□□□□ -1.01
Col7a1-201ENSMUST00000026740 Ranbp2Q9ERU9 3053 aaKnown RBP8.73□□□□□ -1.01
Col7a1-201ENSMUST00000026740 Srrm2Q8BTI8 2703 aaKnown RBP8.72□□□□□ -1.01
Col7a1-201ENSMUST00000026740 TrioQ0KL02 3102 aa8.72□□□□□ -1.01
Col7a1-201ENSMUST00000026740 Zzef1Q5SSH7 2924 aa8.71□□□□□ -1.02
Col7a1-201ENSMUST00000026740 Hivep1Q03172 2688 aa8.69□□□□□ -1.02
Col7a1-201ENSMUST00000026740 Bod1lE9Q6J5 3032 aa8.69□□□□□ -1.02
Col7a1-201ENSMUST00000026740 KalrnA2CG49 2964 aa8.67□□□□□ -1.02
Col7a1-201ENSMUST00000026740 Krtap29-1A2A5X4 342 aa8.65□□□□□ -1.02
Col7a1-201ENSMUST00000026740 FrylF8VQ05 3007 aa8.65□□□□□ -1.02
Col7a1-201ENSMUST00000026740 Vps13aQ5H8C4 3166 aa8.64□□□□□ -1.03
Col7a1-201ENSMUST00000026740 Rps29P62274 56 aa8.63□□□□□ -1.03
Col7a1-201ENSMUST00000026740 Gm7173A0A0G2JEB6 3132 aa8.62□□□□□ -1.03
Col7a1-201ENSMUST00000026740 DspE9Q557 2883 aaKnown RBP8.62□□□□□ -1.03
Col7a1-201ENSMUST00000026740 FcgbpE9Q0B5 2583 aa8.61□□□□□ -1.03
Col7a1-201ENSMUST00000026740 Igfn1Q3KNY0 2849 aa8.59□□□□□ -1.03
Col7a1-201ENSMUST00000026740 Usp34Q6ZQ93 3582 aa8.57□□□□□ -1.04
Col7a1-201ENSMUST00000026740 Mki67E9PVX6 3177 aaKnown RBP8.57□□□□□ -1.04
Col7a1-201ENSMUST00000026740 FlncQ8VHX6 2726 aaKnown RBP8.57□□□□□ -1.04
Col7a1-201ENSMUST00000026740 Myo15bI7HPW8 3033 aa8.56□□□□□ -1.04
Col7a1-201ENSMUST00000026740 4933415A04RikQ9D443 101 aa8.56□□□□□ -1.04
Col7a1-201ENSMUST00000026740 A730071L15RikQ8C4X0 137 aa8.56□□□□□ -1.04
Col7a1-201ENSMUST00000026740 Ndufaf8A2AMZ4 74 aa8.55□□□□□ -1.04
Col7a1-201ENSMUST00000026740 Cystm1Q8K353 104 aa8.54□□□□□ -1.04
Col7a1-201ENSMUST00000026740 Lama3Q61789 3330 aa8.53□□□□□ -1.04
Col7a1-201ENSMUST00000026740 TgO08710 2766 aa8.51□□□□□ -1.05
Col7a1-201ENSMUST00000026740 BptfA2A654 3036 aaKnown RBP8.5□□□□□ -1.05
Col7a1-201ENSMUST00000026740 Cfap54Q8C6S9 3106 aa8.48□□□□□ -1.05
Col7a1-201ENSMUST00000026740 Tenm1Q9WTS4 2731 aa8.47□□□□□ -1.05
Col7a1-201ENSMUST00000026740 2310050C09RikG5E8Z3 280 aa8.47□□□□□ -1.05
Col7a1-201ENSMUST00000026740 Pdzd2E9Q1M1 2796 aa8.47□□□□□ -1.05
Col7a1-201ENSMUST00000026740 Gm40193A0A1B0GT39 78 aa8.46□□□□□ -1.05
Col7a1-201ENSMUST00000026740 FryE9Q8I9 3020 aa8.46□□□□□ -1.06
Col7a1-201ENSMUST00000026740 Rev3lQ61493 3122 aa8.45□□□□□ -1.06
Col7a1-201ENSMUST00000026740 AtmQ62388 3066 aa8.43□□□□□ -1.06
Col7a1-201ENSMUST00000026740 Nf1Q04690 2841 aa8.41□□□□□ -1.06
Col7a1-201ENSMUST00000026740 SmcpP15265 143 aa8.37□□□□□ -1.07
Col7a1-201ENSMUST00000026740 Chd9Q8BYH8 2885 aa8.36□□□□□ -1.07
Col7a1-201ENSMUST00000026740 Gm2310J3QNJ2 377 aa8.35□□□□□ -1.07
Col7a1-201ENSMUST00000026740 Tnp1P10856 55 aa8.33□□□□□ -1.08
Col7a1-201ENSMUST00000026740 Col12a1Q60847 3120 aa8.31□□□□□ -1.08
Col7a1-201ENSMUST00000026740 Gm17349F7BGH6 99 aa8.3□□□□□ -1.08
Col7a1-201ENSMUST00000026740 Wdfy4E9Q2M9 3149 aa8.29□□□□□ -1.08
Col7a1-201ENSMUST00000026740 NbeaQ9EPN1 2936 aa8.29□□□□□ -1.08
Col7a1-201ENSMUST00000026740 Gm3233E9Q2H5 230 aa8.28□□□□□ -1.08
Col7a1-201ENSMUST00000026740 Gm21887J3QQ04 176 aa8.22□□□□□ -1.09
Col7a1-201ENSMUST00000026740 Gm9112A2AI92 75 aa8.22□□□□□ -1.09
Col7a1-201ENSMUST00000026740 HttP42859 3119 aa8.22□□□□□ -1.09
Col7a1-201ENSMUST00000026740 AspmQ8CJ27 3122 aa8.19□□□□□ -1.1
Col7a1-201ENSMUST00000026740 Gm7138L7N2C3 230 aa8.18□□□□□ -1.1
Col7a1-201ENSMUST00000026740 Gm3238W4VSP7 230 aa8.18□□□□□ -1.1
Col7a1-201ENSMUST00000026740 Cdh23Q99PF4 3354 aa8.17□□□□□ -1.1
Col7a1-201ENSMUST00000026740 LrbaQ9ESE1 2856 aa8.16□□□□□ -1.1
Col7a1-201ENSMUST00000026740 Celsr2Q9R0M0 2920 aa8.16□□□□□ -1.1
Col7a1-201ENSMUST00000026740 Unc80Q8BLN6 3261 aa8.12□□□□□ -1.11
Col7a1-201ENSMUST00000026740 Trank1Q8BV79 2999 aa8.1□□□□□ -1.11
Col7a1-201ENSMUST00000026740 Celsr1O35161 3034 aa8.09□□□□□ -1.11
Col7a1-201ENSMUST00000026740 Krtap14O08640 167 aa8.09□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms