RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Gm20726G3UX18 150 aa8.91□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Ccdc179J3QM76 67 aa8.91□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Defb39Q70KL3 74 aa8.91□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Ube2v1Q9CZY3 147 aa8.91□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Fat2Q5F226 4351 aa8.89□□□□□ -0.99
Ercc1-201ENSMUST00000003645 1700020N15RikL7MTX3 112 aa8.89□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Acyp1P56376 99 aa8.89□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Mtatp8P03930 67 aa8.88□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Vps13bQ80TY5 3993 aa8.88□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Igkv2-109A0A075B5K6 120 aa8.87□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Odf3bQ5M8M2 238 aa8.87□□□□□ -0.99
Ercc1-201ENSMUST00000003645 RetnlbQ99P86 105 aa8.86□□□□□ -0.99
Ercc1-201ENSMUST00000003645 A0A286YE02 88 aa8.86□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Vpreb3D3Z6J4 130 aa8.86□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Igkv8-26A0A075B5N5 123 aa8.85□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Defa28D3Z1V9 94 aa8.85□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Krtap19-5O08632 62 aa8.85□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Igf1P05017 153 aa8.84□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Vpreb1P13372 142 aa8.84□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Gm10767Q3TQP0 103 aa8.84□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Wfdc13Q5DQQ6 81 aa8.84□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Mrpl55Q9CZ83 127 aa8.84□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Bean1Q9EQG5 255 aa8.84□□□□□ -0.99
Ercc1-201ENSMUST00000003645 Igkv3-5A0A140T8M6 119 aa8.83□□□□□ -1
Ercc1-201ENSMUST00000003645 9530003J23RikQ8BM26 151 aa8.83□□□□□ -1
Ercc1-201ENSMUST00000003645 Gm26920S4R2A5 56 aa8.83□□□□□ -1
Ercc1-201ENSMUST00000003645 Inafm2A0A1L1STD6 152 aa8.82□□□□□ -1
Ercc1-201ENSMUST00000003645 Znf706Q9D115 76 aaKnown RBP8.82□□□□□ -1
Ercc1-201ENSMUST00000003645 A830005F24RikQ8BRT5 167 aa8.79□□□□□ -1
Ercc1-201ENSMUST00000003645 Ifitm6A0A1B0GS75 124 aa8.78□□□□□ -1
Ercc1-201ENSMUST00000003645 Anapc11Q9CPX9 84 aa8.78□□□□□ -1
Ercc1-201ENSMUST00000003645 Gm10401E9Q3K6 71 aa8.77□□□□□ -1.01
Ercc1-201ENSMUST00000003645 Gm37389A0A0A6YW05 95 aa8.76□□□□□ -1.01
Ercc1-201ENSMUST00000003645 Lamtor3O88653 124 aa8.75□□□□□ -1.01
Ercc1-201ENSMUST00000003645 Ighv10-3A0A075B5T6 119 aa8.74□□□□□ -1.01
Ercc1-201ENSMUST00000003645 Cypt14J3QPF7 87 aa8.74□□□□□ -1.01
Ercc1-201ENSMUST00000003645 P06320 134 aa8.74□□□□□ -1.01
Ercc1-201ENSMUST00000003645 Gm7102J3QQ10 178 aa8.73□□□□□ -1.01
Ercc1-201ENSMUST00000003645 HrnrQ8VHD8 2496 aa8.73□□□□□ -1.01
Ercc1-201ENSMUST00000003645 Cox6a2P43023 97 aa8.73□□□□□ -1.01
Ercc1-201ENSMUST00000003645 Vps25Q9CQ80 176 aa8.73□□□□□ -1.01
Ercc1-201ENSMUST00000003645 Fat3Q8BNA6 4555 aa8.72□□□□□ -1.01
Ercc1-201ENSMUST00000003645 Birc6O88738 4882 aa8.72□□□□□ -1.01
Ercc1-201ENSMUST00000003645 Sfta2E9PXB6 77 aa8.71□□□□□ -1.02
Ercc1-201ENSMUST00000003645 Igkv8-27A0A0G2JF28 120 aa8.7□□□□□ -1.02
Ercc1-201ENSMUST00000003645 Igkv8-30A0A140T8M3 121 aa8.7□□□□□ -1.02
Ercc1-201ENSMUST00000003645 Herc2Q4U2R1 4836 aa8.69□□□□□ -1.02
Ercc1-201ENSMUST00000003645 Gm10308Q9CVR5 141 aa8.69□□□□□ -1.02
Ercc1-201ENSMUST00000003645 Defa25Q5G864 92 aa8.68□□□□□ -1.02
Ercc1-201ENSMUST00000003645 Q8BT88 171 aa8.68□□□□□ -1.02
Ercc1-201ENSMUST00000003645 A730071L15RikQ8C4X0 137 aa8.68□□□□□ -1.02
Ercc1-201ENSMUST00000003645 Abca13Q5SSE9 5034 aa8.67□□□□□ -1.02
Ercc1-201ENSMUST00000003645 Chchd10Q7TNL9 138 aa8.67□□□□□ -1.02
Ercc1-201ENSMUST00000003645 1700018G05RikA0A1B0GSI2 66 aa8.65□□□□□ -1.02
Ercc1-201ENSMUST00000003645 Dnhd1D3Z2X2 4750 aa8.64□□□□□ -1.03
Ercc1-201ENSMUST00000003645 Lrp1Q91ZX7 4545 aaKnown RBP8.64□□□□□ -1.03
Ercc1-201ENSMUST00000003645 Igkv8-28A0A0G2JE47 121 aa8.64□□□□□ -1.03
Ercc1-201ENSMUST00000003645 Defb12Q8K4N3 78 aa8.64□□□□□ -1.03
Ercc1-201ENSMUST00000003645 Kiaa1109A2AAE1 5005 aa8.64□□□□□ -1.03
Ercc1-201ENSMUST00000003645 Gm12353A2AGJ4 60 aa8.63□□□□□ -1.03
Ercc1-201ENSMUST00000003645 Rbm3O89086 153 aaKnown RBP8.63□□□□□ -1.03
Ercc1-201ENSMUST00000003645 Sprr2jO70561 109 aa8.61□□□□□ -1.03
Ercc1-201ENSMUST00000003645 Xcl1P47993 114 aa8.61□□□□□ -1.03
Ercc1-201ENSMUST00000003645 Pde6gP09174 87 aa8.61□□□□□ -1.03
Ercc1-201ENSMUST00000003645 Igkv3-10A0A0G2JGN0 119 aa8.59□□□□□ -1.03
Ercc1-201ENSMUST00000003645 Gm28230A0A0A0MQ91 144 aa8.58□□□□□ -1.04
Ercc1-201ENSMUST00000003645 D6Ertd527eA0A0N4SWI3 464 aa8.58□□□□□ -1.04
Ercc1-201ENSMUST00000003645 A530084C06RikQ3UTW2 186 aa8.55□□□□□ -1.04
Ercc1-201ENSMUST00000003645 Pxt1Q8K459 51 aa8.53□□□□□ -1.04
Ercc1-201ENSMUST00000003645 Gm16253D3Z167 63 aa8.52□□□□□ -1.05
Ercc1-201ENSMUST00000003645 Cby1Q9D1C2 127 aa8.52□□□□□ -1.05
Ercc1-201ENSMUST00000003645 Trav14d-3-dv8A0A075B619 120 aa8.51□□□□□ -1.05
Ercc1-201ENSMUST00000003645 Igkv3-4A0A140T8Q4 119 aa8.51□□□□□ -1.05
Ercc1-201ENSMUST00000003645 Bud31Q6PGH1 103 aa8.51□□□□□ -1.05
Ercc1-201ENSMUST00000003645 Spaca4Q80ZQ0 127 aa8.51□□□□□ -1.05
Ercc1-201ENSMUST00000003645 Ormdl1Q921I0 153 aa8.51□□□□□ -1.05
Ercc1-201ENSMUST00000003645 Gm37013Q8K491 104 aa8.49□□□□□ -1.05
Ercc1-201ENSMUST00000003645 Gm44790A0A0N4SV91 103 aa8.48□□□□□ -1.05
Ercc1-201ENSMUST00000003645 Tmem213Q08EA8 116 aa8.48□□□□□ -1.05
Ercc1-201ENSMUST00000003645 4930535I16RikQ9CUI2 172 aa8.48□□□□□ -1.05
Ercc1-201ENSMUST00000003645 Gm17689B3GLJ4 109 aa8.48□□□□□ -1.05
Ercc1-201ENSMUST00000003645 Gm21886J3QJU9 214 aa8.48□□□□□ -1.05
Ercc1-201ENSMUST00000003645 HydinQ80W93 5154 aa8.45□□□□□ -1.06
Ercc1-201ENSMUST00000003645 Dph3Q8K0W9 82 aa8.45□□□□□ -1.06
Ercc1-201ENSMUST00000003645 Mrpl34Q99N91 92 aa8.45□□□□□ -1.06
Ercc1-201ENSMUST00000003645 UqcrqQ9CQ69 82 aa8.45□□□□□ -1.06
Ercc1-201ENSMUST00000003645 Gtf2h5Q8K2X8 71 aa8.44□□□□□ -1.06
Ercc1-201ENSMUST00000003645 Lce1mQ9CR91 182 aa8.44□□□□□ -1.06
Ercc1-201ENSMUST00000003645 Igkv8-21A0A140T8P7 120 aa8.43□□□□□ -1.06
Ercc1-201ENSMUST00000003645 Gm9736A0A1W2P7N1 277 aa8.43□□□□□ -1.06
Ercc1-201ENSMUST00000003645 Rps29P62274 56 aa8.43□□□□□ -1.06
Ercc1-201ENSMUST00000003645 C130032M10RikQ8C888 123 aa8.43□□□□□ -1.06
Ercc1-201ENSMUST00000003645 Gm2310J3QNJ2 377 aa8.42□□□□□ -1.06
Ercc1-201ENSMUST00000003645 Gm20604F8WIA3 75 aa8.41□□□□□ -1.06
Ercc1-201ENSMUST00000003645 Lyrm7Q9DA03 104 aa8.36□□□□□ -1.07
Ercc1-201ENSMUST00000003645 Cdip1Q9DB75 208 aa8.36□□□□□ -1.07
Ercc1-201ENSMUST00000003645 Ubl5Q9EPV8 73 aa8.36□□□□□ -1.07
Ercc1-201ENSMUST00000003645 PcloQ9QYX7 5068 aa8.36□□□□□ -1.07
Ercc1-201ENSMUST00000003645 Mycbp2Q7TPH6 4711 aa8.35□□□□□ -1.07
Ercc1-201ENSMUST00000003645 Fam240bJ3QMB3 78 aa8.34□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms