RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 HrnrQ8VHD8 2496 aa5.57□□□□□ -1.52
Ccdc47-201ENSMUST00000002043 FlnaQ8BTM8 2647 aaKnown RBP5.56□□□□□ -1.52
Ccdc47-201ENSMUST00000002043 Jbts17Q8CE72 3214 aa5.56□□□□□ -1.52
Ccdc47-201ENSMUST00000002043 Wdfy3Q6VNB8 3508 aa5.55□□□□□ -1.52
Ccdc47-201ENSMUST00000002043 PcntP48725 2898 aa5.55□□□□□ -1.52
Ccdc47-201ENSMUST00000002043 Zfp292Q9Z2U2 2698 aa5.54□□□□□ -1.52
Ccdc47-201ENSMUST00000002043 A730071L15RikQ8C4X0 137 aa5.54□□□□□ -1.52
Ccdc47-201ENSMUST00000002043 Gcn1E9PVA8 2671 aaKnown RBP5.54□□□□□ -1.52
Ccdc47-201ENSMUST00000002043 BC029722A0A0N4SW31 51 aa5.54□□□□□ -1.52
Ccdc47-201ENSMUST00000002043 HttP42859 3119 aa5.53□□□□□ -1.52
Ccdc47-201ENSMUST00000002043 Cox6b2Q80ZN9 88 aa5.52□□□□□ -1.53
Ccdc47-201ENSMUST00000002043 Akap13E9Q394 2776 aa5.51□□□□□ -1.53
Ccdc47-201ENSMUST00000002043 1700042G07RikB1AUF7 90 aa5.51□□□□□ -1.53
Ccdc47-201ENSMUST00000002043 DmdP11531 3678 aa5.5□□□□□ -1.53
Ccdc47-201ENSMUST00000002043 Gm5767A0A0J9YTU8 78 aa5.5□□□□□ -1.53
Ccdc47-201ENSMUST00000002043 Cystm1Q8K353 104 aa5.5□□□□□ -1.53
Ccdc47-201ENSMUST00000002043 Cep350E9Q309 3095 aa5.49□□□□□ -1.53
Ccdc47-201ENSMUST00000002043 Szt2A2A9C3 3431 aa5.49□□□□□ -1.53
Ccdc47-201ENSMUST00000002043 Mast4Q811L6 2618 aa5.48□□□□□ -1.53
Ccdc47-201ENSMUST00000002043 Krtap15-1Q9QZU5 150 aa5.48□□□□□ -1.53
Ccdc47-201ENSMUST00000002043 Rps29P62274 56 aa5.47□□□□□ -1.53
Ccdc47-201ENSMUST00000002043 4933415A04RikQ9D443 101 aa5.47□□□□□ -1.53
Ccdc47-201ENSMUST00000002043 Gm7173A0A0G2JEB6 3132 aa5.46□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 NipblQ6KCD5 2798 aaKnown RBP5.46□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 Krtap29-1A2A5X4 342 aa5.45□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 Cdh23Q99PF4 3354 aa5.45□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 Gm10382Q3V0T5 144 aa5.44□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 Dnah12Q3V0Q1 3086 aa5.44□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 Chd6A3KFM7 2711 aa5.44□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 Stab1Q8R4Y4 2571 aa5.43□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 Gm19426M0QWC7 77 aa5.42□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 Unc80Q8BLN6 3261 aa5.41□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 Col6a3E9PWQ3 3284 aa5.41□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 Gm9195A0A140LHT4 2805 aa5.4□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 Hectd1Q69ZR2 2618 aaKnown RBP5.4□□□□□ -1.54
Ccdc47-201ENSMUST00000002043 Dchs2A0A0A6YW72 3346 aa5.4□□□□□ -1.55
Ccdc47-201ENSMUST00000002043 Gm3233E9Q2H5 230 aa5.39□□□□□ -1.55
Ccdc47-201ENSMUST00000002043 Igsf10Q3V1M1 2594 aa5.36□□□□□ -1.55
Ccdc47-201ENSMUST00000002043 Vps13aQ5H8C4 3166 aa5.34□□□□□ -1.55
Ccdc47-201ENSMUST00000002043 Brca2P97929 3329 aa5.33□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 Gm2310J3QNJ2 377 aa5.33□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 Gm884A2A9H6 3643 aa5.33□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 Gm17349F7BGH6 99 aa5.32□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 Lelp1Q9DAE3 120 aa5.32□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 A0A1Y7VLE6 161 aa5.32□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 Mki67E9PVX6 3177 aaKnown RBP5.31□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 Zfhx3Q61329 3726 aa5.31□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 Tep1P97499 2629 aa5.31□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 Col12a1Q60847 3120 aa5.31□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 Gm7138L7N2C3 230 aa5.3□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 Gm3238W4VSP7 230 aa5.3□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 9530053A07RikE9PVG8 2581 aa5.3□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 Stab2Q8R4U0 2559 aa5.3□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 2310050C09RikG5E8Z3 280 aa5.28□□□□□ -1.56
Ccdc47-201ENSMUST00000002043 Gm40193A0A1B0GT39 78 aa5.26□□□□□ -1.57
Ccdc47-201ENSMUST00000002043 CenpfE9Q3P4 2997 aaKnown RBP5.25□□□□□ -1.57
Ccdc47-201ENSMUST00000002043 Rev3lQ61493 3122 aa5.25□□□□□ -1.57
Ccdc47-201ENSMUST00000002043 Muc5acE9QAQ8 3455 aa5.24□□□□□ -1.57
Ccdc47-201ENSMUST00000002043 Myo15bI7HPW8 3033 aa5.24□□□□□ -1.57
Ccdc47-201ENSMUST00000002043 Lrrc37aB1AWG4 3215 aa5.24□□□□□ -1.57
Ccdc47-201ENSMUST00000002043 Tnp2P11378 117 aa5.21□□□□□ -1.57
Ccdc47-201ENSMUST00000002043 Itpr3P70227 2670 aa5.2□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 Map1aQ9QYR6 2776 aa5.2□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 Frem2Q6NVD0 3160 aa5.2□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 Akap9Q70FJ1 3797 aa5.2□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 SpenQ62504 3644 aaKnown RBP5.19□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 Gm7137J3QMW1 236 aa5.18□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 Prrc2cQ3TLH4 2846 aaKnown RBP5.18□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 Krtap14O08640 167 aa5.17□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 Myo15aQ9QZZ4 3511 aa5.17□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 Pkd1l1Q8R526 2615 aa5.16□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 AspmQ8CJ27 3122 aa5.16□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 D6Ertd527eA0A0N4SWI3 464 aa5.15□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 Gm9508A0A1W2P7W0 230 aa5.15□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 Ndufaf8A2AMZ4 74 aa5.15□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 AtmQ62388 3066 aa5.15□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 Itpr1P11881 2749 aa5.15□□□□□ -1.58
Ccdc47-201ENSMUST00000002043 2310061N02RikQ9D6S9 174 aa5.15□□□□□ -1.59
Ccdc47-201ENSMUST00000002043 Krtap13O88375 197 aa5.14□□□□□ -1.59
Ccdc47-201ENSMUST00000002043 SpegQ62407 3262 aa5.12□□□□□ -1.59
Ccdc47-201ENSMUST00000002043 Tnp1P10856 55 aa5.12□□□□□ -1.59
Ccdc47-201ENSMUST00000002043 Ubr5Q80TP3 2792 aa5.12□□□□□ -1.59
Ccdc47-201ENSMUST00000002043 FcgbpE9Q0B5 2583 aa5.11□□□□□ -1.59
Ccdc47-201ENSMUST00000002043 VcanQ62059 3357 aa5.11□□□□□ -1.59
Ccdc47-201ENSMUST00000002043 Prune2Q52KR3 3084 aa5.1□□□□□ -1.59
Ccdc47-201ENSMUST00000002043 Gm21887J3QQ04 176 aa5.1□□□□□ -1.59
Ccdc47-201ENSMUST00000002043 Col6a5A6H584 2640 aa5.1□□□□□ -1.59
Ccdc47-201ENSMUST00000002043 Chd7A2AJK6 2986 aaKnown RBP5.09□□□□□ -1.59
Ccdc47-201ENSMUST00000002043 Csmd2V9GX34 3611 aa5.08□□□□□ -1.6
Ccdc47-201ENSMUST00000002043 Cfap54Q8C6S9 3106 aa5.07□□□□□ -1.6
Ccdc47-201ENSMUST00000002043 FrylF8VQ05 3007 aa5.06□□□□□ -1.6
Ccdc47-201ENSMUST00000002043 Vps13cQ8BX70 3748 aa5.05□□□□□ -1.6
Ccdc47-201ENSMUST00000002043 Gm36176A0A1W2P8D5 158 aa5.05□□□□□ -1.6
Ccdc47-201ENSMUST00000002043 MgaA2AWL7 3003 aaKnown RBP5.05□□□□□ -1.6
Ccdc47-201ENSMUST00000002043 Gm9112A2AI92 75 aa5.02□□□□□ -1.61
Ccdc47-201ENSMUST00000002043 Tnrc18Q80WC3 2878 aa5□□□□□ -1.61
Ccdc47-201ENSMUST00000002043 Nbeal2Q6ZQA0 2742 aa4.99□□□□□ -1.61
Ccdc47-201ENSMUST00000002043 BptfA2A654 3036 aaKnown RBP4.98□□□□□ -1.61
Ccdc47-201ENSMUST00000002043 Dmxl1Q6PNC0 3013 aa4.98□□□□□ -1.61
Ccdc47-201ENSMUST00000002043 Tex15F8VPN2 2785 aa4.95□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms