RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Ndufc1Q9CQY9 76 aa9.07□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 Ighv10-1A0A0B4J1J6 119 aa9.06□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 Gm5153P01627 120 aa9.06□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 4930556J24RikQ9D4U7 146 aa9.06□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 A730009L09RikA0A1B0GS82 72 aa9.06□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 B9d2Q3UK10 175 aa9.05□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 Defb40Q70KL2 73 aa9.05□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 Gm43218A0A0G2JGT0 114 aa9.05□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 Obox2E9PXV9 151 aa9.05□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 Gm17521F6QAC8 156 aa9.05□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 9530003J23RikQ8BM26 151 aa9.04□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 Mrpl52Q9D0Y8 121 aa9.04□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 Cox7bP56393 80 aa9.04□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 4930518I15RikQ3V2W7 57 aa9.03□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 Gm10401E9Q3K6 71 aa9.03□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 Trav14-1A0A0G2JF94 121 aa9.03□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 Vpreb1P13372 142 aa9.03□□□□□ -0.96
Pdgfra-205ENSMUST00000201711 Cd164Q9R0L9 197 aa9.02□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Ntn5Q3UQ22 452 aa9.01□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Rps28P62858 69 aaKnown RBP9□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Snhg11Q4G0K9 87 aa9□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Krtap11-1E9Q2E9 183 aa9□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Klk9Q32M27 251 aa9□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 A830005F24RikQ8BRT5 167 aa9□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Prr15lQ8JZM2 100 aa9□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Ube2aQ9Z255 152 aa9□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 7530416G11RikJ3QJX6 159 aa9□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Nupr2Q497P3 102 aa8.99□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Ighv10-3A0A075B5T6 119 aa8.98□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Defb50Q6TU36 73 aa8.98□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 SycnQ8VCK7 134 aa8.97□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 ApcQ61315 2845 aa8.97□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Gm17509Q9CZ61 145 aa8.97□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Srrm2Q8BTI8 2703 aaKnown RBP8.97□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Spink8Q09TK9 105 aa8.96□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Ly6g6cQ9Z1Q4 126 aa8.96□□□□□ -0.97
Pdgfra-205ENSMUST00000201711 Ifitm6A0A1B0GS75 124 aa8.96□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 Spata3Q9D9T6 193 aa8.96□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 Vpreb2P13373 142 aa8.95□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 Tcl1b5P56845 121 aa8.95□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 Tenm4Q3UHK6 2771 aa8.95□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 Igkv3-10A0A0G2JGN0 119 aa8.94□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 E130208F15RikQ3UPV3 143 aa8.93□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 P06320 134 aa8.93□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 Igkv3-5A0A140T8M6 119 aa8.93□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 Gm16181B0V2H2 73 aa8.93□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 Msrb1Q9JLC3 116 aa8.93□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 Krtap16-1A2A5X5 502 aa8.92□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 Gm11011D3Z3L9 86 aa8.92□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 Q9DAA7 145 aa8.92□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 P01819 144 aa8.91□□□□□ -0.98
Pdgfra-205ENSMUST00000201711 Serp1Q9Z1W5 66 aa8.89□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 C530025M09RikF6RGA8 229 aa8.89□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 1810062G17RikG3X8Y2 129 aa8.89□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Gm36176A0A1W2P8D5 158 aa8.88□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 SnurfQ9WU12 71 aa8.88□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Gm10337F7DEP7 55 aa8.88□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Defb11Q8R2I7 77 aa8.88□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 BaalcQ8VHV1 145 aa8.87□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Ighv2-5A0A0A6YY69 116 aa8.87□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Gm10308Q9CVR5 141 aa8.87□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Wfdc10Q3V2J9 124 aa8.86□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 4930519P11RikQ9CUJ8 166 aa8.86□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Igkv8-27A0A0G2JF28 120 aa8.86□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Igkv8-30A0A140T8M3 121 aa8.86□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Pou2af1Q64693 256 aa8.85□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Gm9903Q8C9Y8 129 aa8.85□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 2310034G01RikA0A286YDL3 209 aa8.85□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Znf414Q9DCK4 299 aa8.85□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Csmd2V9GX34 3611 aa8.84□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Igkv1-110A0A0B4J1I0 119 aa8.84□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Wfdc17Q5SSJ1 76 aa8.84□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Igkv8-21A0A140T8P7 120 aa8.84□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 Fam168bQ80XQ8 194 aa8.84□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 AplnQ9R0R4 77 aa8.84□□□□□ -0.99
Pdgfra-205ENSMUST00000201711 H2al1aQ5M8Q2 105 aa8.82□□□□□ -1
Pdgfra-205ENSMUST00000201711 UqcrqQ9CQ69 82 aa8.81□□□□□ -1
Pdgfra-205ENSMUST00000201711 Psors1c2Q80ZC9 134 aa8.81□□□□□ -1
Pdgfra-205ENSMUST00000201711 1600014C23RikQ9DAX4 101 aa8.81□□□□□ -1
Pdgfra-205ENSMUST00000201711 Gm12353A2AGJ4 60 aa8.8□□□□□ -1
Pdgfra-205ENSMUST00000201711 SmcpP15265 143 aa8.8□□□□□ -1
Pdgfra-205ENSMUST00000201711 Fam19a3Q7TPG6 132 aa8.8□□□□□ -1
Pdgfra-205ENSMUST00000201711 Sprr1bQ62267 153 aa8.8□□□□□ -1
Pdgfra-205ENSMUST00000201711 AY074887Q8R5F9 132 aa8.8□□□□□ -1
Pdgfra-205ENSMUST00000201711 Sprr4Q8CGN8 76 aa8.79□□□□□ -1
Pdgfra-205ENSMUST00000201711 Igkv3-12A0A140T8P0 119 aa8.78□□□□□ -1
Pdgfra-205ENSMUST00000201711 Ighv2-2A0A075B5P8 116 aa8.77□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Sprr2jO70561 109 aa8.77□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 P01821 116 aa8.77□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Defb38Q7TNV7 63 aa8.77□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Gm10770F7D043 238 aa8.76□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Vpreb3D3Z6J4 130 aa8.75□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Gm17689B3GLJ4 109 aa8.75□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 1700018G05RikA0A1B0GSI2 66 aa8.75□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Elof1P60003 83 aa8.75□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Smim29Q8R043 75 aa8.75□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Gm10837Q3UTT8 145 aa8.74□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Adm2Q7TNK8 150 aa8.73□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Gm10570F6VB42 170 aa8.73□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Igkv3-4A0A140T8Q4 119 aa8.72□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 92.3 ms