RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Wfdc13Q5DQQ6 81 aa9.41□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Gm9195A0A140LHT4 2805 aa9.4□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Gm10267M0QWD8 85 aa9.4□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 C130032M10RikQ8C888 123 aa9.39□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 Usp9yF8VPU6 2556 aa9.39□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 Cdc42se1Q8BHL7 80 aa9.38□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 AW011738F6S7Q2 159 aa9.38□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 4930519P11RikQ9CUJ8 166 aa9.38□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 Gm28374F6SG70 93 aa9.38□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 Gcn1E9PVA8 2671 aaKnown RBP9.37□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 Usp24B1AY13 2617 aaKnown RBP9.37□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 Limd2Q8BGB5 128 aa9.36□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 Adm2Q7TNK8 150 aa9.36□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 Gm28230A0A0A0MQ91 144 aa9.36□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 AtrQ9JKK8 2635 aa9.35□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 1600014C23RikQ9DAX4 101 aa9.34□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 Gm10160F6Y577 67 aa9.34□□□□□ -0.91
Pcdha1-202ENSMUST00000193839 Wfdc6bF6ULY1 148 aa9.33□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Dmac1Q9CQ00 111 aa9.33□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Eif4ebp3Q80VV3 101 aa9.32□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Map1aQ9QYR6 2776 aa9.31□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Reg3aO09037 175 aa9.3□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Fbn2Q61555 2907 aa9.29□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Jbts17Q8CE72 3214 aa9.29□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Sprr1bQ62267 153 aa9.29□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 AplnQ9R0R4 77 aa9.29□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Dmxl1Q6PNC0 3013 aa9.29□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 1810062G17RikG3X8Y2 129 aa9.29□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Gm21886J3QJU9 214 aa9.29□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Defb50Q6TU36 73 aa9.29□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Defb37Q7TMD2 62 aa9.28□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Gm3233E9Q2H5 230 aa9.27□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 Gm10643Q3URG9 111 aa9.27□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 AI606181Q8C7B9 129 aa9.27□□□□□ -0.92
Pcdha1-202ENSMUST00000193839 KalrnA2CG49 2964 aa9.27□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 Gm10770F7D043 238 aa9.26□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 Wfdc17Q5SSJ1 76 aa9.26□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 MgaA2AWL7 3003 aaKnown RBP9.25□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 Igkv8-19A0A0G2JFN8 121 aa9.25□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 Prol1E9PYQ4 312 aa9.25□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 Cdh23Q99PF4 3354 aa9.25□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 FasnP19096 2504 aaKnown RBP9.24□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 Gm44790A0A0N4SV91 103 aa9.23□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 Gm17689B3GLJ4 109 aa9.22□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 Defb38Q7TNV7 63 aa9.22□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 Gm10837Q3UTT8 145 aa9.22□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 Znf414Q9DCK4 299 aa9.22□□□□□ -0.93
Pcdha1-202ENSMUST00000193839 1700018G05RikA0A1B0GSI2 66 aa9.21□□□□□ -0.94
Pcdha1-202ENSMUST00000193839 Coa5Q99M07 74 aa9.21□□□□□ -0.94
Pcdha1-202ENSMUST00000193839 Krtap11-1E9Q2E9 183 aa9.2□□□□□ -0.94
Pcdha1-202ENSMUST00000193839 Bean1Q9EQG5 255 aa9.2□□□□□ -0.94
Pcdha1-202ENSMUST00000193839 Phxr4P15974 95 aa9.2□□□□□ -0.94
Pcdha1-202ENSMUST00000193839 Sprr4Q8CGN8 76 aa9.2□□□□□ -0.94
Pcdha1-202ENSMUST00000193839 AY074887Q8R5F9 132 aa9.18□□□□□ -0.94
Pcdha1-202ENSMUST00000193839 Igkv8-28A0A0G2JE47 121 aa9.18□□□□□ -0.94
Pcdha1-202ENSMUST00000193839 Gm7276Q3TYW4 209 aa9.17□□□□□ -0.94
Pcdha1-202ENSMUST00000193839 Prrc2cQ3TLH4 2846 aaKnown RBP9.15□□□□□ -0.94
Pcdha1-202ENSMUST00000193839 Gm10642Q3TWM1 71 aa9.14□□□□□ -0.95
Pcdha1-202ENSMUST00000193839 Szt2A2A9C3 3431 aa9.12□□□□□ -0.95
Pcdha1-202ENSMUST00000193839 Phf5aP83870 110 aaKnown RBP9.12□□□□□ -0.95
Pcdha1-202ENSMUST00000193839 NipblQ6KCD5 2798 aaKnown RBP9.12□□□□□ -0.95
Pcdha1-202ENSMUST00000193839 A930002H24RikQ8C8Y3 163 aa9.11□□□□□ -0.95
Pcdha1-202ENSMUST00000193839 Dmbt1Q60997 2085 aa9.1□□□□□ -0.95
Pcdha1-202ENSMUST00000193839 Gm20661K7N787 53 aa9.1□□□□□ -0.95
Pcdha1-202ENSMUST00000193839 Stab1Q8R4Y4 2571 aa9.1□□□□□ -0.95
Pcdha1-202ENSMUST00000193839 Phxr5P08399 672 aa9.09□□□□□ -0.95
Pcdha1-202ENSMUST00000193839 CnbpP53996 178 aaKnown RBP9.09□□□□□ -0.95
Pcdha1-202ENSMUST00000193839 Gm27235Q3UW50 83 aa9.07□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Itpr3P70227 2670 aa9.06□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Igkv3-7A0A0G2JE31 119 aa9.06□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Bod1lE9Q6J5 3032 aa9.06□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Notch1Q01705 2531 aa9.06□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Gm5617Q91VN2 117 aa9.05□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Q8BT88 171 aa9.04□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Defb39Q70KL3 74 aa9.04□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Uqcr11Q9CPX8 56 aa9.04□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Mast4Q811L6 2618 aa9.04□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 C530025M09RikF6RGA8 229 aa9.04□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Fam168bQ80XQ8 194 aa9.03□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Cfap54Q8C6S9 3106 aa9.03□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Gm11213A0A1B0GR83 88 aa9.02□□□□□ -0.96
Pcdha1-202ENSMUST00000193839 Muc2Q80Z19 2680 aa9.02□□□□□ -0.97
Pcdha1-202ENSMUST00000193839 Nsd1O88491 2588 aaKnown RBP9.02□□□□□ -0.97
Pcdha1-202ENSMUST00000193839 Wfdc3Q14AE4 130 aa9.02□□□□□ -0.97
Pcdha1-202ENSMUST00000193839 Ash1lQ99MY8 2958 aa9.01□□□□□ -0.97
Pcdha1-202ENSMUST00000193839 Akap13E9Q394 2776 aa9□□□□□ -0.97
Pcdha1-202ENSMUST00000193839 A330070K13RikQ8CA53 115 aa9□□□□□ -0.97
Pcdha1-202ENSMUST00000193839 Gm7138L7N2C3 230 aa9□□□□□ -0.97
Pcdha1-202ENSMUST00000193839 OxtP35454 125 aa9□□□□□ -0.97
Pcdha1-202ENSMUST00000193839 Gm3238W4VSP7 230 aa9□□□□□ -0.97
Pcdha1-202ENSMUST00000193839 AspmQ8CJ27 3122 aa8.97□□□□□ -0.97
Pcdha1-202ENSMUST00000193839 4930507D05RikQ8C9C9 103 aa8.96□□□□□ -0.97
Pcdha1-202ENSMUST00000193839 Vps13aQ5H8C4 3166 aa8.96□□□□□ -0.98
Pcdha1-202ENSMUST00000193839 Rpl37aP61514 92 aa8.96□□□□□ -0.98
Pcdha1-202ENSMUST00000193839 Fn1P11276 2477 aaKnown RBP8.94□□□□□ -0.98
Pcdha1-202ENSMUST00000193839 AtmQ62388 3066 aa8.93□□□□□ -0.98
Pcdha1-202ENSMUST00000193839 Fam229bQ8CF36 80 aa8.93□□□□□ -0.98
Pcdha1-202ENSMUST00000193839 Lrrc37aB1AWG4 3215 aa8.93□□□□□ -0.98
Pcdha1-202ENSMUST00000193839 Gpr15lA0A0B4J1N3 78 aa8.92□□□□□ -0.98
Pcdha1-202ENSMUST00000193839 Gm10999F6Q4M4 69 aa8.91□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms