RNA–Protein interactions for RNA: ENSMUST00000162439.7

Shox2-204, Transcript of Short stature homeobox protein 2, mousemouse

TSL 1 (best) BASIC

Gene Shox2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-204ENSMUST00000162439 Gm7102J3QQ10 178 aa12.62□□□□□ -0.39
Shox2-204ENSMUST00000162439 Hist1h2bmP10854 126 aa12.62□□□□□ -0.39
Shox2-204ENSMUST00000162439 Hist1h2bhQ64478 126 aa12.62□□□□□ -0.39
Shox2-204ENSMUST00000162439 Hist2h2bbQ64525 126 aa12.62□□□□□ -0.39
Shox2-204ENSMUST00000162439 Hist1h2bcQ6ZWY9 126 aaKnown RBP12.62□□□□□ -0.39
Shox2-204ENSMUST00000162439 Cd164Q9R0L9 197 aa12.62□□□□□ -0.39
Shox2-204ENSMUST00000162439 Krtap1-3A2A588 173 aa12.6□□□□□ -0.39
Shox2-204ENSMUST00000162439 Ndufc2Q9CQ54 120 aa12.6□□□□□ -0.39
Shox2-204ENSMUST00000162439 Rgs21V9GXQ3 152 aa12.6□□□□□ -0.39
Shox2-204ENSMUST00000162439 Gpx1P11352 201 aa12.59□□□□□ -0.39
Shox2-204ENSMUST00000162439 Znf706Q9D115 76 aaKnown RBP12.59□□□□□ -0.39
Shox2-204ENSMUST00000162439 Igkv3-5A0A140T8M6 119 aa12.58□□□□□ -0.4
Shox2-204ENSMUST00000162439 Gm9047B9EJX3 177 aa12.58□□□□□ -0.4
Shox2-204ENSMUST00000162439 Sostdc1Q9CQN4 206 aa12.58□□□□□ -0.4
Shox2-204ENSMUST00000162439 Q9DAA7 145 aa12.58□□□□□ -0.4
Shox2-204ENSMUST00000162439 Krtap17-1A2A5X6 109 aa12.57□□□□□ -0.4
Shox2-204ENSMUST00000162439 A930004D18RikQ8C8W7 157 aa12.57□□□□□ -0.4
Shox2-204ENSMUST00000162439 Mrpl52Q9D0Y8 121 aa12.57□□□□□ -0.4
Shox2-204ENSMUST00000162439 Cystm1Q8K353 104 aa12.56□□□□□ -0.4
Shox2-204ENSMUST00000162439 PpdpfQ9CR37 115 aa12.56□□□□□ -0.4
Shox2-204ENSMUST00000162439 Spata45Q9CVW4 97 aa12.56□□□□□ -0.4
Shox2-204ENSMUST00000162439 Fat4Q2PZL6 4981 aa12.56□□□□□ -0.4
Shox2-204ENSMUST00000162439 Gm10139O88245 57 aa12.55□□□□□ -0.4
Shox2-204ENSMUST00000162439 Wfdc13Q5DQQ6 81 aa12.55□□□□□ -0.4
Shox2-204ENSMUST00000162439 Igkv8-18A0A0B4J1J3 123 aa12.54□□□□□ -0.4
Shox2-204ENSMUST00000162439 Cks1brtQ3UNC9 96 aa12.54□□□□□ -0.4
Shox2-204ENSMUST00000162439 Slamf6Q9ET39 351 aa12.54□□□□□ -0.4
Shox2-204ENSMUST00000162439 Defa28D3Z1V9 94 aa12.53□□□□□ -0.4
Shox2-204ENSMUST00000162439 Gm11020F6ZGD5 61 aa12.53□□□□□ -0.4
Shox2-204ENSMUST00000162439 Mrps10Q80ZK0 160 aaKnown RBP12.53□□□□□ -0.4
Shox2-204ENSMUST00000162439 Trav12-3A0A075B648 115 aa12.52□□□□□ -0.41
Shox2-204ENSMUST00000162439 2310034G01RikA0A286YDL3 209 aa12.52□□□□□ -0.41
Shox2-204ENSMUST00000162439 Cdip1Q9DB75 208 aa12.52□□□□□ -0.41
Shox2-204ENSMUST00000162439 4930442H23RikQ9D5G7 103 aa12.51□□□□□ -0.41
Shox2-204ENSMUST00000162439 Gm28305F6U473 122 aa12.5□□□□□ -0.41
Shox2-204ENSMUST00000162439 Pmp2P24526 132 aa12.49□□□□□ -0.41
Shox2-204ENSMUST00000162439 BC048502Q80Y74 154 aa12.49□□□□□ -0.41
Shox2-204ENSMUST00000162439 Igkv8-26A0A075B5N5 123 aa12.48□□□□□ -0.41
Shox2-204ENSMUST00000162439 Igkv3-10A0A0G2JGN0 119 aa12.48□□□□□ -0.41
Shox2-204ENSMUST00000162439 Wdr38Q9D994 303 aa12.48□□□□□ -0.41
Shox2-204ENSMUST00000162439 Tcl1b3P56842 122 aa12.47□□□□□ -0.41
Shox2-204ENSMUST00000162439 Smr3aQ61900 147 aa12.47□□□□□ -0.41
Shox2-204ENSMUST00000162439 Spaca4Q80ZQ0 127 aa12.47□□□□□ -0.41
Shox2-204ENSMUST00000162439 1700010B08RikQ9DAI7 102 aa12.47□□□□□ -0.41
Shox2-204ENSMUST00000162439 Trav4-3A0A0B4J1K1 110 aa12.46□□□□□ -0.41
Shox2-204ENSMUST00000162439 Gm5153P01627 120 aa12.46□□□□□ -0.41
Shox2-204ENSMUST00000162439 Vpreb1P13372 142 aa12.44□□□□□ -0.42
Shox2-204ENSMUST00000162439 Gm9805F6YK59 57 aa12.43□□□□□ -0.42
Shox2-204ENSMUST00000162439 Cypt14J3QPF7 87 aa12.43□□□□□ -0.42
Shox2-204ENSMUST00000162439 Csdc2Q91YQ3 154 aa12.43□□□□□ -0.42
Shox2-204ENSMUST00000162439 Cox8bP48772 70 aa12.41□□□□□ -0.42
Shox2-204ENSMUST00000162439 Gm29289A0A087WPY7 166 aa12.38□□□□□ -0.43
Shox2-204ENSMUST00000162439 E130218I03RikA0A0U1RNU5 63 aa12.38□□□□□ -0.43
Shox2-204ENSMUST00000162439 Dph3Q8K0W9 82 aa12.38□□□□□ -0.43
Shox2-204ENSMUST00000162439 Plac1Q9JI83 173 aa12.38□□□□□ -0.43
Shox2-204ENSMUST00000162439 Gm5767A0A0J9YTU8 78 aa12.37□□□□□ -0.43
Shox2-204ENSMUST00000162439 Stard4Q99JV5 224 aa12.37□□□□□ -0.43
Shox2-204ENSMUST00000162439 Gm44965A0A0N4SVR3 59 aa12.36□□□□□ -0.43
Shox2-204ENSMUST00000162439 Gm10770F7D043 238 aa12.36□□□□□ -0.43
Shox2-204ENSMUST00000162439 Gm9376G3UW68 176 aa12.36□□□□□ -0.43
Shox2-204ENSMUST00000162439 Ccl25O35903 144 aa12.36□□□□□ -0.43
Shox2-204ENSMUST00000162439 Gm10577Q3UDV9 132 aa12.36□□□□□ -0.43
Shox2-204ENSMUST00000162439 Ighv1-62-2A0A0A6YXZ4 119 aa12.34□□□□□ -0.43
Shox2-204ENSMUST00000162439 Gm7276Q3TYW4 209 aa12.34□□□□□ -0.43
Shox2-204ENSMUST00000162439 Igkv1-117A0A140T8M0 119 aa12.33□□□□□ -0.44
Shox2-204ENSMUST00000162439 Gm45753A0A1C7CYU8 86 aa12.33□□□□□ -0.44
Shox2-204ENSMUST00000162439 S100a8P27005 89 aa12.32□□□□□ -0.44
Shox2-204ENSMUST00000162439 2310057N15RikQ9D6T8 200 aa12.32□□□□□ -0.44
Shox2-204ENSMUST00000162439 Rpl32-psP17932 135 aa12.31□□□□□ -0.44
Shox2-204ENSMUST00000162439 Triap1Q9D8Z2 76 aa12.31□□□□□ -0.44
Shox2-204ENSMUST00000162439 Igkv1-122A0A140T8M9 119 aa12.3□□□□□ -0.44
Shox2-204ENSMUST00000162439 Rps29P62274 56 aa12.3□□□□□ -0.44
Shox2-204ENSMUST00000162439 Crct1Q6PAI5 102 aa12.29□□□□□ -0.44
Shox2-204ENSMUST00000162439 A930002H24RikQ8C8Y3 163 aa12.28□□□□□ -0.44
Shox2-204ENSMUST00000162439 Gm10320E9PW43 113 aa12.27□□□□□ -0.45
Shox2-204ENSMUST00000162439 Lst1O08843 95 aa12.27□□□□□ -0.45
Shox2-204ENSMUST00000162439 Elof1P60003 83 aa12.25□□□□□ -0.45
Shox2-204ENSMUST00000162439 Defb37Q7TMD2 62 aa12.25□□□□□ -0.45
Shox2-204ENSMUST00000162439 Igkv4-58A0A0G2JGI6 119 aa12.24□□□□□ -0.45
Shox2-204ENSMUST00000162439 LorP18165 486 aa12.24□□□□□ -0.45
Shox2-204ENSMUST00000162439 Vamp3P63024 103 aa12.24□□□□□ -0.45
Shox2-204ENSMUST00000162439 Timm17bQ9Z0V7 172 aa12.24□□□□□ -0.45
Shox2-204ENSMUST00000162439 Glrp1E9Q9S8 174 aa12.23□□□□□ -0.45
Shox2-204ENSMUST00000162439 Gm10604Q3V0X7 143 aa12.23□□□□□ -0.45
Shox2-204ENSMUST00000162439 Gm9821Q8K076 103 aa12.23□□□□□ -0.45
Shox2-204ENSMUST00000162439 MalO09198 153 aa12.22□□□□□ -0.45
Shox2-204ENSMUST00000162439 Trav13n-2A0A0G2JF93 110 aa12.21□□□□□ -0.45
Shox2-204ENSMUST00000162439 Gm19402J3QJV4 266 aa12.21□□□□□ -0.45
Shox2-204ENSMUST00000162439 Trav4n-4A0A075B615 110 aa12.2□□□□□ -0.46
Shox2-204ENSMUST00000162439 Gm11562A0PK51 136 aa12.2□□□□□ -0.46
Shox2-204ENSMUST00000162439 Gm20458E9PXJ7 78 aa12.2□□□□□ -0.46
Shox2-204ENSMUST00000162439 5930422O12RikQ8C4Y4 123 aa12.2□□□□□ -0.46
Shox2-204ENSMUST00000162439 Rnf213E9Q555 5152 aaKnown RBP12.19□□□□□ -0.46
Shox2-204ENSMUST00000162439 Scgb1b10A0A087WPW0 93 aa12.19□□□□□ -0.46
Shox2-204ENSMUST00000162439 Tmem243B2RVB9 118 aa12.18□□□□□ -0.46
Shox2-204ENSMUST00000162439 Lage3Q9CR70 148 aa12.18□□□□□ -0.46
Shox2-204ENSMUST00000162439 Gm2310J3QNJ2 377 aa12.17□□□□□ -0.46
Shox2-204ENSMUST00000162439 Plscr4P58196 326 aa12.17□□□□□ -0.46
Shox2-204ENSMUST00000162439 Defb29Q8BGW9 78 aa12.17□□□□□ -0.46
Shox2-204ENSMUST00000162439 Lamtor3O88653 124 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms