RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Gm16181B0V2H2 73 aa11.02□□□□□ -0.64
Pcdh1-203ENSMUST00000160721 2310034G01RikA0A286YDL3 209 aa11.02□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Gm21886J3QJU9 214 aa11.02□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 P01819 144 aa11.02□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 CrygaP04345 174 aa11.01□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Gm43218A0A0G2JGT0 114 aa11.01□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Gm26661M0QWV4 156 aa11.01□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Usp24B1AY13 2617 aaKnown RBP11□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Krtap16-1A2A5X5 502 aa11□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Gm44790A0A0N4SV91 103 aa10.99□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Rps28P62858 69 aaKnown RBP10.99□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 MobpQ9D2P8 170 aa10.99□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Chchd10Q7TNL9 138 aa10.99□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Gm10642Q3TWM1 71 aa10.98□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Ighv2-2A0A075B5P8 116 aa10.97□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 P01821 116 aa10.97□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Akap13E9Q394 2776 aa10.97□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Prr13Q9CQJ5 137 aa10.97□□□□□ -0.65
Pcdh1-203ENSMUST00000160721 Elof1P60003 83 aa10.95□□□□□ -0.66
Pcdh1-203ENSMUST00000160721 Hcfc1Q61191 2045 aaKnown RBP10.94□□□□□ -0.66
Pcdh1-203ENSMUST00000160721 Gm10999F6Q4M4 69 aa10.93□□□□□ -0.66
Pcdh1-203ENSMUST00000160721 Gm17606F6ZL36 78 aa10.93□□□□□ -0.66
Pcdh1-203ENSMUST00000160721 Dmac1Q9CQ00 111 aa10.91□□□□□ -0.66
Pcdh1-203ENSMUST00000160721 Gm10770F7D043 238 aa10.91□□□□□ -0.66
Pcdh1-203ENSMUST00000160721 Gm12216A0A1W2P827 62 aa10.91□□□□□ -0.66
Pcdh1-203ENSMUST00000160721 Defb50Q6TU36 73 aa10.9□□□□□ -0.66
Pcdh1-203ENSMUST00000160721 Lelp1Q9DAE3 120 aa10.9□□□□□ -0.66
Pcdh1-203ENSMUST00000160721 Gm11627A6PWP4 55 aa10.9□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 7530416G11RikJ3QJX6 159 aa10.89□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 MgaA2AWL7 3003 aaKnown RBP10.89□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 Gm17689B3GLJ4 109 aa10.88□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 E130208F15RikQ3UPV3 143 aa10.88□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 A930002H24RikQ8C8Y3 163 aa10.88□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 Cdh23Q99PF4 3354 aa10.88□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 Rpl37aP61514 92 aa10.88□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 KalrnA2CG49 2964 aa10.86□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 Gcn1E9PVA8 2671 aaKnown RBP10.86□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 Gm20661K7N787 53 aa10.85□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 AI606181Q8C7B9 129 aa10.85□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 Nsd1O88491 2588 aaKnown RBP10.85□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 Gm10308Q9CVR5 141 aa10.84□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 Limd2Q8BGB5 128 aa10.84□□□□□ -0.67
Pcdh1-203ENSMUST00000160721 Snhg11Q4G0K9 87 aa10.83□□□□□ -0.68
Pcdh1-203ENSMUST00000160721 Gm9903Q8C9Y8 129 aa10.83□□□□□ -0.68
Pcdh1-203ENSMUST00000160721 Phf5aP83870 110 aaKnown RBP10.83□□□□□ -0.68
Pcdh1-203ENSMUST00000160721 Krtap26-1Q9D7N2 215 aa10.83□□□□□ -0.68
Pcdh1-203ENSMUST00000160721 Fbn2Q61555 2907 aa10.82□□□□□ -0.68
Pcdh1-203ENSMUST00000160721 Defb1P56386 69 aa10.8□□□□□ -0.68
Pcdh1-203ENSMUST00000160721 Dmxl1Q6PNC0 3013 aa10.8□□□□□ -0.68
Pcdh1-203ENSMUST00000160721 Stab1Q8R4Y4 2571 aa10.79□□□□□ -0.68
Pcdh1-203ENSMUST00000160721 Gm10772F7AIG4 85 aa10.79□□□□□ -0.68
Pcdh1-203ENSMUST00000160721 Gm7137J3QMW1 236 aa10.78□□□□□ -0.68
Pcdh1-203ENSMUST00000160721 Gm7138L7N2C3 230 aa10.78□□□□□ -0.68
Pcdh1-203ENSMUST00000160721 Gm3238W4VSP7 230 aa10.78□□□□□ -0.68
Pcdh1-203ENSMUST00000160721 Coa5Q99M07 74 aa10.77□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 Mast4Q811L6 2618 aa10.77□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 Eif4ebp3Q80VV3 101 aa10.76□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 Q8BT88 171 aa10.75□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 Gm5617Q91VN2 117 aa10.75□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 AtmQ62388 3066 aa10.75□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 Bod1lE9Q6J5 3032 aa10.75□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 AplnQ9R0R4 77 aa10.75□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 Znf414Q9DCK4 299 aa10.75□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 Gpr15lA0A0B4J1N3 78 aa10.74□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 Spaca4Q80ZQ0 127 aa10.74□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 Gm9195A0A140LHT4 2805 aa10.74□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 RetnlbQ99P86 105 aa10.74□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 Cdc42se1Q8BHL7 80 aa10.72□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 Gm10837Q3UTT8 145 aa10.72□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 Fam168bQ80XQ8 194 aa10.71□□□□□ -0.69
Pcdh1-203ENSMUST00000160721 4930507D05RikQ8C9C9 103 aa10.7□□□□□ -0.7
Pcdh1-203ENSMUST00000160721 Prol1E9PYQ4 312 aa10.69□□□□□ -0.7
Pcdh1-203ENSMUST00000160721 Igsf10Q3V1M1 2594 aa10.69□□□□□ -0.7
Pcdh1-203ENSMUST00000160721 Fn1P11276 2477 aaKnown RBP10.69□□□□□ -0.7
Pcdh1-203ENSMUST00000160721 Itpr3P70227 2670 aa10.69□□□□□ -0.7
Pcdh1-203ENSMUST00000160721 Notch1Q01705 2531 aa10.69□□□□□ -0.7
Pcdh1-203ENSMUST00000160721 Q8BGJ3 129 aa10.67□□□□□ -0.7
Pcdh1-203ENSMUST00000160721 Psors1c2Q80ZC9 134 aa10.66□□□□□ -0.7
Pcdh1-203ENSMUST00000160721 Mp68P56379 58 aa10.66□□□□□ -0.7
Pcdh1-203ENSMUST00000160721 Krtap11-1E9Q2E9 183 aa10.66□□□□□ -0.7
Pcdh1-203ENSMUST00000160721 Phxr5P08399 672 aa10.64□□□□□ -0.71
Pcdh1-203ENSMUST00000160721 Szt2A2A9C3 3431 aa10.64□□□□□ -0.71
Pcdh1-203ENSMUST00000160721 Vps13aQ5H8C4 3166 aa10.63□□□□□ -0.71
Pcdh1-203ENSMUST00000160721 Gm27235Q3UW50 83 aa10.63□□□□□ -0.71
Pcdh1-203ENSMUST00000160721 Lypd5Q9D7Z7 256 aa10.63□□□□□ -0.71
Pcdh1-203ENSMUST00000160721 Map1aQ9QYR6 2776 aa10.62□□□□□ -0.71
Pcdh1-203ENSMUST00000160721 Ubr5Q80TP3 2792 aa10.62□□□□□ -0.71
Pcdh1-203ENSMUST00000160721 Phxr4P15974 95 aa10.6□□□□□ -0.71
Pcdh1-203ENSMUST00000160721 Ash1lQ99MY8 2958 aa10.6□□□□□ -0.71
Pcdh1-203ENSMUST00000160721 Prrc2cQ3TLH4 2846 aaKnown RBP10.59□□□□□ -0.71
Pcdh1-203ENSMUST00000160721 OxtP35454 125 aa10.59□□□□□ -0.71
Pcdh1-203ENSMUST00000160721 AY074887Q8R5F9 132 aa10.58□□□□□ -0.72
Pcdh1-203ENSMUST00000160721 A330070K13RikQ8CA53 115 aa10.57□□□□□ -0.72
Pcdh1-203ENSMUST00000160721 Gm11565A2A4M7 156 aa10.56□□□□□ -0.72
Pcdh1-203ENSMUST00000160721 Sprr4Q8CGN8 76 aa10.56□□□□□ -0.72
Pcdh1-203ENSMUST00000160721 Cfap54Q8C6S9 3106 aa10.55□□□□□ -0.72
Pcdh1-203ENSMUST00000160721 AspmQ8CJ27 3122 aa10.55□□□□□ -0.72
Pcdh1-203ENSMUST00000160721 Muc2Q80Z19 2680 aa10.54□□□□□ -0.72
Pcdh1-203ENSMUST00000160721 Dmbt1Q60997 2085 aa10.52□□□□□ -0.72
Pcdh1-203ENSMUST00000160721 Lrrc37aB1AWG4 3215 aa10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 97.2 ms