RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Golgb1E9PVZ8 3238 aa12,22□□□□□ -0,45
Sort1-203ENSMUST00000135636 Gm9821Q8K076 103 aa12,21□□□□□ -0,45
Sort1-203ENSMUST00000135636 A330070K13RikQ8CA53 115 aa12,2□□□□□ -0,46
Sort1-203ENSMUST00000135636 Gm10197F6QEY5 67 aa12,18□□□□□ -0,46
Sort1-203ENSMUST00000135636 Spint4Q9D263 159 aa12,18□□□□□ -0,46
Sort1-203ENSMUST00000135636 Spink7Q6IE32 76 aa12,16□□□□□ -0,46
Sort1-203ENSMUST00000135636 AW011738F6S7Q2 159 aa12,15□□□□□ -0,46
Sort1-203ENSMUST00000135636 Zfp462B1AWL2 2495 aaKnown RBP12,15□□□□□ -0,47
Sort1-203ENSMUST00000135636 Mp68P56379 58 aa12,14□□□□□ -0,47
Sort1-203ENSMUST00000135636 Gm9508A0A1W2P7W0 230 aa12,14□□□□□ -0,47
Sort1-203ENSMUST00000135636 Jbts17Q8CE72 3214 aa12,14□□□□□ -0,47
Sort1-203ENSMUST00000135636 Coa6Q8BGD8 79 aa12,14□□□□□ -0,47
Sort1-203ENSMUST00000135636 Gm36176A0A1W2P8D5 158 aa12,13□□□□□ -0,47
Sort1-203ENSMUST00000135636 Gm19935A0A1B0GSF9 52 aa12,11□□□□□ -0,47
Sort1-203ENSMUST00000135636 4930518I15RikQ3V2W7 57 aa12,11□□□□□ -0,47
Sort1-203ENSMUST00000135636 PtprqP0C5E4 2300 aa12,09□□□□□ -0,47
Sort1-203ENSMUST00000135636 Sprr4Q8CGN8 76 aa12,08□□□□□ -0,48
Sort1-203ENSMUST00000135636 Gm42715A0A087WP63 3095 aaKnown RBP12,08□□□□□ -0,48
Sort1-203ENSMUST00000135636 Lelp1Q9DAE3 120 aa12,07□□□□□ -0,48
Sort1-203ENSMUST00000135636 Gm20538F6Z9R1 75 aa12,04□□□□□ -0,48
Sort1-203ENSMUST00000135636 Gm10337F7DEP7 55 aa12,03□□□□□ -0,48
Sort1-203ENSMUST00000135636 Tln1P26039 2541 aaKnown RBP12,01□□□□□ -0,49
Sort1-203ENSMUST00000135636 Sprr1bQ62267 153 aa12,01□□□□□ -0,49
Sort1-203ENSMUST00000135636 Gm17349F7BGH6 99 aa12□□□□□ -0,49
Sort1-203ENSMUST00000135636 Krtap15-1Q9QZU5 150 aa12□□□□□ -0,49
Sort1-203ENSMUST00000135636 TrrapQ80YV3 2565 aaKnown RBP12□□□□□ -0,49
Sort1-203ENSMUST00000135636 AI854703Q8BIN3 203 aa11,99□□□□□ -0,49
Sort1-203ENSMUST00000135636 Cypt15B1AXS0 87 aa11,99□□□□□ -0,49
Sort1-203ENSMUST00000135636 Crip3Q6Q6R3 243 aa11,98□□□□□ -0,49
Sort1-203ENSMUST00000135636 Lypd5Q9D7Z7 256 aa11,98□□□□□ -0,49
Sort1-203ENSMUST00000135636 Chtf8P0CG14 533 aa11,98□□□□□ -0,49
Sort1-203ENSMUST00000135636 Lama3Q61789 3330 aa11,95□□□□□ -0,5
Sort1-203ENSMUST00000135636 Ptpn13Q64512 2453 aa11,92□□□□□ -0,5
Sort1-203ENSMUST00000135636 Cdc42se1Q8BHL7 80 aa11,92□□□□□ -0,5
Sort1-203ENSMUST00000135636 C530025M09RikF6RGA8 229 aa11,91□□□□□ -0,5
Sort1-203ENSMUST00000135636 Krtap26-1Q9D7N2 215 aa11,9□□□□□ -0,5
Sort1-203ENSMUST00000135636 Gm26620Q9CY65 116 aa11,89□□□□□ -0,51
Sort1-203ENSMUST00000135636 SetxA2AKX3 2646 aa11,88□□□□□ -0,51
Sort1-203ENSMUST00000135636 AY074887Q8R5F9 132 aa11,83□□□□□ -0,52
Sort1-203ENSMUST00000135636 Dmbt1Q60997 2085 aa11,82□□□□□ -0,52
Sort1-203ENSMUST00000135636 Dnah12Q3V0Q1 3086 aa11,82□□□□□ -0,52
Sort1-203ENSMUST00000135636 CicQ924A2 2510 aa11,82□□□□□ -0,52
Sort1-203ENSMUST00000135636 Coa5Q99M07 74 aa11,81□□□□□ -0,52
Sort1-203ENSMUST00000135636 Psors1c2Q80ZC9 134 aa11,81□□□□□ -0,52
Sort1-203ENSMUST00000135636 Smim29Q8R043 75 aa11,81□□□□□ -0,52
Sort1-203ENSMUST00000135636 Epg5Q80TA9 2572 aa11,8□□□□□ -0,52
Sort1-203ENSMUST00000135636 A530084C06RikQ3UTW2 186 aa11,8□□□□□ -0,52
Sort1-203ENSMUST00000135636 Ep400Q8CHI8 3072 aaKnown RBP11,79□□□□□ -0,52
Sort1-203ENSMUST00000135636 Gm9507D3Z5T3 223 aa11,77□□□□□ -0,53
Sort1-203ENSMUST00000135636 Ankrd17Q99NH0 2603 aaKnown RBP11,76□□□□□ -0,53
Sort1-203ENSMUST00000135636 Eif4ebp3Q80VV3 101 aa11,75□□□□□ -0,53
Sort1-203ENSMUST00000135636 Cep192E9Q4Y4 2514 aaKnown RBP11,74□□□□□ -0,53
Sort1-203ENSMUST00000135636 Bahcc1Q3UHR0 2643 aa11,73□□□□□ -0,53
Sort1-203ENSMUST00000135636 Gm4491E0CX42 125 aa11,71□□□□□ -0,53
Sort1-203ENSMUST00000135636 CnbpP53996 178 aaKnown RBP11,71□□□□□ -0,54
Sort1-203ENSMUST00000135636 Usp34Q6ZQ93 3582 aa11,7□□□□□ -0,54
Sort1-203ENSMUST00000135636 NbdyA0A0N4SUI7 68 aa11,69□□□□□ -0,54
Sort1-203ENSMUST00000135636 Usp9xP70398 2559 aaKnown RBP11,68□□□□□ -0,54
Sort1-203ENSMUST00000135636 2310034C09RikQ9D746 214 aa11,67□□□□□ -0,54
Sort1-203ENSMUST00000135636 Fam104aA2A6P4 185 aa11,66□□□□□ -0,54
Sort1-203ENSMUST00000135636 Gm10308Q9CVR5 141 aa11,65□□□□□ -0,54
Sort1-203ENSMUST00000135636 Fam229aB2KGE5 128 aa11,64□□□□□ -0,55
Sort1-203ENSMUST00000135636 Gm3880A0A1B0GSB3 72 aa11,63□□□□□ -0,55
Sort1-203ENSMUST00000135636 Zcchc13Q9D548 170 aa11,62□□□□□ -0,55
Sort1-203ENSMUST00000135636 Krtap10-4Q08EG8 221 aa11,62□□□□□ -0,55
Sort1-203ENSMUST00000135636 Prune2Q52KR3 3084 aa11,61□□□□□ -0,55
Sort1-203ENSMUST00000135636 Gm11213A0A1B0GR83 88 aa11,6□□□□□ -0,55
Sort1-203ENSMUST00000135636 Bod1lE9Q6J5 3032 aa11,59□□□□□ -0,55
Sort1-203ENSMUST00000135636 Gm7276Q3TYW4 209 aa11,57□□□□□ -0,56
Sort1-203ENSMUST00000135636 MtorQ9JLN9 2549 aa11,56□□□□□ -0,56
Sort1-203ENSMUST00000135636 CriptO70333 101 aa11,56□□□□□ -0,56
Sort1-203ENSMUST00000135636 Cypt14J3QPF7 87 aa11,55□□□□□ -0,56
Sort1-203ENSMUST00000135636 Nsd1O88491 2588 aaKnown RBP11,52□□□□□ -0,56
Sort1-203ENSMUST00000135636 Gm21798J3QNU5 87 aa11,52□□□□□ -0,57
Sort1-203ENSMUST00000135636 6030445D17RikE9Q8F9 148 aa11,52□□□□□ -0,57
Sort1-203ENSMUST00000135636 Krtap16-1A2A5X5 502 aa11,52□□□□□ -0,57
Sort1-203ENSMUST00000135636 Krtap10-10A0A1W2P7T6 217 aa11,48□□□□□ -0,57
Sort1-203ENSMUST00000135636 Camk2n1Q6QWF9 78 aa11,47□□□□□ -0,57
Sort1-203ENSMUST00000135636 Gm10320E9PW43 113 aa11,46□□□□□ -0,58
Sort1-203ENSMUST00000135636 Setd2E9Q5F9 2537 aa11,45□□□□□ -0,58
Sort1-203ENSMUST00000135636 Zfp292Q9Z2U2 2698 aa11,44□□□□□ -0,58
Sort1-203ENSMUST00000135636 Abca12E9Q876 2595 aa11,44□□□□□ -0,58
Sort1-203ENSMUST00000135636 Gm10065F6TJM2 114 aa11,43□□□□□ -0,58
Sort1-203ENSMUST00000135636 Smr3aQ61900 147 aa11,42□□□□□ -0,58
Sort1-203ENSMUST00000135636 Krtap13O88375 197 aa11,41□□□□□ -0,58
Sort1-203ENSMUST00000135636 Cep350E9Q309 3095 aa11,4□□□□□ -0,58
Sort1-203ENSMUST00000135636 TrioQ0KL02 3102 aa11,4□□□□□ -0,59
Sort1-203ENSMUST00000135636 Uqcr11Q9CPX8 56 aa11,38□□□□□ -0,59
Sort1-203ENSMUST00000135636 Sec61bQ9CQS8 96 aaKnown RBP11,38□□□□□ -0,59
Sort1-203ENSMUST00000135636 Gm9955Q8CEJ8 102 aa11,37□□□□□ -0,59
Sort1-203ENSMUST00000135636 Usp9yF8VPU6 2556 aa11,36□□□□□ -0,59
Sort1-203ENSMUST00000135636 Fam229bQ8CF36 80 aa11,36□□□□□ -0,59
Sort1-203ENSMUST00000135636 Unc79Q0KK59 2596 aa11,36□□□□□ -0,59
Sort1-203ENSMUST00000135636 Col12a1Q60847 3120 aa11,36□□□□□ -0,59
Sort1-203ENSMUST00000135636 CenpfE9Q3P4 2997 aaKnown RBP11,34□□□□□ -0,59
Sort1-203ENSMUST00000135636 Phxr4P15974 95 aa11,29□□□□□ -0,6
Sort1-203ENSMUST00000135636 Usp24B1AY13 2617 aaKnown RBP11,26□□□□□ -0,61
Sort1-203ENSMUST00000135636 Odf3bQ5M8M2 238 aa11,25□□□□□ -0,61
Sort1-203ENSMUST00000135636 Gm5767A0A0J9YTU8 78 aa11,22□□□□□ -0,61
Sort1-203ENSMUST00000135636 Gm19426M0QWC7 77 aa11,22□□□□□ -0,61
Retrieved 100 of 22,080 RNA–protein pairs in 34,6 ms