RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Rhox8Q6VSS7 320 aa33.63■■■□□ 2.97
Sort1-203ENSMUST00000135636 Ehmt2Q9Z148 1263 aaKnown RBP30.32■■■□□ 2.44
Sort1-203ENSMUST00000135636 Esf1Q3V1V3 845 aaKnown RBP30.12■■■□□ 2.41
Sort1-203ENSMUST00000135636 Cngb1E1AZ71 1325 aa30.01■■■□□ 2.39
Sort1-203ENSMUST00000135636 Ube2uB1AUC4 352 aa29.97■■■□□ 2.39
Sort1-203ENSMUST00000135636 Zeb1Q64318 1117 aa29.87■■■□□ 2.37
Sort1-203ENSMUST00000135636 Ccdc136Q3TVA9 1136 aa29.85■■■□□ 2.37
Sort1-203ENSMUST00000135636 Gab3Q8BSM5 595 aa29.42■■■□□ 2.3
Sort1-203ENSMUST00000135636 Npm2Q80W85 207 aa29.37■■■□□ 2.29
Sort1-203ENSMUST00000135636 Wdr66E9Q743 1299 aa29.2■■■□□ 2.27
Sort1-203ENSMUST00000135636 Myt1lP97500 1187 aa29.19■■■□□ 2.26
Sort1-203ENSMUST00000135636 Las1lA2BE28 776 aaKnown RBP28.74■■■□□ 2.19
Sort1-203ENSMUST00000135636 Il27Q8K3I6 234 aa28.5■■■□□ 2.15
Sort1-203ENSMUST00000135636 Trim41Q5NCC3 630 aa28.34■■■□□ 2.13
Sort1-203ENSMUST00000135636 Rpgrip1Q9EPQ2 1331 aa28.19■■■□□ 2.1
Sort1-203ENSMUST00000135636 Slc24a1Q91WD8 1130 aa28.14■■■□□ 2.09
Sort1-203ENSMUST00000135636 UbtfP25976 765 aaKnown RBP28.05■■■□□ 2.08
Sort1-203ENSMUST00000135636 Ap3b1Q9Z1T1 1105 aa27.97■■■□□ 2.07
Sort1-203ENSMUST00000135636 Gm35339A0A140LHH9 1649 aa27.81■■■□□ 2.04
Sort1-203ENSMUST00000135636 Pelp1Q9DBD5 1123 aaKnown RBP27.8■■■□□ 2.04
Sort1-203ENSMUST00000135636 Ifnlr1Q8CGK5 535 aa27.79■■■□□ 2.04
Sort1-203ENSMUST00000135636 Plppr3Q7TPB0 716 aa27.74■■■□□ 2.03
Sort1-203ENSMUST00000135636 Os9Q8K2C7 672 aa27.73■■■□□ 2.03
Sort1-203ENSMUST00000135636 NischQ80TM9 1593 aa27.72■■■□□ 2.03
Sort1-203ENSMUST00000135636 Neurod1Q60867 357 aa27.71■■■□□ 2.03
Sort1-203ENSMUST00000135636 Zbtb7cQ8VCZ7 619 aa27.62■■■□□ 2.01
Sort1-203ENSMUST00000135636 Abcc9P70170 1546 aa27.58■■■□□ 2.01
Sort1-203ENSMUST00000135636 HrcG5E8J6 738 aa27.42■■□□□ 1.98
Sort1-203ENSMUST00000135636 Chic1Q8CBW7 227 aa27.42■■□□□ 1.98
Sort1-203ENSMUST00000135636 Fam50aQ9WV03 339 aaKnown RBP27.41■■□□□ 1.98
Sort1-203ENSMUST00000135636 Gm13697A2AK42 830 aa27.36■■□□□ 1.97
Sort1-203ENSMUST00000135636 Amer1Q7TS75 1132 aa27.33■■□□□ 1.97
Sort1-203ENSMUST00000135636 Ttbk1Q6PCN3 1308 aa27.08■■□□□ 1.92
Sort1-203ENSMUST00000135636 Ppargc1bQ8VHJ7 1014 aa27.05■■□□□ 1.92
Sort1-203ENSMUST00000135636 Hnrnpul2Q00PI9 745 aaKnown RBP27.03■■□□□ 1.92
Sort1-203ENSMUST00000135636 Zcchc6Q5BLK4 1491 aaKnown RBP27.03■■□□□ 1.92
Sort1-203ENSMUST00000135636 Atp1b4Q99ME6 356 aa26.99■■□□□ 1.91
Sort1-203ENSMUST00000135636 Eif5bQ05D44 1216 aaKnown RBP26.96■■□□□ 1.91
Sort1-203ENSMUST00000135636 Zbtb4Q5F293 982 aa26.95■■□□□ 1.91
Sort1-203ENSMUST00000135636 Fkbp15Q6P9Q6 1216 aaKnown RBP26.87■■□□□ 1.89
Sort1-203ENSMUST00000135636 Prdm10Q3UTQ7 1184 aa26.86■■□□□ 1.89
Sort1-203ENSMUST00000135636 Erich6D3Z6S9 713 aa26.84■■□□□ 1.89
Sort1-203ENSMUST00000135636 NclP09405 707 aaKnown RBP26.82■■□□□ 1.88
Sort1-203ENSMUST00000135636 Lmod2Q3UHZ5 550 aa26.77■■□□□ 1.88
Sort1-203ENSMUST00000135636 Npm1Q61937 292 aaKnown RBP26.75■■□□□ 1.87
Sort1-203ENSMUST00000135636 Gm13695A2AK44 830 aa26.75■■□□□ 1.87
Sort1-203ENSMUST00000135636 NrdcQ8BHG1 1161 aa26.7■■□□□ 1.87
Sort1-203ENSMUST00000135636 Anp32bQ9EST5 272 aaKnown RBP26.64■■□□□ 1.86
Sort1-203ENSMUST00000135636 Stra8P70278 393 aa26.63■■□□□ 1.85
Sort1-203ENSMUST00000135636 NefmP08553 848 aa26.49■■□□□ 1.83
Sort1-203ENSMUST00000135636 NeflP08551 543 aa26.43■■□□□ 1.82
Sort1-203ENSMUST00000135636 CenpbP27790 599 aa26.3■■□□□ 1.8
Sort1-203ENSMUST00000135636 Safb2Q80YR5 991 aaKnown RBP26.28■■□□□ 1.8
Sort1-203ENSMUST00000135636 4933416C03RikQ3V063 378 aa26.25■■□□□ 1.79
Sort1-203ENSMUST00000135636 Polr3glQ8R0C0 218 aa26.25■■□□□ 1.79
Sort1-203ENSMUST00000135636 Plekhg3Q4VAC9 1341 aa26.23■■□□□ 1.79
Sort1-203ENSMUST00000135636 Rangap1P46061 589 aaKnown RBP26.22■■□□□ 1.79
Sort1-203ENSMUST00000135636 DiexfQ8BTT6 772 aaKnown RBP26.19■■□□□ 1.78
Sort1-203ENSMUST00000135636 Acin1Q9JIX8 1338 aaKnown RBP26.17■■□□□ 1.78
Sort1-203ENSMUST00000135636 Nlrp6Q91WS2 869 aa26.13■■□□□ 1.77
Sort1-203ENSMUST00000135636 Cdk11bP24788 784 aaKnown RBP26.02■■□□□ 1.76
Sort1-203ENSMUST00000135636 Mapk8ip2Q9ERE9 830 aa26■■□□□ 1.75
Sort1-203ENSMUST00000135636 Ccdc180J3QNE4 1664 aa26■■□□□ 1.75
Sort1-203ENSMUST00000135636 Ubl4bQ9CQ84 188 aa25.99■■□□□ 1.75
Sort1-203ENSMUST00000135636 P3h3Q8CG70 732 aa25.99■■□□□ 1.75
Sort1-203ENSMUST00000135636 TonslQ6NZL6 1363 aa25.95■■□□□ 1.74
Sort1-203ENSMUST00000135636 4930567H17RikQ3V0K5 233 aa25.92■■□□□ 1.74
Sort1-203ENSMUST00000135636 ArxO35085 564 aa25.88■■□□□ 1.73
Sort1-203ENSMUST00000135636 MyclP10166 368 aa25.77■■□□□ 1.72
Sort1-203ENSMUST00000135636 Nop58Q6DFW4 536 aaKnown RBP25.76■■□□□ 1.71
Sort1-203ENSMUST00000135636 Irx6Q9ER75 438 aa25.72■■□□□ 1.71
Sort1-203ENSMUST00000135636 Mier1Q5UAK0 511 aa25.68■■□□□ 1.7
Sort1-203ENSMUST00000135636 Rtl1Q7M732 1744 aa25.61■■□□□ 1.69
Sort1-203ENSMUST00000135636 Eid3Q3V124 375 aa25.58■■□□□ 1.69
Sort1-203ENSMUST00000135636 Chic2Q9D9G3 165 aa25.55■■□□□ 1.68
Sort1-203ENSMUST00000135636 Csrnp3P59055 597 aa25.51■■□□□ 1.67
Sort1-203ENSMUST00000135636 Tnnt3Q9QZ47 272 aa25.39■■□□□ 1.65
Sort1-203ENSMUST00000135636 NgefQ8CHT1 710 aa25.37■■□□□ 1.65
Sort1-203ENSMUST00000135636 Hdac5Q9Z2V6 1113 aa25.35■■□□□ 1.65
Sort1-203ENSMUST00000135636 Trim26Q99PN3 545 aa25.32■■□□□ 1.64
Sort1-203ENSMUST00000135636 Rad21Q61550 635 aaKnown RBP25.31■■□□□ 1.64
Sort1-203ENSMUST00000135636 Supt5hO55201 1082 aaKnown RBP25.3■■□□□ 1.64
Sort1-203ENSMUST00000135636 Rtn4Q99P72 1162 aaKnown RBP25.29■■□□□ 1.64
Sort1-203ENSMUST00000135636 Ythdc1E9Q5K9 736 aaKnown RBP25.28■■□□□ 1.64
Sort1-203ENSMUST00000135636 Pcgf6Q99NA9 353 aa25.22■■□□□ 1.63
Sort1-203ENSMUST00000135636 Arhgap27A2AB59 869 aa25.15■■□□□ 1.62
Sort1-203ENSMUST00000135636 Ppp1r18Q8BQ30 594 aa25.15■■□□□ 1.62
Sort1-203ENSMUST00000135636 Clip1Q922J3 1391 aa25.15■■□□□ 1.62
Sort1-203ENSMUST00000135636 Ggt6Q6PDE7 497 aa25.12■■□□□ 1.61
Sort1-203ENSMUST00000135636 Clstn1Q9EPL2 979 aa25.11■■□□□ 1.61
Sort1-203ENSMUST00000135636 MlecQ6ZQI3 291 aaKnown RBP25.05■■□□□ 1.6
Sort1-203ENSMUST00000135636 Fgd1P52734 960 aa25.04■■□□□ 1.6
Sort1-203ENSMUST00000135636 DaxxO35613 739 aa25.03■■□□□ 1.6
Sort1-203ENSMUST00000135636 Ubap1lG3UW59 384 aa25.03■■□□□ 1.6
Sort1-203ENSMUST00000135636 Kdm2aP59997 1161 aa25.02■■□□□ 1.6
Sort1-203ENSMUST00000135636 Gm38655A0A286YDK6 273 aa24.99■■□□□ 1.59
Sort1-203ENSMUST00000135636 Ecm2Q5FW85 670 aa24.98■■□□□ 1.59
Sort1-203ENSMUST00000135636 Vsig10D3YX43 558 aa24.98■■□□□ 1.59
Sort1-203ENSMUST00000135636 Znf326O88291 580 aa24.95■■□□□ 1.59
Sort1-203ENSMUST00000135636 Q8BT18 775 aa24.95■■□□□ 1.59
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms