RNA–Protein interactions for RNA: ENSMUST00000118242.7

Limch1-204, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Limch1, Length 5,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-204ENSMUST00000118242 Gm16181B0V2H2 73 aa8.12□□□□□ -1.11
Limch1-204ENSMUST00000118242 Gm3646F6S692 53 aa8.12□□□□□ -1.11
Limch1-204ENSMUST00000118242 1700042G07RikB1AUF7 90 aa8.12□□□□□ -1.11
Limch1-204ENSMUST00000118242 Gm27235Q3UW50 83 aa8.12□□□□□ -1.11
Limch1-204ENSMUST00000118242 1600014C23RikQ9DAX4 101 aa8.12□□□□□ -1.11
Limch1-204ENSMUST00000118242 Hivep2Q3UHF7 2430 aa8.11□□□□□ -1.11
Limch1-204ENSMUST00000118242 Phf5aP83870 110 aaKnown RBP8.1□□□□□ -1.11
Limch1-204ENSMUST00000118242 Abca2P41234 2434 aa8.1□□□□□ -1.11
Limch1-204ENSMUST00000118242 Fam168bQ80XQ8 194 aa8.09□□□□□ -1.11
Limch1-204ENSMUST00000118242 Tln1P26039 2541 aaKnown RBP8.09□□□□□ -1.11
Limch1-204ENSMUST00000118242 Smim29Q8R043 75 aa8.07□□□□□ -1.12
Limch1-204ENSMUST00000118242 Rnase13Q5GAM7 153 aa8.06□□□□□ -1.12
Limch1-204ENSMUST00000118242 Dmbt1Q60997 2085 aa8.06□□□□□ -1.12
Limch1-204ENSMUST00000118242 4933415A04RikQ9D443 101 aa8.06□□□□□ -1.12
Limch1-204ENSMUST00000118242 Zfyve26Q5DU37 2529 aa8.05□□□□□ -1.12
Limch1-204ENSMUST00000118242 Lypd5Q9D7Z7 256 aa8.05□□□□□ -1.12
Limch1-204ENSMUST00000118242 Gm9821Q8K076 103 aa8.03□□□□□ -1.12
Limch1-204ENSMUST00000118242 Gm21798J3QNU5 87 aa8.01□□□□□ -1.13
Limch1-204ENSMUST00000118242 Pla2g10Q9QXX3 151 aa8.01□□□□□ -1.13
Limch1-204ENSMUST00000118242 Gm10320E9PW43 113 aa8□□□□□ -1.13
Limch1-204ENSMUST00000118242 Zfp462B1AWL2 2495 aaKnown RBP8□□□□□ -1.13
Limch1-204ENSMUST00000118242 Defb2P82020 71 aa8□□□□□ -1.13
Limch1-204ENSMUST00000118242 PolqQ8CGS6 2544 aa7.99□□□□□ -1.13
Limch1-204ENSMUST00000118242 Zcchc13Q9D548 170 aa7.99□□□□□ -1.13
Limch1-204ENSMUST00000118242 Cypt14J3QPF7 87 aa7.98□□□□□ -1.13
Limch1-204ENSMUST00000118242 Spaca4Q80ZQ0 127 aa7.97□□□□□ -1.13
Limch1-204ENSMUST00000118242 SrcapA0A087WQ44 3271 aa7.97□□□□□ -1.13
Limch1-204ENSMUST00000118242 Gpr15lA0A0B4J1N3 78 aa7.97□□□□□ -1.13
Limch1-204ENSMUST00000118242 Cep192E9Q4Y4 2514 aaKnown RBP7.96□□□□□ -1.14
Limch1-204ENSMUST00000118242 Fam104aA2A6P4 185 aa7.94□□□□□ -1.14
Limch1-204ENSMUST00000118242 Gm20538F6Z9R1 75 aa7.94□□□□□ -1.14
Limch1-204ENSMUST00000118242 PtprqP0C5E4 2300 aa7.94□□□□□ -1.14
Limch1-204ENSMUST00000118242 CriptO70333 101 aa7.93□□□□□ -1.14
Limch1-204ENSMUST00000118242 2310034C09RikQ9D746 214 aa7.91□□□□□ -1.14
Limch1-204ENSMUST00000118242 Usp9xP70398 2559 aaKnown RBP7.91□□□□□ -1.14
Limch1-204ENSMUST00000118242 Gm3880A0A1B0GSB3 72 aa7.91□□□□□ -1.14
Limch1-204ENSMUST00000118242 Lrrk2Q5S006 2527 aa7.9□□□□□ -1.15
Limch1-204ENSMUST00000118242 A730071L15RikQ8C4X0 137 aa7.89□□□□□ -1.15
Limch1-204ENSMUST00000118242 Spata3Q9D9T6 193 aa7.88□□□□□ -1.15
Limch1-204ENSMUST00000118242 Krtap24-1G3X9A2 248 aa7.88□□□□□ -1.15
Limch1-204ENSMUST00000118242 Ttc28Q80XJ3 2450 aa7.87□□□□□ -1.15
Limch1-204ENSMUST00000118242 6030445D17RikE9Q8F9 148 aa7.84□□□□□ -1.16
Limch1-204ENSMUST00000118242 Ly6g6cQ9Z1Q4 126 aa7.84□□□□□ -1.16
Limch1-204ENSMUST00000118242 Pkd1l2Q7TN88 2461 aa7.84□□□□□ -1.16
Limch1-204ENSMUST00000118242 Gm37013Q8K491 104 aa7.82□□□□□ -1.16
Limch1-204ENSMUST00000118242 Gm9955Q8CEJ8 102 aa7.81□□□□□ -1.16
Limch1-204ENSMUST00000118242 Setd2E9Q5F9 2537 aa7.79□□□□□ -1.16
Limch1-204ENSMUST00000118242 Gm3285A0A1W2P7U0 201 aa7.78□□□□□ -1.16
Limch1-204ENSMUST00000118242 Defb9Q8R2I6 67 aa7.77□□□□□ -1.17
Limch1-204ENSMUST00000118242 Odf3bQ5M8M2 238 aa7.7□□□□□ -1.18
Limch1-204ENSMUST00000118242 Nbeal1E9PYP2 2688 aa7.69□□□□□ -1.18
Limch1-204ENSMUST00000118242 Anapc11Q9CPX9 84 aa7.69□□□□□ -1.18
Limch1-204ENSMUST00000118242 Ptpn13Q64512 2453 aa7.68□□□□□ -1.18
Limch1-204ENSMUST00000118242 AW011738F6S7Q2 159 aa7.68□□□□□ -1.18
Limch1-204ENSMUST00000118242 SetxA2AKX3 2646 aa7.67□□□□□ -1.18
Limch1-204ENSMUST00000118242 Gm10139O88245 57 aa7.67□□□□□ -1.18
Limch1-204ENSMUST00000118242 Defb10Q8R2I8 73 aa7.64□□□□□ -1.19
Limch1-204ENSMUST00000118242 Sptbn4E9PX29 2561 aa7.63□□□□□ -1.19
Limch1-204ENSMUST00000118242 Notch2O35516 2470 aa7.59□□□□□ -1.19
Limch1-204ENSMUST00000118242 Plac8Q9JI48 112 aa7.59□□□□□ -1.19
Limch1-204ENSMUST00000118242 MtorQ9JLN9 2549 aa7.58□□□□□ -1.2
Limch1-204ENSMUST00000118242 Romo1P60603 79 aa7.58□□□□□ -1.2
Limch1-204ENSMUST00000118242 CenpfE9Q3P4 2997 aaKnown RBP7.56□□□□□ -1.2
Limch1-204ENSMUST00000118242 Piezo1E2JF22 2547 aa7.56□□□□□ -1.2
Limch1-204ENSMUST00000118242 Gm4491E0CX42 125 aa7.56□□□□□ -1.2
Limch1-204ENSMUST00000118242 Sprr1aQ62266 144 aa7.54□□□□□ -1.2
Limch1-204ENSMUST00000118242 Epg5Q80TA9 2572 aa7.53□□□□□ -1.2
Limch1-204ENSMUST00000118242 NbdyA0A0N4SUI7 68 aa7.51□□□□□ -1.21
Limch1-204ENSMUST00000118242 Gm16253D3Z167 63 aa7.51□□□□□ -1.21
Limch1-204ENSMUST00000118242 Gm10065F6TJM2 114 aa7.49□□□□□ -1.21
Limch1-204ENSMUST00000118242 Chd8Q09XV5 2582 aaKnown RBP7.49□□□□□ -1.21
Limch1-204ENSMUST00000118242 Bahcc1Q3UHR0 2643 aa7.49□□□□□ -1.21
Limch1-204ENSMUST00000118242 Rpl37Q9D823 97 aa7.49□□□□□ -1.21
Limch1-204ENSMUST00000118242 Usp9yF8VPU6 2556 aa7.48□□□□□ -1.21
Limch1-204ENSMUST00000118242 Gm3250E9Q1M3 230 aa7.47□□□□□ -1.21
Limch1-204ENSMUST00000118242 Gm2310J3QNJ2 377 aa7.45□□□□□ -1.22
Limch1-204ENSMUST00000118242 Gm10382Q3V0T5 144 aa7.42□□□□□ -1.22
Limch1-204ENSMUST00000118242 HrnrQ8VHD8 2496 aa7.39□□□□□ -1.23
Limch1-204ENSMUST00000118242 TrrapQ80YV3 2565 aaKnown RBP7.37□□□□□ -1.23
Limch1-204ENSMUST00000118242 Gm11565A2A4M7 156 aa7.36□□□□□ -1.23
Limch1-204ENSMUST00000118242 Ndufaf8A2AMZ4 74 aa7.34□□□□□ -1.23
Limch1-204ENSMUST00000118242 Defb11Q8R2I7 77 aa7.34□□□□□ -1.24
Limch1-204ENSMUST00000118242 Prrc2cQ3TLH4 2846 aaKnown RBP7.33□□□□□ -1.24
Limch1-204ENSMUST00000118242 Cox6b2Q80ZN9 88 aa7.32□□□□□ -1.24
Limch1-204ENSMUST00000118242 Fam229aB2KGE5 128 aa7.32□□□□□ -1.24
Limch1-204ENSMUST00000118242 Gcn1E9PVA8 2671 aaKnown RBP7.32□□□□□ -1.24
Limch1-204ENSMUST00000118242 Abca12E9Q876 2595 aa7.3□□□□□ -1.24
Limch1-204ENSMUST00000118242 Golgb1E9PVZ8 3238 aa7.3□□□□□ -1.24
Limch1-204ENSMUST00000118242 Ankrd17Q99NH0 2603 aaKnown RBP7.3□□□□□ -1.24
Limch1-204ENSMUST00000118242 Lelp1Q9DAE3 120 aa7.29□□□□□ -1.24
Limch1-204ENSMUST00000118242 OxtP35454 125 aa7.27□□□□□ -1.25
Limch1-204ENSMUST00000118242 Krtap14O08640 167 aa7.26□□□□□ -1.25
Limch1-204ENSMUST00000118242 Myo18bE9PV66 2605 aa7.24□□□□□ -1.25
Limch1-204ENSMUST00000118242 Zfp292Q9Z2U2 2698 aa7.22□□□□□ -1.25
Limch1-204ENSMUST00000118242 Spink7Q6IE32 76 aa7.2□□□□□ -1.26
Limch1-204ENSMUST00000118242 Nsd1O88491 2588 aaKnown RBP7.18□□□□□ -1.26
Limch1-204ENSMUST00000118242 Unc79Q0KK59 2596 aa7.18□□□□□ -1.26
Limch1-204ENSMUST00000118242 Gm3233E9Q2H5 230 aa7.18□□□□□ -1.26
Limch1-204ENSMUST00000118242 Camk2n1Q6QWF9 78 aa7.17□□□□□ -1.26
Limch1-204ENSMUST00000118242 Gm9112A2AI92 75 aa7.16□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 96.4 ms