RNA–Protein interactions for RNA: ENSMUST00000112874.3

Nck1-201, Transcript of Cytoplasmic protein NCK1, mousemouse

TSL 1 (best) BASIC

Gene Nck1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-201ENSMUST00000112874 Gm3285A0A1W2P7U0 201 aa3.66□□□□□ -1.82
Nck1-201ENSMUST00000112874 Defb4P82019 63 aa3.66□□□□□ -1.82
Nck1-201ENSMUST00000112874 Snhg11Q4G0K9 87 aa3.66□□□□□ -1.82
Nck1-201ENSMUST00000112874 Myo15bI7HPW8 3033 aa3.66□□□□□ -1.82
Nck1-201ENSMUST00000112874 Krtap17-1A2A5X6 109 aa3.65□□□□□ -1.83
Nck1-201ENSMUST00000112874 Gm21798J3QNU5 87 aa3.65□□□□□ -1.83
Nck1-201ENSMUST00000112874 Gm17416Q30KP4 66 aa3.65□□□□□ -1.83
Nck1-201ENSMUST00000112874 Igkv4-70A0A0B4J1I5 116 aa3.63□□□□□ -1.83
Nck1-201ENSMUST00000112874 TectaO08523 2155 aa3.62□□□□□ -1.83
Nck1-201ENSMUST00000112874 3110018I06RikQ9CXS0 120 aa3.62□□□□□ -1.83
Nck1-201ENSMUST00000112874 Piezo2Q8CD54 2822 aa3.62□□□□□ -1.83
Nck1-201ENSMUST00000112874 Spag17Q5S003 2320 aa3.62□□□□□ -1.83
Nck1-201ENSMUST00000112874 Gm3880A0A1B0GSB3 72 aa3.61□□□□□ -1.83
Nck1-201ENSMUST00000112874 CriptO70333 101 aa3.61□□□□□ -1.83
Nck1-201ENSMUST00000112874 Gm6040Q4QY32 63 aa3.61□□□□□ -1.83
Nck1-201ENSMUST00000112874 Defb7Q91V70 71 aa3.61□□□□□ -1.83
Nck1-201ENSMUST00000112874 Gm7579A0A1B0GRJ4 243 aa3.6□□□□□ -1.83
Nck1-201ENSMUST00000112874 Gm10142J3KMP7 120 aa3.6□□□□□ -1.83
Nck1-201ENSMUST00000112874 ClcP97400 68 aa3.6□□□□□ -1.83
Nck1-201ENSMUST00000112874 Gm5105Q8C6Y9 112 aa3.6□□□□□ -1.83
Nck1-201ENSMUST00000112874 NacaP70670 2187 aaKnown RBP3.6□□□□□ -1.83
Nck1-201ENSMUST00000112874 Defb50Q6TU36 73 aa3.6□□□□□ -1.83
Nck1-201ENSMUST00000112874 Zcchc13Q9D548 170 aa3.6□□□□□ -1.83
Nck1-201ENSMUST00000112874 Gm42715A0A087WP63 3095 aaKnown RBP3.59□□□□□ -1.84
Nck1-201ENSMUST00000112874 Gm40193A0A1B0GT39 78 aa3.59□□□□□ -1.84
Nck1-201ENSMUST00000112874 Tmem167aQ9CR64 72 aa3.59□□□□□ -1.84
Nck1-201ENSMUST00000112874 Urb1Q571H0 2274 aaKnown RBP3.58□□□□□ -1.84
Nck1-201ENSMUST00000112874 Cep350E9Q309 3095 aa3.58□□□□□ -1.84
Nck1-201ENSMUST00000112874 Igkv4-62A0A0G2JDW9 117 aa3.58□□□□□ -1.84
Nck1-201ENSMUST00000112874 A730009L09RikA0A1B0GS82 72 aa3.58□□□□□ -1.84
Nck1-201ENSMUST00000112874 Krtap1-3A2A588 173 aa3.58□□□□□ -1.84
Nck1-201ENSMUST00000112874 Abca1P41233 2261 aa3.58□□□□□ -1.84
Nck1-201ENSMUST00000112874 Defb48Q3UW22 87 aa3.56□□□□□ -1.84
Nck1-201ENSMUST00000112874 Krtap29-1A2A5X4 342 aa3.55□□□□□ -1.84
Nck1-201ENSMUST00000112874 Szt2A2A9C3 3431 aa3.54□□□□□ -1.84
Nck1-201ENSMUST00000112874 Igkv4-68A0A0B4J1I7 117 aa3.54□□□□□ -1.84
Nck1-201ENSMUST00000112874 Cox6b2Q80ZN9 88 aa3.54□□□□□ -1.84
Nck1-201ENSMUST00000112874 Spink2Q8BMY7 86 aa3.54□□□□□ -1.84
Nck1-201ENSMUST00000112874 Rnase2aQ8K196 155 aa3.54□□□□□ -1.84
Nck1-201ENSMUST00000112874 Sorl1O88307 2215 aaKnown RBP3.54□□□□□ -1.84
Nck1-201ENSMUST00000112874 Col6a3E9PWQ3 3284 aa3.53□□□□□ -1.84
Nck1-201ENSMUST00000112874 Gm10267M0QWD8 85 aa3.53□□□□□ -1.84
Nck1-201ENSMUST00000112874 Mapk1ip1lQ8BH93 242 aa3.53□□□□□ -1.84
Nck1-201ENSMUST00000112874 AplnQ9R0R4 77 aa3.53□□□□□ -1.84
Nck1-201ENSMUST00000112874 Defb35Q8R2I3 63 aa3.52□□□□□ -1.85
Nck1-201ENSMUST00000112874 Flg2Q2VIS4 2362 aa3.52□□□□□ -1.85
Nck1-201ENSMUST00000112874 Cacna1eQ61290 2272 aa3.51□□□□□ -1.85
Nck1-201ENSMUST00000112874 Igkv4-72A0A0B4J1I4 117 aa3.51□□□□□ -1.85
Nck1-201ENSMUST00000112874 Gm20537G3UYK7 97 aa3.51□□□□□ -1.85
Nck1-201ENSMUST00000112874 PrcdQ00LT2 53 aa3.51□□□□□ -1.85
Nck1-201ENSMUST00000112874 RttnQ8R4Y8 2226 aa3.51□□□□□ -1.85
Nck1-201ENSMUST00000112874 Cep295Q8BQ48 2412 aa3.5□□□□□ -1.85
Nck1-201ENSMUST00000112874 Gm10772F7AIG4 85 aa3.49□□□□□ -1.85
Nck1-201ENSMUST00000112874 Krtap5-5Q2TA51 241 aa3.49□□□□□ -1.85
Nck1-201ENSMUST00000112874 Usf3B2RUQ2 2221 aa3.48□□□□□ -1.85
Nck1-201ENSMUST00000112874 Dnajc13D4AFX7 2248 aaKnown RBP3.48□□□□□ -1.85
Nck1-201ENSMUST00000112874 HttP42859 3119 aa3.48□□□□□ -1.85
Nck1-201ENSMUST00000112874 Dopey2Q3UHQ6 2295 aa3.48□□□□□ -1.85
Nck1-201ENSMUST00000112874 Bdp1Q571C7 2467 aa3.48□□□□□ -1.85
Nck1-201ENSMUST00000112874 Gm10382Q3V0T5 144 aa3.48□□□□□ -1.85
Nck1-201ENSMUST00000112874 F8Q06194 2319 aa3.48□□□□□ -1.85
Nck1-201ENSMUST00000112874 Fam208bQ5DTT3 2382 aa3.47□□□□□ -1.85
Nck1-201ENSMUST00000112874 Abca4O35600 2310 aa3.47□□□□□ -1.85
Nck1-201ENSMUST00000112874 Kmt2bO08550 2713 aa3.46□□□□□ -1.86
Nck1-201ENSMUST00000112874 Lynx1P0DP60 116 aa3.46□□□□□ -1.86
Nck1-201ENSMUST00000112874 Gm10642Q3TWM1 71 aa3.46□□□□□ -1.86
Nck1-201ENSMUST00000112874 Sprr1bQ62267 153 aa3.45□□□□□ -1.86
Nck1-201ENSMUST00000112874 Kntc1Q8C3Y4 2207 aa3.45□□□□□ -1.86
Nck1-201ENSMUST00000112874 Gm10384Q3UQ87 92 aa3.44□□□□□ -1.86
Nck1-201ENSMUST00000112874 Wfdc15aQ8BH89 80 aa3.44□□□□□ -1.86
Nck1-201ENSMUST00000112874 Gm4707V9GXN5 68 aa3.44□□□□□ -1.86
Nck1-201ENSMUST00000112874 Chd8Q09XV5 2582 aaKnown RBP3.44□□□□□ -1.86
Nck1-201ENSMUST00000112874 Cep290Q6A078 2472 aa3.44□□□□□ -1.86
Nck1-201ENSMUST00000112874 Defb40Q70KL2 73 aa3.44□□□□□ -1.86
Nck1-201ENSMUST00000112874 Krtap7-1Q9D3I6 87 aa3.44□□□□□ -1.86
Nck1-201ENSMUST00000112874 2310061N02RikQ9D6S9 174 aa3.44□□□□□ -1.86
Nck1-201ENSMUST00000112874 Dopey1Q8BL99 2399 aa3.43□□□□□ -1.86
Nck1-201ENSMUST00000112874 Prpf8Q99PV0 2335 aaKnown RBP3.43□□□□□ -1.86
Nck1-201ENSMUST00000112874 Jbts17Q8CE72 3214 aa3.43□□□□□ -1.86
Nck1-201ENSMUST00000112874 Ep400Q8CHI8 3072 aaKnown RBP3.42□□□□□ -1.86
Nck1-201ENSMUST00000112874 Defb25Q30KN8 71 aa3.41□□□□□ -1.86
Nck1-201ENSMUST00000112874 Defb38Q7TNV7 63 aa3.41□□□□□ -1.86
Nck1-201ENSMUST00000112874 Defb14Q7TNV9 67 aa3.41□□□□□ -1.86
Nck1-201ENSMUST00000112874 Zfp292Q9Z2U2 2698 aa3.41□□□□□ -1.86
Nck1-201ENSMUST00000112874 Tep1P97499 2629 aa3.4□□□□□ -1.86
Nck1-201ENSMUST00000112874 Defb18Q30KP5 85 aa3.4□□□□□ -1.86
Nck1-201ENSMUST00000112874 Armcx4E9PWM3 2356 aa3.39□□□□□ -1.87
Nck1-201ENSMUST00000112874 Ncor2Q9WU42 2472 aaKnown RBP3.39□□□□□ -1.87
Nck1-201ENSMUST00000112874 Lama3Q61789 3330 aa3.38□□□□□ -1.87
Nck1-201ENSMUST00000112874 Minos1Q7TNS2 76 aa3.38□□□□□ -1.87
Nck1-201ENSMUST00000112874 Gm7173A0A0G2JEB6 3132 aa3.37□□□□□ -1.87
Nck1-201ENSMUST00000112874 Asxl3Q8C4A5 2259 aa3.37□□□□□ -1.87
Nck1-201ENSMUST00000112874 Cacna1hO88427 2365 aa3.37□□□□□ -1.87
Nck1-201ENSMUST00000112874 Gm10318A0A1W2P728 225 aa3.36□□□□□ -1.87
Nck1-201ENSMUST00000112874 Rpl37Q9D823 97 aa3.36□□□□□ -1.87
Nck1-201ENSMUST00000112874 Akap6E9Q9K8 2307 aa3.36□□□□□ -1.87
Nck1-201ENSMUST00000112874 C2cd3Q52KB6 2323 aa3.36□□□□□ -1.87
Nck1-201ENSMUST00000112874 MgaA2AWL7 3003 aaKnown RBP3.35□□□□□ -1.87
Nck1-201ENSMUST00000112874 Ankrd11E9Q4F7 2643 aa3.35□□□□□ -1.87
Nck1-201ENSMUST00000112874 Plce1Q8K4S1 2282 aa3.35□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 68.2 ms