RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Q9DAB9 146 aa12.87□□□□□ -0.35
Trim71-201ENSMUST00000111816 Defb1P56386 69 aa12.87□□□□□ -0.35
Trim71-201ENSMUST00000111816 AI854703Q8BIN3 203 aa12.87□□□□□ -0.35
Trim71-201ENSMUST00000111816 A930009A15RikG3UYI6 118 aa12.86□□□□□ -0.35
Trim71-201ENSMUST00000111816 Znf580Q9DB38 172 aa12.85□□□□□ -0.35
Trim71-201ENSMUST00000111816 Gm10770F7D043 238 aa12.83□□□□□ -0.36
Trim71-201ENSMUST00000111816 Gm3443F7CCV5 94 aa12.83□□□□□ -0.36
Trim71-201ENSMUST00000111816 9530053A07RikE9PVG8 2581 aa12.82□□□□□ -0.36
Trim71-201ENSMUST00000111816 Gm10642Q3TWM1 71 aa12.81□□□□□ -0.36
Trim71-201ENSMUST00000111816 Gm11213A0A1B0GR83 88 aa12.81□□□□□ -0.36
Trim71-201ENSMUST00000111816 Gm9903Q8C9Y8 129 aa12.81□□□□□ -0.36
Trim71-201ENSMUST00000111816 Gm44790A0A0N4SV91 103 aa12.8□□□□□ -0.36
Trim71-201ENSMUST00000111816 Gm9767G3X930 207 aa12.79□□□□□ -0.36
Trim71-201ENSMUST00000111816 Cypt15B1AXS0 87 aa12.78□□□□□ -0.36
Trim71-201ENSMUST00000111816 3110070M22RikQ9DAQ7 118 aa12.77□□□□□ -0.37
Trim71-201ENSMUST00000111816 Gm5464Q3UY29 175 aa12.77□□□□□ -0.37
Trim71-201ENSMUST00000111816 Gm27235Q3UW50 83 aa12.74□□□□□ -0.37
Trim71-201ENSMUST00000111816 Gpr15lA0A0B4J1N3 78 aa12.71□□□□□ -0.37
Trim71-201ENSMUST00000111816 Gm17689B3GLJ4 109 aa12.71□□□□□ -0.37
Trim71-201ENSMUST00000111816 Gm5617Q91VN2 117 aa12.7□□□□□ -0.38
Trim71-201ENSMUST00000111816 Gcn1E9PVA8 2671 aaKnown RBP12.69□□□□□ -0.38
Trim71-201ENSMUST00000111816 AtrQ9JKK8 2635 aa12.68□□□□□ -0.38
Trim71-201ENSMUST00000111816 Nsd1O88491 2588 aaKnown RBP12.65□□□□□ -0.38
Trim71-201ENSMUST00000111816 Gm10837Q3UTT8 145 aa12.65□□□□□ -0.38
Trim71-201ENSMUST00000111816 Defb10Q8R2I8 73 aa12.63□□□□□ -0.39
Trim71-201ENSMUST00000111816 Znf575Q3TXZ1 239 aa12.62□□□□□ -0.39
Trim71-201ENSMUST00000111816 Spaca4Q80ZQ0 127 aa12.62□□□□□ -0.39
Trim71-201ENSMUST00000111816 Pla2g2cP48076 150 aa12.61□□□□□ -0.39
Trim71-201ENSMUST00000111816 Map1aQ9QYR6 2776 aa12.59□□□□□ -0.39
Trim71-201ENSMUST00000111816 Gm16181B0V2H2 73 aa12.59□□□□□ -0.39
Trim71-201ENSMUST00000111816 Wisp2Q9Z0G4 251 aa12.58□□□□□ -0.4
Trim71-201ENSMUST00000111816 Rpl37aP61514 92 aa12.56□□□□□ -0.4
Trim71-201ENSMUST00000111816 Gm9573F7C950 1606 aa12.55□□□□□ -0.4
Trim71-201ENSMUST00000111816 Bri3P28662 125 aa12.54□□□□□ -0.4
Trim71-201ENSMUST00000111816 FlnaQ8BTM8 2647 aaKnown RBP12.54□□□□□ -0.4
Trim71-201ENSMUST00000111816 Psors1c2Q80ZC9 134 aa12.52□□□□□ -0.4
Trim71-201ENSMUST00000111816 FlnbQ80X90 2602 aaKnown RBP12.5□□□□□ -0.41
Trim71-201ENSMUST00000111816 Q8BT88 171 aa12.5□□□□□ -0.41
Trim71-201ENSMUST00000111816 Mast4Q811L6 2618 aa12.46□□□□□ -0.41
Trim71-201ENSMUST00000111816 MobpQ9D2P8 170 aa12.46□□□□□ -0.42
Trim71-201ENSMUST00000111816 Gm21798J3QNU5 87 aa12.45□□□□□ -0.42
Trim71-201ENSMUST00000111816 Phf5aP83870 110 aaKnown RBP12.44□□□□□ -0.42
Trim71-201ENSMUST00000111816 Lce6aD3YV94 81 aa12.42□□□□□ -0.42
Trim71-201ENSMUST00000111816 Prr9Q8BV84 116 aa12.41□□□□□ -0.42
Trim71-201ENSMUST00000111816 E130208F15RikQ3UPV3 143 aa12.41□□□□□ -0.42
Trim71-201ENSMUST00000111816 Defb11Q8R2I7 77 aa12.4□□□□□ -0.42
Trim71-201ENSMUST00000111816 Tep1P97499 2629 aa12.4□□□□□ -0.42
Trim71-201ENSMUST00000111816 Defb2P82020 71 aa12.39□□□□□ -0.43
Trim71-201ENSMUST00000111816 Gm9955Q8CEJ8 102 aa12.38□□□□□ -0.43
Trim71-201ENSMUST00000111816 Igsf10Q3V1M1 2594 aa12.38□□□□□ -0.43
Trim71-201ENSMUST00000111816 Golgb1E9PVZ8 3238 aa12.37□□□□□ -0.43
Trim71-201ENSMUST00000111816 Camk2n1Q6QWF9 78 aa12.37□□□□□ -0.43
Trim71-201ENSMUST00000111816 Lypd5Q9D7Z7 256 aa12.36□□□□□ -0.43
Trim71-201ENSMUST00000111816 Cypt14J3QPF7 87 aa12.36□□□□□ -0.43
Trim71-201ENSMUST00000111816 Chtf8P0CG14 533 aa12.35□□□□□ -0.43
Trim71-201ENSMUST00000111816 Zfp292Q9Z2U2 2698 aa12.33□□□□□ -0.44
Trim71-201ENSMUST00000111816 Chd6A3KFM7 2711 aa12.3□□□□□ -0.44
Trim71-201ENSMUST00000111816 Gm3880A0A1B0GSB3 72 aa12.3□□□□□ -0.44
Trim71-201ENSMUST00000111816 Col4a2P08122 1707 aa12.3□□□□□ -0.44
Trim71-201ENSMUST00000111816 Snhg11Q4G0K9 87 aa12.29□□□□□ -0.44
Trim71-201ENSMUST00000111816 Gm7276Q3TYW4 209 aa12.29□□□□□ -0.44
Trim71-201ENSMUST00000111816 CnbpP53996 178 aaKnown RBP12.28□□□□□ -0.44
Trim71-201ENSMUST00000111816 Stab2Q8R4U0 2559 aa12.28□□□□□ -0.44
Trim71-201ENSMUST00000111816 Jbts17Q8CE72 3214 aa12.28□□□□□ -0.44
Trim71-201ENSMUST00000111816 Spata3Q9D9T6 193 aa12.27□□□□□ -0.45
Trim71-201ENSMUST00000111816 Gm9195A0A140LHT4 2805 aa12.24□□□□□ -0.45
Trim71-201ENSMUST00000111816 Gm26620Q9CY65 116 aa12.22□□□□□ -0.45
Trim71-201ENSMUST00000111816 Fam168bQ80XQ8 194 aa12.22□□□□□ -0.45
Trim71-201ENSMUST00000111816 Spink7Q6IE32 76 aa12.21□□□□□ -0.45
Trim71-201ENSMUST00000111816 2310034C09RikQ9D746 214 aa12.2□□□□□ -0.46
Trim71-201ENSMUST00000111816 Pkd1l1Q8R526 2615 aa12.19□□□□□ -0.46
Trim71-201ENSMUST00000111816 Utp20Q5XG71 2788 aaKnown RBP12.18□□□□□ -0.46
Trim71-201ENSMUST00000111816 1810062G17RikG3X8Y2 129 aa12.14□□□□□ -0.47
Trim71-201ENSMUST00000111816 A330070K13RikQ8CA53 115 aa12.14□□□□□ -0.47
Trim71-201ENSMUST00000111816 Sprr4Q8CGN8 76 aa12.13□□□□□ -0.47
Trim71-201ENSMUST00000111816 Gm9821Q8K076 103 aa12.1□□□□□ -0.47
Trim71-201ENSMUST00000111816 AY074887Q8R5F9 132 aa12.1□□□□□ -0.47
Trim71-201ENSMUST00000111816 AW011738F6S7Q2 159 aa12.1□□□□□ -0.47
Trim71-201ENSMUST00000111816 Gm10772F7AIG4 85 aa12.1□□□□□ -0.47
Trim71-201ENSMUST00000111816 Srsf12Q8C8K3 266 aa12.08□□□□□ -0.48
Trim71-201ENSMUST00000111816 C530025M09RikF6RGA8 229 aa12.08□□□□□ -0.48
Trim71-201ENSMUST00000111816 1700042G07RikB1AUF7 90 aa12.07□□□□□ -0.48
Trim71-201ENSMUST00000111816 Gm3646F6S692 53 aa12.07□□□□□ -0.48
Trim71-201ENSMUST00000111816 Smim29Q8R043 75 aa12.05□□□□□ -0.48
Trim71-201ENSMUST00000111816 NipblQ6KCD5 2798 aaKnown RBP12.03□□□□□ -0.48
Trim71-201ENSMUST00000111816 Itpr3P70227 2670 aa12.01□□□□□ -0.49
Trim71-201ENSMUST00000111816 Fam229bQ8CF36 80 aa12.01□□□□□ -0.49
Trim71-201ENSMUST00000111816 CenpfE9Q3P4 2997 aaKnown RBP12□□□□□ -0.49
Trim71-201ENSMUST00000111816 Krtap26-1Q9D7N2 215 aa11.97□□□□□ -0.49
Trim71-201ENSMUST00000111816 Sec61bQ9CQS8 96 aaKnown RBP11.96□□□□□ -0.49
Trim71-201ENSMUST00000111816 Itpr2Q9Z329 2701 aa11.94□□□□□ -0.5
Trim71-201ENSMUST00000111816 Col6a5A6H584 2640 aa11.94□□□□□ -0.5
Trim71-201ENSMUST00000111816 Sprr1bQ62267 153 aa11.94□□□□□ -0.5
Trim71-201ENSMUST00000111816 Krtap11-1E9Q2E9 183 aa11.91□□□□□ -0.5
Trim71-201ENSMUST00000111816 Romo1P60603 79 aa11.89□□□□□ -0.51
Trim71-201ENSMUST00000111816 6030445D17RikE9Q8F9 148 aa11.88□□□□□ -0.51
Trim71-201ENSMUST00000111816 Krtap24-1G3X9A2 248 aa11.87□□□□□ -0.51
Trim71-201ENSMUST00000111816 Gm4491E0CX42 125 aa11.85□□□□□ -0.51
Trim71-201ENSMUST00000111816 Defb9Q8R2I6 67 aa11.82□□□□□ -0.52
Trim71-201ENSMUST00000111816 ApcQ61315 2845 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 86.5 ms