RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Q9DAB9 146 aa12,87□□□□□ -0,35
Trim71-201ENSMUST00000111816 Defb1P56386 69 aa12,87□□□□□ -0,35
Trim71-201ENSMUST00000111816 AI854703Q8BIN3 203 aa12,87□□□□□ -0,35
Trim71-201ENSMUST00000111816 A930009A15RikG3UYI6 118 aa12,86□□□□□ -0,35
Trim71-201ENSMUST00000111816 Znf580Q9DB38 172 aa12,85□□□□□ -0,35
Trim71-201ENSMUST00000111816 Gm10770F7D043 238 aa12,83□□□□□ -0,36
Trim71-201ENSMUST00000111816 Gm3443F7CCV5 94 aa12,83□□□□□ -0,36
Trim71-201ENSMUST00000111816 9530053A07RikE9PVG8 2581 aa12,82□□□□□ -0,36
Trim71-201ENSMUST00000111816 Gm10642Q3TWM1 71 aa12,81□□□□□ -0,36
Trim71-201ENSMUST00000111816 Gm11213A0A1B0GR83 88 aa12,81□□□□□ -0,36
Trim71-201ENSMUST00000111816 Gm9903Q8C9Y8 129 aa12,81□□□□□ -0,36
Trim71-201ENSMUST00000111816 Gm44790A0A0N4SV91 103 aa12,8□□□□□ -0,36
Trim71-201ENSMUST00000111816 Gm9767G3X930 207 aa12,79□□□□□ -0,36
Trim71-201ENSMUST00000111816 Cypt15B1AXS0 87 aa12,78□□□□□ -0,36
Trim71-201ENSMUST00000111816 3110070M22RikQ9DAQ7 118 aa12,77□□□□□ -0,37
Trim71-201ENSMUST00000111816 Gm5464Q3UY29 175 aa12,77□□□□□ -0,37
Trim71-201ENSMUST00000111816 Gm27235Q3UW50 83 aa12,74□□□□□ -0,37
Trim71-201ENSMUST00000111816 Gpr15lA0A0B4J1N3 78 aa12,71□□□□□ -0,37
Trim71-201ENSMUST00000111816 Gm17689B3GLJ4 109 aa12,71□□□□□ -0,37
Trim71-201ENSMUST00000111816 Gm5617Q91VN2 117 aa12,7□□□□□ -0,38
Trim71-201ENSMUST00000111816 Gcn1E9PVA8 2671 aaKnown RBP12,69□□□□□ -0,38
Trim71-201ENSMUST00000111816 AtrQ9JKK8 2635 aa12,68□□□□□ -0,38
Trim71-201ENSMUST00000111816 Nsd1O88491 2588 aaKnown RBP12,65□□□□□ -0,38
Trim71-201ENSMUST00000111816 Gm10837Q3UTT8 145 aa12,65□□□□□ -0,38
Trim71-201ENSMUST00000111816 Defb10Q8R2I8 73 aa12,63□□□□□ -0,39
Trim71-201ENSMUST00000111816 Znf575Q3TXZ1 239 aa12,62□□□□□ -0,39
Trim71-201ENSMUST00000111816 Spaca4Q80ZQ0 127 aa12,62□□□□□ -0,39
Trim71-201ENSMUST00000111816 Pla2g2cP48076 150 aa12,61□□□□□ -0,39
Trim71-201ENSMUST00000111816 Map1aQ9QYR6 2776 aa12,59□□□□□ -0,39
Trim71-201ENSMUST00000111816 Gm16181B0V2H2 73 aa12,59□□□□□ -0,39
Trim71-201ENSMUST00000111816 Wisp2Q9Z0G4 251 aa12,58□□□□□ -0,4
Trim71-201ENSMUST00000111816 Rpl37aP61514 92 aa12,56□□□□□ -0,4
Trim71-201ENSMUST00000111816 Gm9573F7C950 1606 aa12,55□□□□□ -0,4
Trim71-201ENSMUST00000111816 Bri3P28662 125 aa12,54□□□□□ -0,4
Trim71-201ENSMUST00000111816 FlnaQ8BTM8 2647 aaKnown RBP12,54□□□□□ -0,4
Trim71-201ENSMUST00000111816 Psors1c2Q80ZC9 134 aa12,52□□□□□ -0,4
Trim71-201ENSMUST00000111816 FlnbQ80X90 2602 aaKnown RBP12,5□□□□□ -0,41
Trim71-201ENSMUST00000111816 Q8BT88 171 aa12,5□□□□□ -0,41
Trim71-201ENSMUST00000111816 Mast4Q811L6 2618 aa12,46□□□□□ -0,41
Trim71-201ENSMUST00000111816 MobpQ9D2P8 170 aa12,46□□□□□ -0,42
Trim71-201ENSMUST00000111816 Gm21798J3QNU5 87 aa12,45□□□□□ -0,42
Trim71-201ENSMUST00000111816 Phf5aP83870 110 aaKnown RBP12,44□□□□□ -0,42
Trim71-201ENSMUST00000111816 Lce6aD3YV94 81 aa12,42□□□□□ -0,42
Trim71-201ENSMUST00000111816 Prr9Q8BV84 116 aa12,41□□□□□ -0,42
Trim71-201ENSMUST00000111816 E130208F15RikQ3UPV3 143 aa12,41□□□□□ -0,42
Trim71-201ENSMUST00000111816 Defb11Q8R2I7 77 aa12,4□□□□□ -0,42
Trim71-201ENSMUST00000111816 Tep1P97499 2629 aa12,4□□□□□ -0,42
Trim71-201ENSMUST00000111816 Defb2P82020 71 aa12,39□□□□□ -0,43
Trim71-201ENSMUST00000111816 Gm9955Q8CEJ8 102 aa12,38□□□□□ -0,43
Trim71-201ENSMUST00000111816 Igsf10Q3V1M1 2594 aa12,38□□□□□ -0,43
Trim71-201ENSMUST00000111816 Golgb1E9PVZ8 3238 aa12,37□□□□□ -0,43
Trim71-201ENSMUST00000111816 Camk2n1Q6QWF9 78 aa12,37□□□□□ -0,43
Trim71-201ENSMUST00000111816 Lypd5Q9D7Z7 256 aa12,36□□□□□ -0,43
Trim71-201ENSMUST00000111816 Cypt14J3QPF7 87 aa12,36□□□□□ -0,43
Trim71-201ENSMUST00000111816 Chtf8P0CG14 533 aa12,35□□□□□ -0,43
Trim71-201ENSMUST00000111816 Zfp292Q9Z2U2 2698 aa12,33□□□□□ -0,44
Trim71-201ENSMUST00000111816 Chd6A3KFM7 2711 aa12,3□□□□□ -0,44
Trim71-201ENSMUST00000111816 Gm3880A0A1B0GSB3 72 aa12,3□□□□□ -0,44
Trim71-201ENSMUST00000111816 Col4a2P08122 1707 aa12,3□□□□□ -0,44
Trim71-201ENSMUST00000111816 Snhg11Q4G0K9 87 aa12,29□□□□□ -0,44
Trim71-201ENSMUST00000111816 Gm7276Q3TYW4 209 aa12,29□□□□□ -0,44
Trim71-201ENSMUST00000111816 CnbpP53996 178 aaKnown RBP12,28□□□□□ -0,44
Trim71-201ENSMUST00000111816 Stab2Q8R4U0 2559 aa12,28□□□□□ -0,44
Trim71-201ENSMUST00000111816 Jbts17Q8CE72 3214 aa12,28□□□□□ -0,44
Trim71-201ENSMUST00000111816 Spata3Q9D9T6 193 aa12,27□□□□□ -0,45
Trim71-201ENSMUST00000111816 Gm9195A0A140LHT4 2805 aa12,24□□□□□ -0,45
Trim71-201ENSMUST00000111816 Gm26620Q9CY65 116 aa12,22□□□□□ -0,45
Trim71-201ENSMUST00000111816 Fam168bQ80XQ8 194 aa12,22□□□□□ -0,45
Trim71-201ENSMUST00000111816 Spink7Q6IE32 76 aa12,21□□□□□ -0,45
Trim71-201ENSMUST00000111816 2310034C09RikQ9D746 214 aa12,2□□□□□ -0,46
Trim71-201ENSMUST00000111816 Pkd1l1Q8R526 2615 aa12,19□□□□□ -0,46
Trim71-201ENSMUST00000111816 Utp20Q5XG71 2788 aaKnown RBP12,18□□□□□ -0,46
Trim71-201ENSMUST00000111816 1810062G17RikG3X8Y2 129 aa12,14□□□□□ -0,47
Trim71-201ENSMUST00000111816 A330070K13RikQ8CA53 115 aa12,14□□□□□ -0,47
Trim71-201ENSMUST00000111816 Sprr4Q8CGN8 76 aa12,13□□□□□ -0,47
Trim71-201ENSMUST00000111816 Gm9821Q8K076 103 aa12,1□□□□□ -0,47
Trim71-201ENSMUST00000111816 AY074887Q8R5F9 132 aa12,1□□□□□ -0,47
Trim71-201ENSMUST00000111816 AW011738F6S7Q2 159 aa12,1□□□□□ -0,47
Trim71-201ENSMUST00000111816 Gm10772F7AIG4 85 aa12,1□□□□□ -0,47
Trim71-201ENSMUST00000111816 Srsf12Q8C8K3 266 aa12,08□□□□□ -0,48
Trim71-201ENSMUST00000111816 C530025M09RikF6RGA8 229 aa12,08□□□□□ -0,48
Trim71-201ENSMUST00000111816 1700042G07RikB1AUF7 90 aa12,07□□□□□ -0,48
Trim71-201ENSMUST00000111816 Gm3646F6S692 53 aa12,07□□□□□ -0,48
Trim71-201ENSMUST00000111816 Smim29Q8R043 75 aa12,05□□□□□ -0,48
Trim71-201ENSMUST00000111816 NipblQ6KCD5 2798 aaKnown RBP12,03□□□□□ -0,48
Trim71-201ENSMUST00000111816 Itpr3P70227 2670 aa12,01□□□□□ -0,49
Trim71-201ENSMUST00000111816 Fam229bQ8CF36 80 aa12,01□□□□□ -0,49
Trim71-201ENSMUST00000111816 CenpfE9Q3P4 2997 aaKnown RBP12□□□□□ -0,49
Trim71-201ENSMUST00000111816 Krtap26-1Q9D7N2 215 aa11,97□□□□□ -0,49
Trim71-201ENSMUST00000111816 Sec61bQ9CQS8 96 aaKnown RBP11,96□□□□□ -0,49
Trim71-201ENSMUST00000111816 Itpr2Q9Z329 2701 aa11,94□□□□□ -0,5
Trim71-201ENSMUST00000111816 Col6a5A6H584 2640 aa11,94□□□□□ -0,5
Trim71-201ENSMUST00000111816 Sprr1bQ62267 153 aa11,94□□□□□ -0,5
Trim71-201ENSMUST00000111816 Krtap11-1E9Q2E9 183 aa11,91□□□□□ -0,5
Trim71-201ENSMUST00000111816 Romo1P60603 79 aa11,89□□□□□ -0,51
Trim71-201ENSMUST00000111816 6030445D17RikE9Q8F9 148 aa11,88□□□□□ -0,51
Trim71-201ENSMUST00000111816 Krtap24-1G3X9A2 248 aa11,87□□□□□ -0,51
Trim71-201ENSMUST00000111816 Gm4491E0CX42 125 aa11,85□□□□□ -0,51
Trim71-201ENSMUST00000111816 Defb9Q8R2I6 67 aa11,82□□□□□ -0,52
Trim71-201ENSMUST00000111816 ApcQ61315 2845 aa11,82□□□□□ -0,52
Retrieved 100 of 22,080 RNA–protein pairs in 11,3 ms