RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Ly6c2P0CW03 131 aa5.14□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Setd2E9Q5F9 2537 aa5.14□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Chchd7Q8K2Q5 85 aa5.13□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Igkv1-88A0A140T8N1 120 aa5.13□□□□□ -1.59
Bdnf-209ENSMUST00000111050 A0A286YCN5 57 aa5.13□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Ube2bP63147 152 aa5.13□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Gm16181B0V2H2 73 aa5.13□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Coa5Q99M07 74 aa5.13□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Pla2g1bQ9Z0Y2 146 aa5.13□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Sprr1bQ62267 153 aa5.12□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Igkv3-9A0A140T8P4 119 aa5.12□□□□□ -1.59
Bdnf-209ENSMUST00000111050 C130032M10RikQ8C888 123 aa5.1□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Ube2aQ9Z255 152 aa5.1□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Igkv3-1A0A075B5P1 119 aa5.1□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Sprr2jO70561 109 aa5.1□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Gm17509Q9CZ61 145 aa5.1□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Akap13E9Q394 2776 aa5.1□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Lce6aD3YV94 81 aa5.09□□□□□ -1.59
Bdnf-209ENSMUST00000111050 AY074887Q8R5F9 132 aa5.09□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Defb40Q70KL2 73 aa5.09□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Ndufs5Q99LY9 106 aa5.09□□□□□ -1.59
Bdnf-209ENSMUST00000111050 Igkv8-19A0A0G2JFN8 121 aa5.09□□□□□ -1.6
Bdnf-209ENSMUST00000111050 A030003K21RikA0A1Y7VIM3 128 aa5.09□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Gm6217A0A1Y7VJK9 128 aa5.09□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Utp20Q5XG71 2788 aaKnown RBP5.09□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Nf1Q04690 2841 aa5.08□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Gm43218A0A0G2JGT0 114 aa5.08□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Gm17577J3QNF7 156 aa5.07□□□□□ -1.6
Bdnf-209ENSMUST00000111050 PrcdQ00LT2 53 aa5.07□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Mapk1ip1lQ8BH93 242 aa5.07□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Bahcc1Q3UHR0 2643 aa5.07□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Gm10160F6Y577 67 aa5.07□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Elof1P60003 83 aa5.07□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Ptpn13Q64512 2453 aa5.06□□□□□ -1.6
Bdnf-209ENSMUST00000111050 FlncQ8VHX6 2726 aaKnown RBP5.06□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Nbeal1E9PYP2 2688 aa5.06□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Krtap11-1E9Q2E9 183 aa5.06□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Gm10837Q3UTT8 145 aa5.06□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Leap2Q91V13 76 aa5.06□□□□□ -1.6
Bdnf-209ENSMUST00000111050 1700042G07RikB1AUF7 90 aa5.06□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Vpreb3D3Z6J4 130 aa5.06□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Zfp462B1AWL2 2495 aaKnown RBP5.06□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Gm8439G3UWA7 96 aa5.05□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Pkd1l2Q7TN88 2461 aa5.05□□□□□ -1.6
Bdnf-209ENSMUST00000111050 OtogO55225 2910 aa5.05□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Igkv4-92A0A0B4J1I2 117 aa5.05□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Mrpl34Q99N91 92 aa5.05□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Xirp2Q4U4S6 3784 aa5.05□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Phxr4P15974 95 aa5.05□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Gm44790A0A0N4SV91 103 aa5.04□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Gm17521F6QAC8 156 aa5.04□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Smim29Q8R043 75 aa5.04□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Igkv3-3A0A140T8Q0 119 aa5.04□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Rnase1P00683 149 aa5.04□□□□□ -1.6
Bdnf-209ENSMUST00000111050 PolqQ8CGS6 2544 aa5.04□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Itpr3P70227 2670 aa5.03□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Gm9913Q8BQQ2 135 aa5.03□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Tcl1b5P56845 121 aa5.03□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Srsf12Q8C8K3 266 aa5.03□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Gm26620Q9CY65 116 aa5.03□□□□□ -1.6
Bdnf-209ENSMUST00000111050 Cox6a2P43023 97 aa5.02□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Ndufb1P0DN34 57 aa5.02□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Abca12E9Q876 2595 aa5.02□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Gm12353A2AGJ4 60 aa5.01□□□□□ -1.61
Bdnf-209ENSMUST00000111050 U90926O08546 118 aa5.01□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Camk2n2Q78WH7 79 aa5.01□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Cox7b2Q9D2H1 82 aa5.01□□□□□ -1.61
Bdnf-209ENSMUST00000111050 A0A286YE49 62 aa5.01□□□□□ -1.61
Bdnf-209ENSMUST00000111050 OxtP35454 125 aa5.01□□□□□ -1.61
Bdnf-209ENSMUST00000111050 1700074P13RikQ9D9G7 251 aa5□□□□□ -1.61
Bdnf-209ENSMUST00000111050 A730009L09RikA0A1B0GS82 72 aa5□□□□□ -1.61
Bdnf-209ENSMUST00000111050 A0A286YCP9 139 aa5□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Pla2g2cP48076 150 aa5□□□□□ -1.61
Bdnf-209ENSMUST00000111050 B9d2Q3UK10 175 aa5□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Gm3646F6S692 53 aa4.99□□□□□ -1.61
Bdnf-209ENSMUST00000111050 MtorQ9JLN9 2549 aa4.99□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Igkv3-4A0A140T8Q4 119 aa4.98□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Itpr1P11881 2749 aa4.98□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Gm10643Q3URG9 111 aa4.98□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Cmc4Q61908 68 aa4.97□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Wfdc11A2A5H7 82 aa4.97□□□□□ -1.61
Bdnf-209ENSMUST00000111050 NipblQ6KCD5 2798 aaKnown RBP4.97□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Piezo1E2JF22 2547 aa4.97□□□□□ -1.61
Bdnf-209ENSMUST00000111050 CubnQ9JLB4 3623 aa4.97□□□□□ -1.61
Bdnf-209ENSMUST00000111050 Gm11939A2A592 99 aa4.96□□□□□ -1.62
Bdnf-209ENSMUST00000111050 PscaP57096 123 aa4.96□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Wfdc13Q5DQQ6 81 aa4.96□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Reg3aO09037 175 aa4.96□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Gm7276Q3TYW4 209 aa4.96□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Defb38Q7TNV7 63 aa4.96□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Psors1c2Q80ZC9 134 aa4.96□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Gm10267M0QWD8 85 aa4.95□□□□□ -1.62
Bdnf-209ENSMUST00000111050 HrnrQ8VHD8 2496 aa4.94□□□□□ -1.62
Bdnf-209ENSMUST00000111050 1700018G05RikA0A1B0GSI2 66 aa4.94□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Gm21886J3QJU9 214 aa4.94□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Chtf8P0CG14 533 aa4.94□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Rpl37aP61514 92 aa4.93□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Zcchc13Q9D548 170 aa4.92□□□□□ -1.62
Bdnf-209ENSMUST00000111050 Epg5Q80TA9 2572 aa4.92□□□□□ -1.62
Bdnf-209ENSMUST00000111050 PtprqP0C5E4 2300 aa4.92□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms