RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Gm11627A6PWP4 55 aa9.68□□□□□ -0.86
Trim11-203ENSMUST00000108810 Igkv2-109A0A075B5K6 120 aa9.67□□□□□ -0.86
Trim11-203ENSMUST00000108810 Fras1Q80T14 4010 aa9.67□□□□□ -0.86
Trim11-203ENSMUST00000108810 Xcl1P47993 114 aa9.67□□□□□ -0.86
Trim11-203ENSMUST00000108810 4930519P11RikQ9CUJ8 166 aa9.67□□□□□ -0.86
Trim11-203ENSMUST00000108810 Q9DAA7 145 aa9.67□□□□□ -0.86
Trim11-203ENSMUST00000108810 Msrb1Q9JLC3 116 aa9.67□□□□□ -0.86
Trim11-203ENSMUST00000108810 Cd164Q9R0L9 197 aa9.67□□□□□ -0.86
Trim11-203ENSMUST00000108810 PrkdcP97313 4128 aa9.66□□□□□ -0.86
Trim11-203ENSMUST00000108810 Defa1P11477 93 aa9.66□□□□□ -0.86
Trim11-203ENSMUST00000108810 Cdk2ap2Q9CPY4 127 aa9.66□□□□□ -0.86
Trim11-203ENSMUST00000108810 Elof1P60003 83 aa9.65□□□□□ -0.86
Trim11-203ENSMUST00000108810 Smim29Q8R043 75 aa9.65□□□□□ -0.86
Trim11-203ENSMUST00000108810 E130218I03RikA0A0U1RNU5 63 aa9.65□□□□□ -0.87
Trim11-203ENSMUST00000108810 BC048502Q80Y74 154 aa9.65□□□□□ -0.87
Trim11-203ENSMUST00000108810 Gm7102J3QQ10 178 aa9.64□□□□□ -0.87
Trim11-203ENSMUST00000108810 BaalcQ8VHV1 145 aa9.64□□□□□ -0.87
Trim11-203ENSMUST00000108810 Gm7276Q3TYW4 209 aa9.64□□□□□ -0.87
Trim11-203ENSMUST00000108810 Pkd1l1Q8R526 2615 aa9.63□□□□□ -0.87
Trim11-203ENSMUST00000108810 Pou2af1Q64693 256 aa9.63□□□□□ -0.87
Trim11-203ENSMUST00000108810 Ighv10-3A0A075B5T6 119 aa9.62□□□□□ -0.87
Trim11-203ENSMUST00000108810 Gm10735Q3US96 136 aa9.62□□□□□ -0.87
Trim11-203ENSMUST00000108810 Wfdc6bF6ULY1 148 aa9.61□□□□□ -0.87
Trim11-203ENSMUST00000108810 Fam168bQ80XQ8 194 aa9.61□□□□□ -0.87
Trim11-203ENSMUST00000108810 Anapc13Q8R034 74 aa9.61□□□□□ -0.87
Trim11-203ENSMUST00000108810 Dnah11E9Q7N9 4488 aa9.6□□□□□ -0.87
Trim11-203ENSMUST00000108810 Gm10251J3QPM5 127 aa9.6□□□□□ -0.87
Trim11-203ENSMUST00000108810 P84750 121 aa9.6□□□□□ -0.87
Trim11-203ENSMUST00000108810 Igkv8-26A0A075B5N5 123 aa9.6□□□□□ -0.87
Trim11-203ENSMUST00000108810 Tmem213Q08EA8 116 aa9.6□□□□□ -0.87
Trim11-203ENSMUST00000108810 Defb40Q70KL2 73 aa9.6□□□□□ -0.87
Trim11-203ENSMUST00000108810 MrapQ9D159 127 aa9.6□□□□□ -0.87
Trim11-203ENSMUST00000108810 TgO08710 2766 aa9.59□□□□□ -0.87
Trim11-203ENSMUST00000108810 Igkv8-27A0A0G2JF28 120 aa9.59□□□□□ -0.87
Trim11-203ENSMUST00000108810 Igkv8-30A0A140T8M3 121 aa9.59□□□□□ -0.87
Trim11-203ENSMUST00000108810 PlecQ9QXS1 4691 aaKnown RBP9.58□□□□□ -0.88
Trim11-203ENSMUST00000108810 Prol1E9PYQ4 312 aa9.58□□□□□ -0.88
Trim11-203ENSMUST00000108810 Dmac1Q9CQ00 111 aa9.57□□□□□ -0.88
Trim11-203ENSMUST00000108810 FcgbpE9Q0B5 2583 aa9.57□□□□□ -0.88
Trim11-203ENSMUST00000108810 9530003J23RikQ8BM26 151 aa9.55□□□□□ -0.88
Trim11-203ENSMUST00000108810 Defb37Q7TMD2 62 aa9.55□□□□□ -0.88
Trim11-203ENSMUST00000108810 Obox2E9PXV9 151 aa9.54□□□□□ -0.88
Trim11-203ENSMUST00000108810 Defa4P28311 92 aa9.54□□□□□ -0.88
Trim11-203ENSMUST00000108810 Gm9918Q8BUR5 174 aa9.54□□□□□ -0.88
Trim11-203ENSMUST00000108810 Dnah9B1AR51 4484 aa9.53□□□□□ -0.88
Trim11-203ENSMUST00000108810 Atp5eP56382 52 aa9.53□□□□□ -0.88
Trim11-203ENSMUST00000108810 Prr13Q9CQJ5 137 aa9.53□□□□□ -0.88
Trim11-203ENSMUST00000108810 Igkv3-2A0A075B5P0 119 aa9.53□□□□□ -0.88
Trim11-203ENSMUST00000108810 Defb11Q8R2I7 77 aa9.53□□□□□ -0.88
Trim11-203ENSMUST00000108810 Fam19a5Q91WE9 132 aa9.52□□□□□ -0.89
Trim11-203ENSMUST00000108810 Gm9507D3Z5T3 223 aa9.51□□□□□ -0.89
Trim11-203ENSMUST00000108810 Lamtor3O88653 124 aa9.51□□□□□ -0.89
Trim11-203ENSMUST00000108810 Gm10837Q3UTT8 145 aa9.51□□□□□ -0.89
Trim11-203ENSMUST00000108810 Fam19a1Q7TPG8 133 aa9.5□□□□□ -0.89
Trim11-203ENSMUST00000108810 A730071L15RikQ8C4X0 137 aa9.5□□□□□ -0.89
Trim11-203ENSMUST00000108810 Ntn5Q3UQ22 452 aa9.49□□□□□ -0.89
Trim11-203ENSMUST00000108810 Igkv1-122A0A140T8M9 119 aa9.48□□□□□ -0.89
Trim11-203ENSMUST00000108810 Zcchc13Q9D548 170 aa9.48□□□□□ -0.89
Trim11-203ENSMUST00000108810 SycnQ8VCK7 134 aa9.47□□□□□ -0.89
Trim11-203ENSMUST00000108810 Igkv8-21A0A140T8P7 120 aa9.47□□□□□ -0.89
Trim11-203ENSMUST00000108810 Gm11011D3Z3L9 86 aa9.47□□□□□ -0.89
Trim11-203ENSMUST00000108810 Vpreb2P13373 142 aa9.47□□□□□ -0.89
Trim11-203ENSMUST00000108810 Ormdl1Q921I0 153 aa9.47□□□□□ -0.89
Trim11-203ENSMUST00000108810 Ighv2-5A0A0A6YY69 116 aa9.46□□□□□ -0.9
Trim11-203ENSMUST00000108810 Nupr2Q497P3 102 aa9.46□□□□□ -0.9
Trim11-203ENSMUST00000108810 Gm10308Q9CVR5 141 aa9.45□□□□□ -0.9
Trim11-203ENSMUST00000108810 A930002H24RikQ8C8Y3 163 aa9.45□□□□□ -0.9
Trim11-203ENSMUST00000108810 Inafm2A0A1L1STD6 152 aa9.44□□□□□ -0.9
Trim11-203ENSMUST00000108810 Tmem243B2RVB9 118 aa9.44□□□□□ -0.9
Trim11-203ENSMUST00000108810 Fam104aA2A6P4 185 aa9.44□□□□□ -0.9
Trim11-203ENSMUST00000108810 Defa23Q5G866 93 aa9.44□□□□□ -0.9
Trim11-203ENSMUST00000108810 U90926O08546 118 aa9.43□□□□□ -0.9
Trim11-203ENSMUST00000108810 Igkv8-28A0A0G2JE47 121 aa9.43□□□□□ -0.9
Trim11-203ENSMUST00000108810 Rbm3O89086 153 aaKnown RBP9.43□□□□□ -0.9
Trim11-203ENSMUST00000108810 4930535I16RikQ9CUI2 172 aa9.42□□□□□ -0.9
Trim11-203ENSMUST00000108810 Defa27F2Z403 93 aa9.42□□□□□ -0.9
Trim11-203ENSMUST00000108810 Pde6gP09174 87 aa9.41□□□□□ -0.9
Trim11-203ENSMUST00000108810 FasnP19096 2504 aaKnown RBP9.4□□□□□ -0.9
Trim11-203ENSMUST00000108810 Plac8Q9JI48 112 aa9.4□□□□□ -0.9
Trim11-203ENSMUST00000108810 A0A286YE02 88 aa9.39□□□□□ -0.91
Trim11-203ENSMUST00000108810 SvipQ3UZP4 77 aa9.39□□□□□ -0.91
Trim11-203ENSMUST00000108810 A830005F24RikQ8BRT5 167 aa9.39□□□□□ -0.91
Trim11-203ENSMUST00000108810 Tmem254aP0DN89 123 aa9.38□□□□□ -0.91
Trim11-203ENSMUST00000108810 Tmem254bP0DN90 123 aa9.38□□□□□ -0.91
Trim11-203ENSMUST00000108810 Tmem254cP0DN91 123 aa9.38□□□□□ -0.91
Trim11-203ENSMUST00000108810 Dnah7aE9Q0T8 4024 aa9.37□□□□□ -0.91
Trim11-203ENSMUST00000108810 Ighv2-2A0A075B5P8 116 aa9.37□□□□□ -0.91
Trim11-203ENSMUST00000108810 P01821 116 aa9.37□□□□□ -0.91
Trim11-203ENSMUST00000108810 Vpreb1P13372 142 aa9.37□□□□□ -0.91
Trim11-203ENSMUST00000108810 Igf1P05017 153 aa9.37□□□□□ -0.91
Trim11-203ENSMUST00000108810 Hist1h4aP62806 103 aaKnown RBP9.37□□□□□ -0.91
Trim11-203ENSMUST00000108810 Dnah7cA0A087WR13 4024 aa9.36□□□□□ -0.91
Trim11-203ENSMUST00000108810 Ubl5Q9EPV8 73 aa9.36□□□□□ -0.91
Trim11-203ENSMUST00000108810 Vpreb3D3Z6J4 130 aa9.35□□□□□ -0.91
Trim11-203ENSMUST00000108810 2310050C09RikG5E8Z3 280 aa9.35□□□□□ -0.91
Trim11-203ENSMUST00000108810 1700012A03RikQ9DAF1 130 aa9.35□□□□□ -0.91
Trim11-203ENSMUST00000108810 P06320 134 aa9.34□□□□□ -0.91
Trim11-203ENSMUST00000108810 PscaP57096 123 aa9.34□□□□□ -0.91
Trim11-203ENSMUST00000108810 Phf5aP83870 110 aaKnown RBP9.34□□□□□ -0.91
Trim11-203ENSMUST00000108810 Gm28539A0A087WSL9 92 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms