RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Prune2Q52KR3 3084 aa6.36□□□□□ -1.39
Prpf40a-201ENSMUST00000076313 Phf5aP83870 110 aaKnown RBP6.36□□□□□ -1.39
Prpf40a-201ENSMUST00000076313 Krtap26-1Q9D7N2 215 aa6.35□□□□□ -1.39
Prpf40a-201ENSMUST00000076313 Gm20661K7N787 53 aa6.35□□□□□ -1.39
Prpf40a-201ENSMUST00000076313 Gm26661M0QWV4 156 aa6.35□□□□□ -1.39
Prpf40a-201ENSMUST00000076313 AI606181Q8C7B9 129 aa6.35□□□□□ -1.39
Prpf40a-201ENSMUST00000076313 Gm17606F6ZL36 78 aa6.35□□□□□ -1.39
Prpf40a-201ENSMUST00000076313 A930002H24RikQ8C8Y3 163 aa6.34□□□□□ -1.39
Prpf40a-201ENSMUST00000076313 Krtap24-1G3X9A2 248 aa6.34□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Zfp292Q9Z2U2 2698 aa6.34□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Gm12216A0A1W2P827 62 aa6.32□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Defb1P56386 69 aa6.32□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 CenpfE9Q3P4 2997 aaKnown RBP6.32□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Limd2Q8BGB5 128 aa6.32□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Fam168bQ80XQ8 194 aa6.31□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Unc79Q0KK59 2596 aa6.31□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Coa5Q99M07 74 aa6.31□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Q8BT88 171 aa6.31□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Krtap11-1E9Q2E9 183 aa6.3□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Gm5617Q91VN2 117 aa6.29□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Psors1c2Q80ZC9 134 aa6.29□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Znf414Q9DCK4 299 aa6.29□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Myo18bE9PV66 2605 aa6.29□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Prol1E9PYQ4 312 aa6.28□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Nbeal1E9PYP2 2688 aa6.28□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Spaca4Q80ZQ0 127 aa6.28□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Cdc42se1Q8BHL7 80 aa6.28□□□□□ -1.4
Prpf40a-201ENSMUST00000076313 Usp34Q6ZQ93 3582 aa6.27□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 Gpr15lA0A0B4J1N3 78 aa6.27□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 Lama2Q60675 3118 aaKnown RBP6.26□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 Gm10837Q3UTT8 145 aa6.26□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 CicQ924A2 2510 aa6.26□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 1810062G17RikG3X8Y2 129 aa6.25□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 Dmbt1Q60997 2085 aa6.24□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 4930507D05RikQ8C9C9 103 aa6.24□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 Usp9yF8VPU6 2556 aa6.24□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 AY074887Q8R5F9 132 aa6.24□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 AplnQ9R0R4 77 aa6.24□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 Gm3233E9Q2H5 230 aa6.24□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 Gm27235Q3UW50 83 aa6.23□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 Q8BGJ3 129 aa6.23□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 Sprr4Q8CGN8 76 aa6.23□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 A330070K13RikQ8CA53 115 aa6.22□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 Ankrd17Q99NH0 2603 aaKnown RBP6.22□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 Mki67E9PVX6 3177 aaKnown RBP6.21□□□□□ -1.41
Prpf40a-201ENSMUST00000076313 C530025M09RikF6RGA8 229 aa6.2□□□□□ -1.42
Prpf40a-201ENSMUST00000076313 Phxr5P08399 672 aa6.2□□□□□ -1.42
Prpf40a-201ENSMUST00000076313 Phxr4P15974 95 aa6.2□□□□□ -1.42
Prpf40a-201ENSMUST00000076313 Defb11Q8R2I7 77 aa6.19□□□□□ -1.42
Prpf40a-201ENSMUST00000076313 Gm7173A0A0G2JEB6 3132 aa6.18□□□□□ -1.42
Prpf40a-201ENSMUST00000076313 Sprr1bQ62267 153 aa6.17□□□□□ -1.42
Prpf40a-201ENSMUST00000076313 Lypd5Q9D7Z7 256 aa6.17□□□□□ -1.42
Prpf40a-201ENSMUST00000076313 RetnlbQ99P86 105 aa6.16□□□□□ -1.42
Prpf40a-201ENSMUST00000076313 Col12a1Q60847 3120 aa6.16□□□□□ -1.42
Prpf40a-201ENSMUST00000076313 Fam229bQ8CF36 80 aa6.16□□□□□ -1.42
Prpf40a-201ENSMUST00000076313 Prrc2cQ3TLH4 2846 aaKnown RBP6.16□□□□□ -1.42
Prpf40a-201ENSMUST00000076313 Mp68P56379 58 aa6.14□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 Gm7276Q3TYW4 209 aa6.14□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 FlnbQ80X90 2602 aaKnown RBP6.14□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 Bod1lE9Q6J5 3032 aa6.12□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 Uqcr11Q9CPX8 56 aa6.11□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 Gm11213A0A1B0GR83 88 aa6.11□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 Spata3Q9D9T6 193 aa6.1□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 Usp24B1AY13 2617 aaKnown RBP6.1□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 Chtf8P0CG14 533 aa6.1□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 CnbpP53996 178 aaKnown RBP6.09□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 Defb9Q8R2I6 67 aa6.09□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 HttP42859 3119 aa6.09□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 Anapc11Q9CPX9 84 aa6.09□□□□□ -1.43
Prpf40a-201ENSMUST00000076313 Ankrd11E9Q4F7 2643 aa6.09□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 HrnrQ8VHD8 2496 aa6.08□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 AtrQ9JKK8 2635 aa6.07□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 Gm10643Q3URG9 111 aa6.07□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 Lelp1Q9DAE3 120 aa6.07□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 Cypt15B1AXS0 87 aa6.06□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 Gm7138L7N2C3 230 aa6.05□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 Gm3238W4VSP7 230 aa6.05□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 Cdh23Q99PF4 3354 aa6.05□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 Gcn1E9PVA8 2671 aaKnown RBP6.05□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 Nsd1O88491 2588 aaKnown RBP6.04□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 Gm7137J3QMW1 236 aa6.03□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 Rnase13Q5GAM7 153 aa6.03□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 Smim29Q8R043 75 aa6.03□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 FasnP19096 2504 aaKnown RBP6.03□□□□□ -1.44
Prpf40a-201ENSMUST00000076313 Ranbp2Q9ERU9 3053 aaKnown RBP6.02□□□□□ -1.45
Prpf40a-201ENSMUST00000076313 Plac8Q9JI48 112 aa6.01□□□□□ -1.45
Prpf40a-201ENSMUST00000076313 Rev3lQ61493 3122 aa6.01□□□□□ -1.45
Prpf40a-201ENSMUST00000076313 Fam104aA2A6P4 185 aa6□□□□□ -1.45
Prpf40a-201ENSMUST00000076313 FlnaQ8BTM8 2647 aaKnown RBP6□□□□□ -1.45
Prpf40a-201ENSMUST00000076313 Kmt2bO08550 2713 aa5.98□□□□□ -1.45
Prpf40a-201ENSMUST00000076313 2310034C09RikQ9D746 214 aa5.97□□□□□ -1.45
Prpf40a-201ENSMUST00000076313 Cfap54Q8C6S9 3106 aa5.97□□□□□ -1.45
Prpf40a-201ENSMUST00000076313 Gm10320E9PW43 113 aa5.97□□□□□ -1.45
Prpf40a-201ENSMUST00000076313 Hectd1Q69ZR2 2618 aaKnown RBP5.97□□□□□ -1.45
Prpf40a-201ENSMUST00000076313 Chd7A2AJK6 2986 aaKnown RBP5.97□□□□□ -1.45
Prpf40a-201ENSMUST00000076313 AW011738F6S7Q2 159 aa5.96□□□□□ -1.45
Prpf40a-201ENSMUST00000076313 Map1aQ9QYR6 2776 aa5.96□□□□□ -1.46
Prpf40a-201ENSMUST00000076313 Gm21798J3QNU5 87 aa5.96□□□□□ -1.46
Prpf40a-201ENSMUST00000076313 Vps13aQ5H8C4 3166 aa5.95□□□□□ -1.46
Prpf40a-201ENSMUST00000076313 Gm9195A0A140LHT4 2805 aa5.95□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 157.5 ms