RNA–Protein interactions for RNA: ENSMUST00000038421.7

Lsm1-201, Transcript of U6 snRNA-associated Sm-like protein LSm1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm1, Length 2,663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1-201ENSMUST00000038421 Erdr1J3QMM0 206 aa11.19□□□□□ -0.62
Lsm1-201ENSMUST00000038421 Smlr1J3QMJ4 66 aa11.19□□□□□ -0.62
Lsm1-201ENSMUST00000038421 Brk1Q91VR8 75 aa11.19□□□□□ -0.62
Lsm1-201ENSMUST00000038421 A730009L09RikA0A1B0GS82 72 aa11.18□□□□□ -0.62
Lsm1-201ENSMUST00000038421 Gm17577J3QNF7 156 aa11.18□□□□□ -0.62
Lsm1-201ENSMUST00000038421 Gm17509Q9CZ61 145 aa11.18□□□□□ -0.62
Lsm1-201ENSMUST00000038421 Ighv8-13A0A075B5Y0 101 aa11.17□□□□□ -0.62
Lsm1-201ENSMUST00000038421 Cd164Q9R0L9 197 aa11.17□□□□□ -0.62
Lsm1-201ENSMUST00000038421 Fam19a5Q91WE9 132 aa11.16□□□□□ -0.62
Lsm1-201ENSMUST00000038421 SnurfQ9WU12 71 aa11.16□□□□□ -0.62
Lsm1-201ENSMUST00000038421 Cox7b2Q9D2H1 82 aa11.15□□□□□ -0.62
Lsm1-201ENSMUST00000038421 Pde6gP09174 87 aa11.15□□□□□ -0.62
Lsm1-201ENSMUST00000038421 Igkv8-28A0A0G2JE47 121 aa11.14□□□□□ -0.63
Lsm1-201ENSMUST00000038421 9430015G10RikA2ASP7 199 aa11.14□□□□□ -0.63
Lsm1-201ENSMUST00000038421 Elof1P60003 83 aa11.14□□□□□ -0.63
Lsm1-201ENSMUST00000038421 Igkv4-92A0A0B4J1I2 117 aa11.14□□□□□ -0.63
Lsm1-201ENSMUST00000038421 Ndufc1Q9CQY9 76 aa11.14□□□□□ -0.63
Lsm1-201ENSMUST00000038421 ApcQ61315 2845 aa11.14□□□□□ -0.63
Lsm1-201ENSMUST00000038421 Snhg11Q4G0K9 87 aa11.13□□□□□ -0.63
Lsm1-201ENSMUST00000038421 Cdk2ap2Q9CPY4 127 aa11.12□□□□□ -0.63
Lsm1-201ENSMUST00000038421 Igkv1-122A0A140T8M9 119 aa11.11□□□□□ -0.63
Lsm1-201ENSMUST00000038421 BC048502Q80Y74 154 aa11.11□□□□□ -0.63
Lsm1-201ENSMUST00000038421 Ighv2-2A0A075B5P8 116 aa11.11□□□□□ -0.63
Lsm1-201ENSMUST00000038421 P01821 116 aa11.11□□□□□ -0.63
Lsm1-201ENSMUST00000038421 PolqQ8CGS6 2544 aa11.09□□□□□ -0.63
Lsm1-201ENSMUST00000038421 Camk2n2Q78WH7 79 aa11.09□□□□□ -0.63
Lsm1-201ENSMUST00000038421 Reg3bP35230 175 aa11.09□□□□□ -0.63
Lsm1-201ENSMUST00000038421 Tenm4Q3UHK6 2771 aa11.08□□□□□ -0.64
Lsm1-201ENSMUST00000038421 Smim29Q8R043 75 aa11.08□□□□□ -0.64
Lsm1-201ENSMUST00000038421 Tenm1Q9WTS4 2731 aa11.08□□□□□ -0.64
Lsm1-201ENSMUST00000038421 CicQ924A2 2510 aa11.08□□□□□ -0.64
Lsm1-201ENSMUST00000038421 Fbn1Q61554 2873 aaKnown RBP11.06□□□□□ -0.64
Lsm1-201ENSMUST00000038421 Defa27F2Z403 93 aa11.06□□□□□ -0.64
Lsm1-201ENSMUST00000038421 A330070K13RikQ8CA53 115 aa11.06□□□□□ -0.64
Lsm1-201ENSMUST00000038421 Vpreb2P13373 142 aa11.05□□□□□ -0.64
Lsm1-201ENSMUST00000038421 Trav14-1A0A0G2JF94 121 aa11.04□□□□□ -0.64
Lsm1-201ENSMUST00000038421 H2al1aQ5M8Q2 105 aa11.04□□□□□ -0.64
Lsm1-201ENSMUST00000038421 Sprr4Q8CGN8 76 aa11.04□□□□□ -0.64
Lsm1-201ENSMUST00000038421 A0A286YE02 88 aa11.03□□□□□ -0.64
Lsm1-201ENSMUST00000038421 Pou2af1Q64693 256 aa11.03□□□□□ -0.64
Lsm1-201ENSMUST00000038421 PtprqP0C5E4 2300 aa11.01□□□□□ -0.65
Lsm1-201ENSMUST00000038421 Igkv3-2A0A075B5P0 119 aa11.01□□□□□ -0.65
Lsm1-201ENSMUST00000038421 Gm11011D3Z3L9 86 aa11.01□□□□□ -0.65
Lsm1-201ENSMUST00000038421 Serp1Q9Z1W5 66 aa11.01□□□□□ -0.65
Lsm1-201ENSMUST00000038421 AtrQ9JKK8 2635 aa11□□□□□ -0.65
Lsm1-201ENSMUST00000038421 P06320 134 aa11□□□□□ -0.65
Lsm1-201ENSMUST00000038421 Pet100P0DJE0 76 aa11□□□□□ -0.65
Lsm1-201ENSMUST00000038421 Notch2O35516 2470 aa11□□□□□ -0.65
Lsm1-201ENSMUST00000038421 Sfta2E9PXB6 77 aa10.99□□□□□ -0.65
Lsm1-201ENSMUST00000038421 Gm7276Q3TYW4 209 aa10.99□□□□□ -0.65
Lsm1-201ENSMUST00000038421 Vpreb1P13372 142 aa10.98□□□□□ -0.65
Lsm1-201ENSMUST00000038421 Prr15lQ8JZM2 100 aa10.98□□□□□ -0.65
Lsm1-201ENSMUST00000038421 Sprr2jO70561 109 aa10.97□□□□□ -0.65
Lsm1-201ENSMUST00000038421 Notch1Q01705 2531 aa10.94□□□□□ -0.66
Lsm1-201ENSMUST00000038421 Cox6a2P43023 97 aa10.92□□□□□ -0.66
Lsm1-201ENSMUST00000038421 Q8BT88 171 aa10.92□□□□□ -0.66
Lsm1-201ENSMUST00000038421 BaalcQ8VHV1 145 aa10.92□□□□□ -0.66
Lsm1-201ENSMUST00000038421 Gm10401E9Q3K6 71 aa10.91□□□□□ -0.66
Lsm1-201ENSMUST00000038421 Gm10570F6VB42 170 aa10.91□□□□□ -0.66
Lsm1-201ENSMUST00000038421 C130032M10RikQ8C888 123 aa10.91□□□□□ -0.66
Lsm1-201ENSMUST00000038421 Dph3Q8K0W9 82 aa10.91□□□□□ -0.66
Lsm1-201ENSMUST00000038421 Itpr2Q9Z329 2701 aa10.9□□□□□ -0.66
Lsm1-201ENSMUST00000038421 A530084C06RikQ3UTW2 186 aa10.9□□□□□ -0.67
Lsm1-201ENSMUST00000038421 UqcrqQ9CQ69 82 aa10.9□□□□□ -0.67
Lsm1-201ENSMUST00000038421 AplnQ9R0R4 77 aa10.9□□□□□ -0.67
Lsm1-201ENSMUST00000038421 Gm7138L7N2C3 230 aa10.89□□□□□ -0.67
Lsm1-201ENSMUST00000038421 Gm5617Q91VN2 117 aa10.89□□□□□ -0.67
Lsm1-201ENSMUST00000038421 Gm3238W4VSP7 230 aa10.89□□□□□ -0.67
Lsm1-201ENSMUST00000038421 Phxr5P08399 672 aa10.89□□□□□ -0.67
Lsm1-201ENSMUST00000038421 Fam168bQ80XQ8 194 aa10.88□□□□□ -0.67
Lsm1-201ENSMUST00000038421 Spink8Q09TK9 105 aa10.87□□□□□ -0.67
Lsm1-201ENSMUST00000038421 6430550D23RikE9Q1X6 194 aa10.86□□□□□ -0.67
Lsm1-201ENSMUST00000038421 Defb40Q70KL2 73 aa10.86□□□□□ -0.67
Lsm1-201ENSMUST00000038421 Mrpl55Q9CZ83 127 aa10.86□□□□□ -0.67
Lsm1-201ENSMUST00000038421 Gm37389A0A0A6YW05 95 aa10.86□□□□□ -0.67
Lsm1-201ENSMUST00000038421 P84750 121 aa10.86□□□□□ -0.67
Lsm1-201ENSMUST00000038421 Mrpl34Q99N91 92 aa10.86□□□□□ -0.67
Lsm1-201ENSMUST00000038421 Dmac1Q9CQ00 111 aa10.85□□□□□ -0.67
Lsm1-201ENSMUST00000038421 PscaP57096 123 aa10.84□□□□□ -0.67
Lsm1-201ENSMUST00000038421 Gm44790A0A0N4SV91 103 aa10.83□□□□□ -0.68
Lsm1-201ENSMUST00000038421 Gm10337F7DEP7 55 aa10.83□□□□□ -0.68
Lsm1-201ENSMUST00000038421 Gm16485Q8C4B7 115 aa10.83□□□□□ -0.68
Lsm1-201ENSMUST00000038421 Stab1Q8R4Y4 2571 aa10.82□□□□□ -0.68
Lsm1-201ENSMUST00000038421 Col6a5A6H584 2640 aa10.8□□□□□ -0.68
Lsm1-201ENSMUST00000038421 Igkv8-19A0A0G2JFN8 121 aa10.8□□□□□ -0.68
Lsm1-201ENSMUST00000038421 Gm17521F6QAC8 156 aa10.8□□□□□ -0.68
Lsm1-201ENSMUST00000038421 Vpreb3D3Z6J4 130 aa10.8□□□□□ -0.68
Lsm1-201ENSMUST00000038421 Igkv3-4A0A140T8Q4 119 aa10.79□□□□□ -0.68
Lsm1-201ENSMUST00000038421 A930002H24RikQ8C8Y3 163 aa10.79□□□□□ -0.68
Lsm1-201ENSMUST00000038421 FlnbQ80X90 2602 aaKnown RBP10.78□□□□□ -0.68
Lsm1-201ENSMUST00000038421 Obox2E9PXV9 151 aa10.78□□□□□ -0.68
Lsm1-201ENSMUST00000038421 Wfdc6bF6ULY1 148 aa10.78□□□□□ -0.68
Lsm1-201ENSMUST00000038421 Defb12Q8K4N3 78 aa10.78□□□□□ -0.68
Lsm1-201ENSMUST00000038421 Gm11627A6PWP4 55 aa10.77□□□□□ -0.69
Lsm1-201ENSMUST00000038421 Sprr1aQ62266 144 aa10.77□□□□□ -0.69
Lsm1-201ENSMUST00000038421 Srrm2Q8BTI8 2703 aaKnown RBP10.76□□□□□ -0.69
Lsm1-201ENSMUST00000038421 Igkv3-12A0A140T8P0 119 aa10.76□□□□□ -0.69
Lsm1-201ENSMUST00000038421 Kmt2aP55200 3966 aa10.75□□□□□ -0.69
Lsm1-201ENSMUST00000038421 Gm16181B0V2H2 73 aa10.75□□□□□ -0.69
Lsm1-201ENSMUST00000038421 Ube2bP63147 152 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms