RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 CrygeQ03740 174 aa8.98□□□□□ -0.97
Nup88-201ENSMUST00000035283 Ufsp1Q9CZP0 217 aa8.98□□□□□ -0.97
Nup88-201ENSMUST00000035283 Tenm1Q9WTS4 2731 aa8.98□□□□□ -0.97
Nup88-201ENSMUST00000035283 Igkv3-1A0A075B5P1 119 aa8.97□□□□□ -0.97
Nup88-201ENSMUST00000035283 Igkv8-28A0A0G2JE47 121 aa8.96□□□□□ -0.97
Nup88-201ENSMUST00000035283 Tenm4Q3UHK6 2771 aa8.96□□□□□ -0.98
Nup88-201ENSMUST00000035283 A730009L09RikA0A1B0GS82 72 aa8.96□□□□□ -0.98
Nup88-201ENSMUST00000035283 9430015G10RikA2ASP7 199 aa8.96□□□□□ -0.98
Nup88-201ENSMUST00000035283 Cd164Q9R0L9 197 aa8.96□□□□□ -0.98
Nup88-201ENSMUST00000035283 Fbn1Q61554 2873 aaKnown RBP8.95□□□□□ -0.98
Nup88-201ENSMUST00000035283 Klk9Q32M27 251 aa8.95□□□□□ -0.98
Nup88-201ENSMUST00000035283 PolqQ8CGS6 2544 aa8.94□□□□□ -0.98
Nup88-201ENSMUST00000035283 Gm17577J3QNF7 156 aa8.94□□□□□ -0.98
Nup88-201ENSMUST00000035283 Elof1P60003 83 aa8.93□□□□□ -0.98
Nup88-201ENSMUST00000035283 Ndufc1Q9CQY9 76 aa8.93□□□□□ -0.98
Nup88-201ENSMUST00000035283 Gm17509Q9CZ61 145 aa8.93□□□□□ -0.98
Nup88-201ENSMUST00000035283 Defa27F2Z403 93 aa8.92□□□□□ -0.98
Nup88-201ENSMUST00000035283 H2al1aQ5M8Q2 105 aa8.92□□□□□ -0.98
Nup88-201ENSMUST00000035283 Smim29Q8R043 75 aa8.92□□□□□ -0.98
Nup88-201ENSMUST00000035283 Pde6gP09174 87 aa8.91□□□□□ -0.98
Nup88-201ENSMUST00000035283 Ighv2-2A0A075B5P8 116 aa8.91□□□□□ -0.98
Nup88-201ENSMUST00000035283 P01821 116 aa8.91□□□□□ -0.98
Nup88-201ENSMUST00000035283 A330070K13RikQ8CA53 115 aa8.91□□□□□ -0.98
Nup88-201ENSMUST00000035283 Ighv8-13A0A075B5Y0 101 aa8.9□□□□□ -0.98
Nup88-201ENSMUST00000035283 Igkv4-92A0A0B4J1I2 117 aa8.9□□□□□ -0.98
Nup88-201ENSMUST00000035283 Igkv1-122A0A140T8M9 119 aa8.9□□□□□ -0.98
Nup88-201ENSMUST00000035283 Snhg11Q4G0K9 87 aa8.9□□□□□ -0.99
Nup88-201ENSMUST00000035283 Cox7b2Q9D2H1 82 aa8.9□□□□□ -0.99
Nup88-201ENSMUST00000035283 Vpreb2P13373 142 aa8.89□□□□□ -0.99
Nup88-201ENSMUST00000035283 CicQ924A2 2510 aa8.88□□□□□ -0.99
Nup88-201ENSMUST00000035283 Cmc4Q61908 68 aa8.87□□□□□ -0.99
Nup88-201ENSMUST00000035283 Serp1Q9Z1W5 66 aa8.87□□□□□ -0.99
Nup88-201ENSMUST00000035283 AtrQ9JKK8 2635 aa8.87□□□□□ -0.99
Nup88-201ENSMUST00000035283 Cdk2ap2Q9CPY4 127 aa8.87□□□□□ -0.99
Nup88-201ENSMUST00000035283 Igkv3-2A0A075B5P0 119 aa8.86□□□□□ -0.99
Nup88-201ENSMUST00000035283 Vpreb1P13372 142 aa8.86□□□□□ -0.99
Nup88-201ENSMUST00000035283 Gm11011D3Z3L9 86 aa8.86□□□□□ -0.99
Nup88-201ENSMUST00000035283 Camk2n2Q78WH7 79 aa8.86□□□□□ -0.99
Nup88-201ENSMUST00000035283 BC048502Q80Y74 154 aa8.86□□□□□ -0.99
Nup88-201ENSMUST00000035283 P06320 134 aa8.85□□□□□ -0.99
Nup88-201ENSMUST00000035283 Pou2af1Q64693 256 aa8.85□□□□□ -0.99
Nup88-201ENSMUST00000035283 Reg3bP35230 175 aa8.85□□□□□ -0.99
Nup88-201ENSMUST00000035283 BaalcQ8VHV1 145 aa8.85□□□□□ -0.99
Nup88-201ENSMUST00000035283 A0A286YE02 88 aa8.84□□□□□ -0.99
Nup88-201ENSMUST00000035283 Erdr1J3QMM0 206 aa8.84□□□□□ -0.99
Nup88-201ENSMUST00000035283 PtprqP0C5E4 2300 aa8.84□□□□□ -0.99
Nup88-201ENSMUST00000035283 Sfta2E9PXB6 77 aa8.83□□□□□ -1
Nup88-201ENSMUST00000035283 Pet100P0DJE0 76 aa8.83□□□□□ -1
Nup88-201ENSMUST00000035283 Sprr4Q8CGN8 76 aa8.83□□□□□ -1
Nup88-201ENSMUST00000035283 Notch1Q01705 2531 aa8.83□□□□□ -1
Nup88-201ENSMUST00000035283 Trav14-1A0A0G2JF94 121 aa8.82□□□□□ -1
Nup88-201ENSMUST00000035283 Prr15lQ8JZM2 100 aa8.82□□□□□ -1
Nup88-201ENSMUST00000035283 Dph3Q8K0W9 82 aa8.82□□□□□ -1
Nup88-201ENSMUST00000035283 Q8BT88 171 aa8.81□□□□□ -1
Nup88-201ENSMUST00000035283 A530084C06RikQ3UTW2 186 aa8.81□□□□□ -1
Nup88-201ENSMUST00000035283 Gm5617Q91VN2 117 aa8.8□□□□□ -1
Nup88-201ENSMUST00000035283 Gm10570F6VB42 170 aa8.8□□□□□ -1
Nup88-201ENSMUST00000035283 Sprr2jO70561 109 aa8.8□□□□□ -1
Nup88-201ENSMUST00000035283 Gm7276Q3TYW4 209 aa8.8□□□□□ -1
Nup88-201ENSMUST00000035283 Notch2O35516 2470 aa8.8□□□□□ -1
Nup88-201ENSMUST00000035283 Gm10401E9Q3K6 71 aa8.79□□□□□ -1
Nup88-201ENSMUST00000035283 C130032M10RikQ8C888 123 aa8.77□□□□□ -1.01
Nup88-201ENSMUST00000035283 UqcrqQ9CQ69 82 aa8.77□□□□□ -1.01
Nup88-201ENSMUST00000035283 Itpr2Q9Z329 2701 aa8.76□□□□□ -1.01
Nup88-201ENSMUST00000035283 6430550D23RikE9Q1X6 194 aa8.76□□□□□ -1.01
Nup88-201ENSMUST00000035283 Cox6a2P43023 97 aa8.76□□□□□ -1.01
Nup88-201ENSMUST00000035283 Gm10337F7DEP7 55 aa8.75□□□□□ -1.01
Nup88-201ENSMUST00000035283 Mrpl55Q9CZ83 127 aa8.75□□□□□ -1.01
Nup88-201ENSMUST00000035283 Spink8Q09TK9 105 aa8.74□□□□□ -1.01
Nup88-201ENSMUST00000035283 Col6a5A6H584 2640 aa8.74□□□□□ -1.01
Nup88-201ENSMUST00000035283 Defb40Q70KL2 73 aa8.73□□□□□ -1.01
Nup88-201ENSMUST00000035283 Fam168bQ80XQ8 194 aa8.73□□□□□ -1.01
Nup88-201ENSMUST00000035283 Csmd3Q80T79 3707 aa8.73□□□□□ -1.01
Nup88-201ENSMUST00000035283 Gm7138L7N2C3 230 aa8.72□□□□□ -1.01
Nup88-201ENSMUST00000035283 Gm3238W4VSP7 230 aa8.72□□□□□ -1.01
Nup88-201ENSMUST00000035283 Mrpl34Q99N91 92 aa8.72□□□□□ -1.01
Nup88-201ENSMUST00000035283 Phxr5P08399 672 aa8.71□□□□□ -1.01
Nup88-201ENSMUST00000035283 Stab1Q8R4Y4 2571 aa8.71□□□□□ -1.02
Nup88-201ENSMUST00000035283 Kmt2aP55200 3966 aa8.71□□□□□ -1.02
Nup88-201ENSMUST00000035283 Gm44790A0A0N4SV91 103 aa8.71□□□□□ -1.02
Nup88-201ENSMUST00000035283 FlnbQ80X90 2602 aaKnown RBP8.71□□□□□ -1.02
Nup88-201ENSMUST00000035283 PscaP57096 123 aa8.7□□□□□ -1.02
Nup88-201ENSMUST00000035283 AplnQ9R0R4 77 aa8.7□□□□□ -1.02
Nup88-201ENSMUST00000035283 P84750 121 aa8.7□□□□□ -1.02
Nup88-201ENSMUST00000035283 Srrm2Q8BTI8 2703 aaKnown RBP8.69□□□□□ -1.02
Nup88-201ENSMUST00000035283 Defb12Q8K4N3 78 aa8.69□□□□□ -1.02
Nup88-201ENSMUST00000035283 Hivep1Q03172 2688 aa8.68□□□□□ -1.02
Nup88-201ENSMUST00000035283 Gm37389A0A0A6YW05 95 aa8.68□□□□□ -1.02
Nup88-201ENSMUST00000035283 Igkv8-19A0A0G2JFN8 121 aa8.68□□□□□ -1.02
Nup88-201ENSMUST00000035283 Dmac1Q9CQ00 111 aa8.68□□□□□ -1.02
Nup88-201ENSMUST00000035283 Dnah7bL7N1Y0 4068 aa8.65□□□□□ -1.02
Nup88-201ENSMUST00000035283 Igkv3-4A0A140T8Q4 119 aa8.65□□□□□ -1.02
Nup88-201ENSMUST00000035283 Gm17521F6QAC8 156 aa8.65□□□□□ -1.02
Nup88-201ENSMUST00000035283 Gm16485Q8C4B7 115 aa8.65□□□□□ -1.02
Nup88-201ENSMUST00000035283 Defa28D3Z1V9 94 aa8.64□□□□□ -1.03
Nup88-201ENSMUST00000035283 A930002H24RikQ8C8Y3 163 aa8.64□□□□□ -1.03
Nup88-201ENSMUST00000035283 Vpreb3D3Z6J4 130 aa8.64□□□□□ -1.03
Nup88-201ENSMUST00000035283 Coa6Q8BGD8 79 aa8.64□□□□□ -1.03
Nup88-201ENSMUST00000035283 H2al1bA0A087WP11 105 aa8.63□□□□□ -1.03
Nup88-201ENSMUST00000035283 H2al1kJ3QP08 105 aa8.63□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms