RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Gm11562A0PK51 136 aa11,45□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Hsbp1l1B2RXB2 72 aa11,45□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Cox7bP56393 80 aa11,45□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Cd164Q9R0L9 197 aa11,45□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Vpreb1P13372 142 aa11,43□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Q9DAA7 145 aa11,42□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Timm10bQ9WV96 100 aa11,42□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Igkv3-10A0A0G2JGN0 119 aa11,41□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Gm10139O88245 57 aa11,41□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Wfdc13Q5DQQ6 81 aa11,41□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Ssbp1Q9CYR0 152 aaKnown RBP11,41□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Defa28D3Z1V9 94 aa11,4□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Spata45Q9CVW4 97 aa11,4□□□□□ -0,58
Ttc39b-201ENSMUST00000030205 Mustn1Q99JI1 82 aa11,39□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Fat4Q2PZL6 4981 aa11,39□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Fam240aJ3QNP9 97 aa11,38□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Spaca4Q80ZQ0 127 aa11,38□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 SmagpQ99KC7 97 aa11,38□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Mrps10Q80ZK0 160 aaKnown RBP11,37□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Igkv8-26A0A075B5N5 123 aa11,36□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Igkv8-18A0A0B4J1J3 123 aa11,36□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Gm5767A0A0J9YTU8 78 aa11,36□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Gm42674D3YUT9 64 aa11,36□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 BC048502Q80Y74 154 aa11,36□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Slamf6Q9ET39 351 aa11,36□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 A930004D18RikQ8C8W7 157 aa11,35□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 2310034G01RikA0A286YDL3 209 aa11,34□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Gm10320E9PW43 113 aa11,34□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Ndufc2Q9CQ54 120 aa11,34□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Sostdc1Q9CQN4 206 aa11,34□□□□□ -0,59
Ttc39b-201ENSMUST00000030205 Cypt14J3QPF7 87 aa11,33□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 Gm19402J3QJV4 266 aa11,32□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 Wdr38Q9D994 303 aa11,32□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 Psmb2Q9R1P3 201 aa11,32□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 Gpx1P11352 201 aa11,31□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 PpdpfQ9CR37 115 aa11,31□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 2310057N15RikQ9D6T8 200 aa11,31□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 Gm11020F6ZGD5 61 aa11,3□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 Tcl1b3P56842 122 aa11,3□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 Cks1brtQ3UNC9 96 aa11,3□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 4930442H23RikQ9D5G7 103 aa11,3□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 Rps29P62274 56 aa11,29□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 Crct1Q6PAI5 102 aa11,29□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 Dph3Q8K0W9 82 aa11,29□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 Gm5153P01627 120 aa11,28□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 LorP18165 486 aa11,28□□□□□ -0,6
Ttc39b-201ENSMUST00000030205 Gm9047B9EJX3 177 aa11,27□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 Gm9805F6YK59 57 aa11,27□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 1700010B08RikQ9DAI7 102 aa11,27□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 Trav4-3A0A0B4J1K1 110 aa11,26□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 Gm9821Q8K076 103 aa11,25□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 Igkv1-117A0A140T8M0 119 aa11,24□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 Hist1h2bmP10854 126 aa11,24□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 Pmp2P24526 132 aa11,24□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 Hist1h2bhQ64478 126 aa11,24□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 Hist2h2bbQ64525 126 aa11,24□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 Hist1h2bcQ6ZWY9 126 aaKnown RBP11,24□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 Csdc2Q91YQ3 154 aa11,24□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 Ccl25O35903 144 aa11,23□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 S100a8P27005 89 aa11,23□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 Rgs21V9GXQ3 152 aa11,22□□□□□ -0,61
Ttc39b-201ENSMUST00000030205 E130218I03RikA0A0U1RNU5 63 aa11,2□□□□□ -0,62
Ttc39b-201ENSMUST00000030205 Trav12-3A0A075B648 115 aa11,19□□□□□ -0,62
Ttc39b-201ENSMUST00000030205 Gm28305F6U473 122 aa11,19□□□□□ -0,62
Ttc39b-201ENSMUST00000030205 Gm7276Q3TYW4 209 aa11,19□□□□□ -0,62
Ttc39b-201ENSMUST00000030205 Gm29289A0A087WPY7 166 aa11,18□□□□□ -0,62
Ttc39b-201ENSMUST00000030205 Gm10770F7D043 238 aa11,17□□□□□ -0,62
Ttc39b-201ENSMUST00000030205 Ighv1-62-2A0A0A6YXZ4 119 aa11,16□□□□□ -0,62
Ttc39b-201ENSMUST00000030205 Rpl32-psP17932 135 aa11,16□□□□□ -0,62
Ttc39b-201ENSMUST00000030205 Gm10577Q3UDV9 132 aa11,16□□□□□ -0,62
Ttc39b-201ENSMUST00000030205 Trav13n-2A0A0G2JF93 110 aa11,14□□□□□ -0,63
Ttc39b-201ENSMUST00000030205 Igkv1-122A0A140T8M9 119 aa11,14□□□□□ -0,63
Ttc39b-201ENSMUST00000030205 Sec61bQ9CQS8 96 aaKnown RBP11,14□□□□□ -0,63
Ttc39b-201ENSMUST00000030205 Scgb1b10A0A087WPW0 93 aa11,13□□□□□ -0,63
Ttc39b-201ENSMUST00000030205 Cox8bP48772 70 aa11,13□□□□□ -0,63
Ttc39b-201ENSMUST00000030205 A930002H24RikQ8C8Y3 163 aa11,13□□□□□ -0,63
Ttc39b-201ENSMUST00000030205 Plac1Q9JI83 173 aa11,12□□□□□ -0,63
Ttc39b-201ENSMUST00000030205 Gm10061D3Z714 54 aa11,11□□□□□ -0,63
Ttc39b-201ENSMUST00000030205 Gm2310J3QNJ2 377 aa11,11□□□□□ -0,63
Ttc39b-201ENSMUST00000030205 Rnf213E9Q555 5152 aaKnown RBP11,1□□□□□ -0,63
Ttc39b-201ENSMUST00000030205 Elof1P60003 83 aa11,1□□□□□ -0,63
Ttc39b-201ENSMUST00000030205 Gm45753A0A1C7CYU8 86 aa11,09□□□□□ -0,63
Ttc39b-201ENSMUST00000030205 Gm44965A0A0N4SVR3 59 aa11,07□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Lst1O08843 95 aa11,07□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Lamtor3O88653 124 aa11,07□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Triap1Q9D8Z2 76 aa11,06□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Defb37Q7TMD2 62 aa11,05□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Defb29Q8BGW9 78 aa11,05□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 5930422O12RikQ8C4Y4 123 aa11,05□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Igkv4-58A0A0G2JGI6 119 aa11,04□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Krtap4-2B1AQ85 167 aa11,04□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Tmem243B2RVB9 118 aa11,04□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Hint1P70349 126 aaKnown RBP11,04□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 A830005F24RikQ8BRT5 167 aa11,04□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Krtap15-1Q9QZU5 150 aa11,04□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Timm17bQ9Z0V7 172 aa11,04□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Vpreb3D3Z6J4 130 aa11,03□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 BC107364E9Q5A2 140 aa11,03□□□□□ -0,64
Ttc39b-201ENSMUST00000030205 Glrp1E9Q9S8 174 aa11,02□□□□□ -0,65
Ttc39b-201ENSMUST00000030205 MalO09198 153 aa11,02□□□□□ -0,65
Retrieved 100 of 22,080 RNA–protein pairs in 68,7 ms