RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Gm7276Q3TYW4 209 aa13.03□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 Cdk2ap2Q9CPY4 127 aa13.03□□□□□ -0.32
Ccdc34-201ENSMUST00000028580 Igkv1-88A0A140T8N1 120 aa13.02□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Rbm3O89086 153 aaKnown RBP13.02□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 D130052B06RikQ3UW13 202 aa13.02□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 A730071L15RikQ8C4X0 137 aa13.02□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Kmt2aP55200 3966 aa13.02□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Wfdc17Q5SSJ1 76 aa13.01□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Nsd1O88491 2588 aaKnown RBP13.01□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Cd164Q9R0L9 197 aa13.01□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Fam19a1Q7TPG8 133 aa12.99□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Stab1Q8R4Y4 2571 aa12.99□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Ighv2-2A0A075B5P8 116 aa12.98□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 P01821 116 aa12.98□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Scgb1b2O35176 93 aa12.98□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 4930518I15RikQ3V2W7 57 aa12.98□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Defa2P28309 93 aa12.97□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 6430550D23RikE9Q1X6 194 aa12.97□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Gm7138L7N2C3 230 aa12.96□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Defb10Q8R2I8 73 aa12.96□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Gm3238W4VSP7 230 aa12.96□□□□□ -0.33
Ccdc34-201ENSMUST00000028580 Gm3618D3Z4P5 127 aa12.95□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Gm2916Q9D9B9 127 aa12.95□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Spata3Q9D9T6 193 aa12.95□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Hivep1Q03172 2688 aa12.95□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 MplkipQ9D011 178 aa12.94□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Defa7P50705 93 aa12.92□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Pou2af1Q64693 256 aa12.92□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Igkv8-28A0A0G2JE47 121 aa12.91□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Gm36176A0A1W2P8D5 158 aa12.91□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Tmem243B2RVB9 118 aa12.9□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Gm20726G3UX18 150 aa12.9□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Naa38Q9D2U5 125 aa12.9□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Dnah3Q8BW94 4083 aa12.9□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Vpreb2P13373 142 aa12.9□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Defb37Q7TMD2 62 aa12.9□□□□□ -0.34
Ccdc34-201ENSMUST00000028580 Igkv1-110A0A0B4J1I0 119 aa12.89□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 Ndufc1Q9CQY9 76 aa12.89□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 GhrhP16043 103 aa12.88□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 Sprr1aQ62266 144 aa12.88□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 Gm11627A6PWP4 55 aa12.87□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 Gm16485Q8C4B7 115 aa12.87□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 Smim29Q8R043 75 aa12.87□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 Tmem258P61166 79 aa12.86□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 A830005F24RikQ8BRT5 167 aa12.86□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 Gm17689B3GLJ4 109 aa12.85□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 ApcQ61315 2845 aa12.85□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 Defa21Q8C1P2 93 aa12.85□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 Fam229bQ8CF36 80 aa12.85□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 Dmac1Q9CQ00 111 aa12.84□□□□□ -0.35
Ccdc34-201ENSMUST00000028580 Srrm2Q8BTI8 2703 aaKnown RBP12.83□□□□□ -0.36
Ccdc34-201ENSMUST00000028580 PtprqP0C5E4 2300 aa12.81□□□□□ -0.36
Ccdc34-201ENSMUST00000028580 Igkv1-122A0A140T8M9 119 aa12.81□□□□□ -0.36
Ccdc34-201ENSMUST00000028580 Gm19935A0A1B0GSF9 52 aa12.81□□□□□ -0.36
Ccdc34-201ENSMUST00000028580 Sprr2jO70561 109 aa12.81□□□□□ -0.36
Ccdc34-201ENSMUST00000028580 Rps28P62858 69 aaKnown RBP12.81□□□□□ -0.36
Ccdc34-201ENSMUST00000028580 P84750 121 aa12.81□□□□□ -0.36
Ccdc34-201ENSMUST00000028580 Wfdc6bF6ULY1 148 aa12.79□□□□□ -0.36
Ccdc34-201ENSMUST00000028580 Sfta2E9PXB6 77 aa12.78□□□□□ -0.36
Ccdc34-201ENSMUST00000028580 Prol1E9PYQ4 312 aa12.77□□□□□ -0.36
Ccdc34-201ENSMUST00000028580 Col6a5A6H584 2640 aa12.77□□□□□ -0.36
Ccdc34-201ENSMUST00000028580 Defa23Q5G866 93 aa12.76□□□□□ -0.37
Ccdc34-201ENSMUST00000028580 A930002H24RikQ8C8Y3 163 aa12.76□□□□□ -0.37
Ccdc34-201ENSMUST00000028580 Fam19a3Q7TPG6 132 aa12.75□□□□□ -0.37
Ccdc34-201ENSMUST00000028580 Cox6a2P43023 97 aa12.74□□□□□ -0.37
Ccdc34-201ENSMUST00000028580 Gm7137J3QMW1 236 aa12.73□□□□□ -0.37
Ccdc34-201ENSMUST00000028580 A330070K13RikQ8CA53 115 aa12.73□□□□□ -0.37
Ccdc34-201ENSMUST00000028580 Obox2E9PXV9 151 aa12.72□□□□□ -0.37
Ccdc34-201ENSMUST00000028580 Defa4P28311 92 aa12.72□□□□□ -0.37
Ccdc34-201ENSMUST00000028580 Fam168bQ80XQ8 194 aa12.72□□□□□ -0.37
Ccdc34-201ENSMUST00000028580 B230307C23RikQ8BLB2 64 aa12.72□□□□□ -0.37
Ccdc34-201ENSMUST00000028580 Igkv3-12A0A140T8P0 119 aa12.71□□□□□ -0.37
Ccdc34-201ENSMUST00000028580 A0A286YE02 88 aa12.71□□□□□ -0.37
Ccdc34-201ENSMUST00000028580 Sslp1Q3UN54 99 aa12.71□□□□□ -0.38
Ccdc34-201ENSMUST00000028580 Notch1Q01705 2531 aa12.7□□□□□ -0.38
Ccdc34-201ENSMUST00000028580 AW011738F6S7Q2 159 aa12.69□□□□□ -0.38
Ccdc34-201ENSMUST00000028580 P06320 134 aa12.69□□□□□ -0.38
Ccdc34-201ENSMUST00000028580 Igkv3-2A0A075B5P0 119 aa12.68□□□□□ -0.38
Ccdc34-201ENSMUST00000028580 Gm11011D3Z3L9 86 aa12.66□□□□□ -0.38
Ccdc34-201ENSMUST00000028580 Gm37389A0A0A6YW05 95 aa12.66□□□□□ -0.38
Ccdc34-201ENSMUST00000028580 Vpreb1P13372 142 aa12.66□□□□□ -0.38
Ccdc34-201ENSMUST00000028580 BikO70337 150 aa12.63□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 Vpreb3D3Z6J4 130 aa12.63□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 Dnah1E9Q8T7 4250 aa12.62□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 U90926O08546 118 aa12.61□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 PscaP57096 123 aa12.61□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 Gm37013Q8K491 104 aa12.61□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 Fam104aA2A6P4 185 aa12.61□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 Fam19a5Q91WE9 132 aa12.61□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 Dnah17Q69Z23 4481 aa12.61□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 Gm12353A2AGJ4 60 aa12.6□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 Samd13D3YUG0 102 aa12.6□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 Gm10401E9Q3K6 71 aa12.6□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 C130032M10RikQ8C888 123 aa12.58□□□□□ -0.39
Ccdc34-201ENSMUST00000028580 Dnah10D3YYQ8 4591 aa12.58□□□□□ -0.4
Ccdc34-201ENSMUST00000028580 Dnah14A0A140LIJ4 4489 aa12.58□□□□□ -0.4
Ccdc34-201ENSMUST00000028580 Igkv3-4A0A140T8Q4 119 aa12.58□□□□□ -0.4
Ccdc34-201ENSMUST00000028580 Mrpl34Q99N91 92 aa12.58□□□□□ -0.4
Ccdc34-201ENSMUST00000028580 BaalcQ8VHV1 145 aa12.57□□□□□ -0.4
Ccdc34-201ENSMUST00000028580 Dnah6E9Q0B6 4144 aa12.57□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 153.7 ms