RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Defa21Q8C1P2 93 aa12.21□□□□□ -0.45
Ccdc3-201ENSMUST00000027988 FlnbQ80X90 2602 aaKnown RBP12.21□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Lamtor3O88653 124 aa12.21□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Dnah10D3YYQ8 4591 aa12.21□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Gm17509Q9CZ61 145 aa12.2□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Reg3bP35230 175 aa12.19□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 9530003J23RikQ8BM26 151 aa12.19□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Gm17689B3GLJ4 109 aa12.18□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Cd164Q9R0L9 197 aa12.18□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Phxr5P08399 672 aa12.18□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Defa4P28311 92 aa12.18□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Serp2Q6TAW2 65 aa12.18□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 VwfQ8CIZ8 2813 aa12.17□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Igkv4-92A0A0B4J1I2 117 aa12.16□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Gm17577J3QNF7 156 aa12.16□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Dnah7bL7N1Y0 4068 aa12.16□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Igkv8-34A0A0G2JDU0 121 aa12.15□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Gm7137J3QMW1 236 aa12.15□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Tmem243B2RVB9 118 aa12.15□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Cox7b2Q9D2H1 82 aa12.15□□□□□ -0.46
Ccdc3-201ENSMUST00000027988 Ubl5Q9EPV8 73 aa12.14□□□□□ -0.47
Ccdc3-201ENSMUST00000027988 9430015G10RikA2ASP7 199 aa12.13□□□□□ -0.47
Ccdc3-201ENSMUST00000027988 Igkv1-110A0A0B4J1I0 119 aa12.12□□□□□ -0.47
Ccdc3-201ENSMUST00000027988 Gm36176A0A1W2P8D5 158 aa12.12□□□□□ -0.47
Ccdc3-201ENSMUST00000027988 Sprr4Q8CGN8 76 aa12.12□□□□□ -0.47
Ccdc3-201ENSMUST00000027988 Elof1P60003 83 aa12.11□□□□□ -0.47
Ccdc3-201ENSMUST00000027988 Nsd1O88491 2588 aaKnown RBP12.1□□□□□ -0.47
Ccdc3-201ENSMUST00000027988 Camk2n2Q78WH7 79 aa12.1□□□□□ -0.47
Ccdc3-201ENSMUST00000027988 Defa23Q5G866 93 aa12.09□□□□□ -0.47
Ccdc3-201ENSMUST00000027988 Fam19a3Q7TPG6 132 aa12.09□□□□□ -0.47
Ccdc3-201ENSMUST00000027988 Igkv8-28A0A0G2JE47 121 aa12.09□□□□□ -0.47
Ccdc3-201ENSMUST00000027988 AplnQ9R0R4 77 aa12.09□□□□□ -0.47
Ccdc3-201ENSMUST00000027988 Dnah14A0A140LIJ4 4489 aa12.08□□□□□ -0.48
Ccdc3-201ENSMUST00000027988 Rbm3O89086 153 aaKnown RBP12.07□□□□□ -0.48
Ccdc3-201ENSMUST00000027988 A830005F24RikQ8BRT5 167 aa12.07□□□□□ -0.48
Ccdc3-201ENSMUST00000027988 Ighv2-5A0A0A6YY69 116 aa12.07□□□□□ -0.48
Ccdc3-201ENSMUST00000027988 Inafm2A0A1L1STD6 152 aa12.07□□□□□ -0.48
Ccdc3-201ENSMUST00000027988 Fn1P11276 2477 aaKnown RBP12.06□□□□□ -0.48
Ccdc3-201ENSMUST00000027988 Igkv1-122A0A140T8M9 119 aa12.06□□□□□ -0.48
Ccdc3-201ENSMUST00000027988 E130114P18RikF6S0S7 154 aa12.06□□□□□ -0.48
Ccdc3-201ENSMUST00000027988 Trav14-1A0A0G2JF94 121 aa12.05□□□□□ -0.48
Ccdc3-201ENSMUST00000027988 Vpreb2P13373 142 aa12.03□□□□□ -0.48
Ccdc3-201ENSMUST00000027988 Csmd3Q80T79 3707 aa12.02□□□□□ -0.48
Ccdc3-201ENSMUST00000027988 A330070K13RikQ8CA53 115 aa12.02□□□□□ -0.49
Ccdc3-201ENSMUST00000027988 9530053A07RikE9PVG8 2581 aa12.02□□□□□ -0.49
Ccdc3-201ENSMUST00000027988 Pou2af1Q64693 256 aa12.02□□□□□ -0.49
Ccdc3-201ENSMUST00000027988 Dnah6E9Q0B6 4144 aa12.01□□□□□ -0.49
Ccdc3-201ENSMUST00000027988 Cdk2ap2Q9CPY4 127 aa12.01□□□□□ -0.49
Ccdc3-201ENSMUST00000027988 B230307C23RikQ8BLB2 64 aa12□□□□□ -0.49
Ccdc3-201ENSMUST00000027988 Dnah1E9Q8T7 4250 aa11.99□□□□□ -0.49
Ccdc3-201ENSMUST00000027988 Fam168bQ80XQ8 194 aa11.98□□□□□ -0.49
Ccdc3-201ENSMUST00000027988 BC048502Q80Y74 154 aa11.98□□□□□ -0.49
Ccdc3-201ENSMUST00000027988 A0A286YE02 88 aa11.98□□□□□ -0.49
Ccdc3-201ENSMUST00000027988 Smlr1J3QMJ4 66 aa11.98□□□□□ -0.49
Ccdc3-201ENSMUST00000027988 Igkv3-2A0A075B5P0 119 aa11.96□□□□□ -0.5
Ccdc3-201ENSMUST00000027988 Tmem258P61166 79 aa11.96□□□□□ -0.5
Ccdc3-201ENSMUST00000027988 Gm7276Q3TYW4 209 aa11.95□□□□□ -0.5
Ccdc3-201ENSMUST00000027988 BikO70337 150 aa11.94□□□□□ -0.5
Ccdc3-201ENSMUST00000027988 Gm16485Q8C4B7 115 aa11.94□□□□□ -0.5
Ccdc3-201ENSMUST00000027988 GhrhP16043 103 aa11.94□□□□□ -0.5
Ccdc3-201ENSMUST00000027988 Dnah17Q69Z23 4481 aa11.92□□□□□ -0.5
Ccdc3-201ENSMUST00000027988 Gm5617Q91VN2 117 aa11.92□□□□□ -0.5
Ccdc3-201ENSMUST00000027988 Ighv2-2A0A075B5P8 116 aa11.92□□□□□ -0.5
Ccdc3-201ENSMUST00000027988 P01821 116 aa11.92□□□□□ -0.5
Ccdc3-201ENSMUST00000027988 Pde6gP09174 87 aa11.92□□□□□ -0.5
Ccdc3-201ENSMUST00000027988 P84750 121 aa11.9□□□□□ -0.5
Ccdc3-201ENSMUST00000027988 Gm16181B0V2H2 73 aa11.89□□□□□ -0.51
Ccdc3-201ENSMUST00000027988 SnurfQ9WU12 71 aa11.89□□□□□ -0.51
Ccdc3-201ENSMUST00000027988 Gm19935A0A1B0GSF9 52 aa11.88□□□□□ -0.51
Ccdc3-201ENSMUST00000027988 6430550D23RikE9Q1X6 194 aa11.87□□□□□ -0.51
Ccdc3-201ENSMUST00000027988 Sprr1aQ62266 144 aa11.87□□□□□ -0.51
Ccdc3-201ENSMUST00000027988 Rps28P62858 69 aaKnown RBP11.86□□□□□ -0.51
Ccdc3-201ENSMUST00000027988 Sslp1Q3UN54 99 aa11.85□□□□□ -0.51
Ccdc3-201ENSMUST00000027988 TgO08710 2766 aa11.85□□□□□ -0.51
Ccdc3-201ENSMUST00000027988 Sfta2E9PXB6 77 aa11.85□□□□□ -0.51
Ccdc3-201ENSMUST00000027988 Gm11011D3Z3L9 86 aa11.83□□□□□ -0.51
Ccdc3-201ENSMUST00000027988 P06320 134 aa11.83□□□□□ -0.51
Ccdc3-201ENSMUST00000027988 Sprr2jO70561 109 aa11.83□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Megf8P60882 2789 aa11.83□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Cox6a2P43023 97 aa11.83□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Dmac1Q9CQ00 111 aa11.83□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Ndufc1Q9CQY9 76 aa11.82□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 C130032M10RikQ8C888 123 aa11.82□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 PscaP57096 123 aa11.81□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Brk1Q91VR8 75 aa11.81□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Prr15lQ8JZM2 100 aa11.8□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Fam19a5Q91WE9 132 aa11.8□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 HrnrQ8VHD8 2496 aa11.8□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Wfdc6bF6ULY1 148 aa11.8□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Vpreb1P13372 142 aa11.8□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Gm9508A0A1W2P7W0 230 aa11.79□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Wfdc17Q5SSJ1 76 aa11.79□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Samd13D3YUG0 102 aa11.79□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Gm11627A6PWP4 55 aa11.78□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Defb40Q70KL2 73 aa11.78□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 Igkv3-12A0A140T8P0 119 aa11.77□□□□□ -0.52
Ccdc3-201ENSMUST00000027988 A930002H24RikQ8C8Y3 163 aa11.76□□□□□ -0.53
Ccdc3-201ENSMUST00000027988 Gm44790A0A0N4SV91 103 aa11.75□□□□□ -0.53
Ccdc3-201ENSMUST00000027988 Obox2E9PXV9 151 aa11.75□□□□□ -0.53
Ccdc3-201ENSMUST00000027988 Q8BT88 171 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 76 ms